Jatropha Genome Database

JcCA0311331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311331.10 - phase: 0 
         (312 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013999 BRASSINAZOLE-RESISTANT 1 protein, putative              414   e-116
29646.m001062 BRASSINAZOLE-RESISTANT 1 protein, putative              267   6e-72
30026.m001485 BRASSINAZOLE-RESISTANT 2 protein, putative               98   4e-21
29827.m002636 Beta-amylase, putative                                   64   1e-10
30075.m001185 BRASSINAZOLE-RESISTANT 1 protein, putative               62   3e-10
30174.m009027 Beta-amylase, putative                                   59   3e-09
29820.m001005 conserved hypothetical protein                           54   1e-07

>30170.m013999 BRASSINAZOLE-RESISTANT 1 protein, putative
          Length = 321

 Score =  414 bits (1063), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/321 (70%), Positives = 236/321 (73%), Gaps = 9/321 (2%)

Query: 1   MTSDGATSTSAAP---RRKPSWXXXXXXXXXXXXXXAIAAKIFAGLRAQGNYNLPKHCDN 57
           MTSDGATSTSAA    RRKPSW              AIAAKIF+GLRAQGNYNLPKHCDN
Sbjct: 1   MTSDGATSTSAAAAAARRKPSWRERENNRRRERRRRAIAAKIFSGLRAQGNYNLPKHCDN 60

Query: 58  NEVLKALCSEAGWVVEDDGTTYRKGCKPPPIDIVGTSARITXXXXXXXXXXXXXXXXXXX 117
           NEVLKALCSEAGWVVEDDGTTYRKGC+PPPIDIVGTSARIT                   
Sbjct: 61  NEVLKALCSEAGWVVEDDGTTYRKGCRPPPIDIVGTSARITPYSSQNPSPLSSAFPSPIP 120

Query: 118 XXXXXXXXXXXXXXXRVD---NNTPFNLLPFLQNAIPSSLPPLRISNSAPVXXXXXXXXX 174
                          R D   NN   ++LPFLQNAIP+SLPPLRISNSAPV         
Sbjct: 121 SYQVSPSSSSFPSPTRGDNNHNNAASSILPFLQNAIPASLPPLRISNSAPVTPPLSSPTS 180

Query: 175 XXXXXXXNWEFIAKQSMASLNYPFCAASAPASPTHRQFHAPATIPECDESDTSTVESGQW 234
                  NWEFIAKQSMAS NYPF A SAPASPTHRQFHAPATIPECDESD+STVESGQW
Sbjct: 181 RNPKPIPNWEFIAKQSMASFNYPFYAVSAPASPTHRQFHAPATIPECDESDSSTVESGQW 240

Query: 235 ISFQKFAPSM-AAMPTSPTYNLVKPVAGQILSGNVIQENGRSMEFEF--GSVQVKPWEGE 291
           ISFQKF PSM AAMPTSPTYNL+KPVA QILS NVI+ENGRSMEFEF  G+ QVKPWEGE
Sbjct: 241 ISFQKFGPSMAAAMPTSPTYNLMKPVAEQILSSNVIKENGRSMEFEFGNGNGQVKPWEGE 300

Query: 292 RIHEIGLDDLELTLGNGKARS 312
           RIHE+GLDDLELTLGNGKARS
Sbjct: 301 RIHEVGLDDLELTLGNGKARS 321


>29646.m001062 BRASSINAZOLE-RESISTANT 1 protein, putative
          Length = 317

 Score =  267 bits (682), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 153/325 (47%), Positives = 191/325 (58%), Gaps = 21/325 (6%)

Query: 1   MTSDGATSTSAAPRRKPSWXXXXXXXXXXXXXXAIAAKIFAGLRAQGNYNLPKHCDNNEV 60
           MT+ G++       R P+W              AIAAKI++GLRAQGN+ LPKHCDNNEV
Sbjct: 1   MTAGGSSG------RLPTWKERENNKRRERRRRAIAAKIYSGLRAQGNFKLPKHCDNNEV 54

Query: 61  LKALCSEAGWVVEDDGTTYRKGCKPPPIDIVGTSARITXXXXXXXXXXXXXXXXXXXXXX 120
           LKALC+EAGW+VE+DGTTYRKGCKPPP ++ GT   I+                      
Sbjct: 55  LKALCAEAGWIVEEDGTTYRKGCKPPPTELTGTPTNISACSSIQPSPQSSNFPSPVPSYH 114

