Jatropha Genome Database

JcCA0311291.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311291.30 - phase: 0 /partial
         (447 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29631.m001021 nucleoredoxin, putative                                 703   0.0  
29631.m001022 nucleoredoxin, putative                                 560   e-160
30170.m014281 nucleoredoxin, putative                                 271   4e-73

>29631.m001021 nucleoredoxin, putative
          Length = 553

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/422 (78%), Positives = 376/422 (89%)

Query: 1   IPNLVVLDANGKVSCDRGVDIIRNYGAEGYPFTPEKLDYLRQEEENAKNNQTISSILVSS 60
           IPNLV LDA+GKVSCD+GV  IR YGAEGYPFTPE+++Y RQEEENAK NQT+SSILVSS
Sbjct: 121 IPNLVFLDADGKVSCDQGVRFIREYGAEGYPFTPERVEYFRQEEENAKKNQTLSSILVSS 180

Query: 61  SRDYLISNEGTKIPVSDLQGKMVGLYFSAYPHRLCLEFTPKLVEIYKKLKEKGENFEIVL 120
           SRD+LIS +GTKIPVS+L+GKMVGLYFS + HRLCL+FTP+L E+YKKLKEKGE FE+VL
Sbjct: 181 SRDFLISKDGTKIPVSELEGKMVGLYFSVHSHRLCLDFTPRLEEVYKKLKEKGEKFEVVL 240

Query: 121 ISIDYDEKDFKQSFEKMPWLALPFQDKGREKLARYFELSALPSLVIIGEDGKTLNQNVAE 180
           IS+DYDE +FKQ  E MPWLALPF+DK RE+LARYFELSALP+LVIIGEDGKTLN+NVAE
Sbjct: 241 ISMDYDENNFKQGLETMPWLALPFEDKSRERLARYFELSALPTLVIIGEDGKTLNKNVAE 300

Query: 181 LIEDHGIEAYPFTPDKLDELAEIEKARLEAQTLESVLVHGDKDFVIEKTGSKVPVSELAG 240
           LIE HGI+AYPFTP+KL ELAEIEKARLEAQTLESVLVHGDKDFVIE++GSKVPVSEL G
Sbjct: 301 LIEGHGIQAYPFTPEKLVELAEIEKARLEAQTLESVLVHGDKDFVIEESGSKVPVSELVG 360

Query: 241 RNVLLYFSAKWCPPCRAFLPKLIEAYKEIKEKDSRFEIIFVSSDRDQSSFEEFYSGMPWL 300
           +N+LLYFSAKWCPPCRAFLPKLIEAY EIK KD+ FEIIF+SSDRDQSSF+EFY+ MPWL
Sbjct: 361 KNILLYFSAKWCPPCRAFLPKLIEAYHEIKAKDNAFEIIFISSDRDQSSFDEFYTEMPWL 420

Query: 301 ALPFGDERKTILQKKFKIKGIPAAIAISSSGKTVTKEAKEHLTAYGADAYPFTEQHLKQL 360
           ALPFGD+RKTILQ+KFKIKGIPAAIAIS +GKT+TKEA+EH+TAYGADAYPF E HLKQL
Sbjct: 421 ALPFGDDRKTILQRKFKIKGIPAAIAISPTGKTLTKEAREHITAYGADAYPFNEDHLKQL 480

Query: 361 KEKLEEIAKGWPXXXXXXXXXXXXXVRIKRKGFVCNGCREMGHGWSFYCKECDFDLHPNC 420
            +K EEIAKGWP             VR+KR G+ C+GC+E G GWSFYCK+CDFDLHP C
Sbjct: 481 NDKQEEIAKGWPEKVRHELHPEHELVRMKRNGYGCDGCKEAGSGWSFYCKKCDFDLHPKC 540

Query: 421 AL 422
           AL
Sbjct: 541 AL 542



 Score =  242 bits (618), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 125/300 (41%), Positives = 185/300 (61%), Gaps = 2/300 (0%)

Query: 64  YLISNEGTKIPVSDLQGKMVGLYFSAYPHRLCLEFTPKLVEIYKKLKEKGENFEIVLISI 123
           +LI + G ++ +S+L GK+VGLYFS      C  FTP LV++Y++L  KG +FE+V IS 
Sbjct: 24  FLIRSNGDQVKISNLVGKIVGLYFSGSWCGPCRHFTPNLVQVYEELSLKG-DFEVVFISS 82

Query: 124 DYDEKDFKQSFEKMPWLALPFQDKGREK-LARYFELSALPSLVIIGEDGKTLNQNVAELI 182
           D D + F   F KMPWLA+PF D+   K L   F++  +P+LV +  DGK         I
Sbjct: 83  DRDAESFDAYFSKMPWLAIPFSDQETCKHLKDLFKVRGIPNLVFLDADGKVSCDQGVRFI 142

Query: 183 EDHGIEAYPFTPDKLDELAEIEKARLEAQTLESVLVHGDKDFVIEKTGSKVPVSELAGRN 242
            ++G E YPFTP++++   + E+   + QTL S+LV   +DF+I K G+K+PVSEL G+ 
Sbjct: 143 REYGAEGYPFTPERVEYFRQEEENAKKNQTLSSILVSSSRDFLISKDGTKIPVSELEGKM 202

Query: 243 VLLYFSAKWCPPCRAFLPKLIEAYKEIKEKDSRFEIIFVSSDRDQSSFEEFYSGMPWLAL 302
           V LYFS      C  F P+L E YK++KEK  +FE++ +S D D+++F++    MPWLAL
Sbjct: 203 VGLYFSVHSHRLCLDFTPRLEEVYKKLKEKGEKFEVVLISMDYDENNFKQGLETMPWLAL 262

Query: 303 PFGDERKTILQKKFKIKGIPAAIAISSSGKTVTKEAKEHLTAYGADAYPFTEQHLKQLKE 362
           PF D+ +  L + F++  +P  + I   GKT+ K   E +  +G  AYPFT + L +L E
Sbjct: 263 PFEDKSRERLARYFELSALPTLVIIGEDGKTLNKNVAELIEGHGIQAYPFTPEKLVELAE 322



 Score =  128 bits (321), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 2/148 (1%)

Query: 224 FVIEKTGSKVPVSELAGRNVLLYFSAKWCPPCRAFLPKLIEAYKEIKEKDSRFEIIFVSS 283
           F+I   G +V +S L G+ V LYFS  WC PCR F P L++ Y+E+  K   FE++F+SS
Sbjct: 24  FLIRSNGDQVKISNLVGKIVGLYFSGSWCGPCRHFTPNLVQVYEELSLKGD-FEVVFISS 82

Query: 284 DRDQSSFEEFYSGMPWLALPFGDERKT-ILQKKFKIKGIPAAIAISSSGKTVTKEAKEHL 342
           DRD  SF+ ++S MPWLA+PF D+     L+  FK++GIP  + + + GK    +    +
Sbjct: 83  DRDAESFDAYFSKMPWLAIPFSDQETCKHLKDLFKVRGIPNLVFLDADGKVSCDQGVRFI 142

Query: 343 TAYGADAYPFTEQHLKQLKEKLEEIAKG 370
             YGA+ YPFT + ++  +++ E   K 
Sbjct: 143 REYGAEGYPFTPERVEYFRQEEENAKKN 170


>29631.m001022 nucleoredoxin, putative
          Length = 575

 Score =  560 bits (1443), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 263/456 (57%), Positives = 339/456 (74%), Gaps = 9/456 (1%)

Query: 1   IPNLVVLDANGKVSCDRGVDIIRNYGAEGYPFTPEKLDYLRQEEENAKNNQTISSILVSS 60
           IP+ V+LD NGKVS + GV+II+ YG + YPFT E++  L+ +EE A+ NQ++ SILV  
Sbjct: 120 IPHFVILDENGKVSSESGVEIIQEYGVQCYPFTAERIKVLKGQEEEARRNQSLRSILVFG 179

Query: 61  SRDYLISNEGTKIPVSDLQGKMVGLYFSAYPHRLCLEFTPKLVEIYKKLKEKGENFEIVL 120
           SRDY+I+++G K+ VS+L+GK VGLYFS   +  C++FT  L E+Y+KLK KGENFEIV 
Sbjct: 180 SRDYVIASDGKKVSVSELEGKTVGLYFSLSSYTSCVDFTSTLAEVYEKLKAKGENFEIVF 239

Query: 121 ISIDYDEKDFKQSFEKMPWLALPFQDKGREKLARYFELSALPSLVIIGEDGKTLNQNVAE 180
           IS+D +E+ F+QS   MPWLA PF DKG EKL RYFELS +P+LV+IG DGKTL+ NVAE
Sbjct: 240 ISLDDEEETFQQSLANMPWLAFPFNDKGCEKLVRYFELSTVPTLVVIGPDGKTLHSNVAE 299