Query: 121 XXXXXXXXXXXXRVDNNTPFNLLPFLQN--AIPSSLPPLRISNSAPVXXXXXXXXXXXXX 178
                       R + N    LLPFL+N  +IP++LPPLRISNSAPV             
Sbjct: 115 ASPSSSSFPSPTRFEGNPSTYLLPFLRNIASIPANLPPLRISNSAPVTPPLSSPTNRNSK 174

Query: 179 XXXNWEFIAKQSMASLNYPFCAASAPASPTHRQFHAPATIPECDESDTSTVESGQWISFQ 238
              +WE  +  S+ S  +P  A SAP+SPT RQ   PATIPECDESD STV+SG+W++FQ
Sbjct: 175 RKADWESFSNGSLKSFCHPLFALSAPSSPTRRQHLTPATIPECDESDASTVDSGRWVNFQ 234

Query: 239 KFAPSMAAMPTSPTYNLVKPVAGQILSGNVIQ-----------ENGRSMEFEFGSVQVKP 287
             AP +A  P SPT+NLVK V+ Q    + +            E GR  EFEF + +VKP
Sbjct: 235 AVAPQVA--PPSPTFNLVKSVSQQSAFQDRVDGHGGLGWGPAAERGRVSEFEFENARVKP 292

Query: 288 WEGERIHEIGLDDLELTLGNGKARS 312
           WEGERIHEIG++DLELTLG+ KA +
Sbjct: 293 WEGERIHEIGMEDLELTLGSAKAHA 317


>30026.m001485 BRASSINAZOLE-RESISTANT 2 protein, putative
          Length = 331

 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/82 (64%), Positives = 59/82 (71%), Gaps = 1/82 (1%)

Query: 15 RKPSWXXXXXXXXXXXXXXAIAAKIFAGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVED 74
          R P+W              AIAAKI+AGLR  GNY LPKHCDNNEVLKALC+EAGW VE+
Sbjct: 6  RMPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEE 65

Query: 75 DGTTYRKGCKP-PPIDIVGTSA 95
          DGTTYRKGCKP   +DI+G SA
Sbjct: 66 DGTTYRKGCKPVERMDIMGGSA 87



 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 4/56 (7%)

Query: 260 AGQILSGNVIQENGRSMEFEFGSVQ---VKPWEGERIHEIGL-DDLELTLGNGKAR 311
           AG   + +V   +  + EF FGS     VKPWEGERIHE  + DDLELTLGN   R
Sbjct: 276 AGVDHTADVPMADSMAAEFAFGSNTTGLVKPWEGERIHEECVSDDLELTLGNSSTR 331


>29827.m002636 Beta-amylase, putative
          Length = 668

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 38/62 (61%)

Query: 34  AIAAKIFAGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEDDGTTYRKGCKPPPIDIVGT 93
           AI +++ AGLR  GN+ LP   D N+VL AL  EAGW VE DGTTYR+   P  +   G 
Sbjct: 92  AITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVESDGTTYRQSPAPSQLGSFGV 151

Query: 94  SA 95
            +
Sbjct: 152 RS 153


>30075.m001185 BRASSINAZOLE-RESISTANT 1 protein, putative
          Length = 225

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 32/47 (68%)

Query: 34 AIAAKIFAGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEDDGTTYR 80
          AI  KIF GLR  G Y+L    D NEVL+ L  EAGWVV+ DGTTYR
Sbjct: 25 AITTKIFHGLRRHGGYHLSPRADINEVLRELAKEAGWVVDPDGTTYR 71


>30174.m009027 Beta-amylase, putative
          Length = 704

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 32/46 (69%)

Query: 34  AIAAKIFAGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEDDGTTY 79
           AI A+I AGLR  GNYNL    D N+V+ AL  EAGWVV  DGTT+
Sbjct: 102 AITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTF 147


>29820.m001005 conserved hypothetical protein
          Length = 98

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/33 (66%), Positives = 26/33 (78%)

Query: 38 KIFAGLRAQGNYNLPKHCDNNEVLKALCSEAGW 70
          KIFAGLR  GN+ LPKH D+N+VLKALC   G+
Sbjct: 59 KIFAGLRQHGNFKLPKHADSNDVLKALCXAGGY 91