Query: 181 LIEDHGIEAYPFTPDKLDELAEIEKARLEAQTLESVLVHGDKDFVIEKTGSKVPVSELAG 240
            IE+HG++AYPFTP+K  ELAE+EKAR  AQTLESVLV GD++FVI + G+K+PV++L G
Sbjct: 300 AIEEHGVQAYPFTPEKFAELAEMEKAREAAQTLESVLVSGDQNFVIGRDGAKIPVTDLVG 359

Query: 241 RNVLLYFSAKWCPPCRAFLPKLIEAYKEIKEKDSRFEIIFVSSDRDQSSFEEFYSGMPWL 300
           +N+LLYFSA WCPPCRAFLPKL+EAY EIK KD  FE+IF+SSDRDQ+SF+EF+SGMPWL
Sbjct: 360 KNILLYFSAHWCPPCRAFLPKLVEAYHEIKTKDDAFEVIFISSDRDQASFDEFFSGMPWL 419

Query: 301 ALPFGDERKTILQKKFKIKGIPAAIAISSSGKTVTKEAKEHLTAYGADAYPFTEQHLKQL 360
           ALPFGD RK  L +KFK++GIP  IA+  +G+T+TKEA+  +T +GADAY FTE+HLK++
Sbjct: 420 ALPFGDVRKASLSRKFKVQGIPMLIALGPTGRTITKEARSLVTLHGADAYLFTEEHLKEI 479

Query: 361 KEKLEEIAKGWPXXXXXXXXXXXXXVRIKRKGFVCNGCREMGHGWSFYCKECDFDLHPNC 420
           + K E++AKGWP             V  +R  F+C+GC E G+ WSF+C+ECDFDLHP C
Sbjct: 480 EAKYEDMAKGWPEKVNHALHEEHELVLSRRMNFICDGCNEGGNIWSFHCEECDFDLHPKC 539

Query: 421 ALXXXXXXXXXXXXXXR---------ICQGDTCRKA 447
           AL                        IC G+ C KA
Sbjct: 540 ALKEGKETRDGGKEDENGEAVSKEGWICDGEVCYKA 575



 Score =  250 bits (639), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 127/309 (41%), Positives = 189/309 (61%), Gaps = 2/309 (0%)

Query: 55  SILVSSSRDYLISNEGTKIPVSDLQGKMVGLYFSAYPHRLCLEFTPKLVEIYKKLKEKGE 114
           S+L SS RDYLI N G ++ +  L+GK +GLYFSA     C  FTP LVE+Y +L  KG 
Sbjct: 14  SLLSSSDRDYLIRNNGDQVEIDSLKGKKLGLYFSASWCGPCQRFTPTLVEVYNELAPKG- 72

Query: 115 NFEIVLISIDYDEKDFKQSFEKMPWLALPFQDKG-REKLARYFELSALPSLVIIGEDGKT 173
           +FEIV I+ D D++ F++ F KMPWLA+PF D   R++L   F++  +P  VI+ E+GK 
Sbjct: 73  DFEIVFITADEDDESFEEYFSKMPWLAIPFSDSDKRDRLDEIFKVQGIPHFVILDENGKV 132

Query: 174 LNQNVAELIEDHGIEAYPFTPDKLDELAEIEKARLEAQTLESVLVHGDKDFVIEKTGSKV 233
            +++  E+I+++G++ YPFT +++  L   E+     Q+L S+LV G +D+VI   G KV
Sbjct: 133 SSESGVEIIQEYGVQCYPFTAERIKVLKGQEEEARRNQSLRSILVFGSRDYVIASDGKKV 192

Query: 234 PVSELAGRNVLLYFSAKWCPPCRAFLPKLIEAYKEIKEKDSRFEIIFVSSDRDQSSFEEF 293
            VSEL G+ V LYFS      C  F   L E Y+++K K   FEI+F+S D ++ +F++ 
Sbjct: 193 SVSELEGKTVGLYFSLSSYTSCVDFTSTLAEVYEKLKAKGENFEIVFISLDDEEETFQQS 252

Query: 294 YSGMPWLALPFGDERKTILQKKFKIKGIPAAIAISSSGKTVTKEAKEHLTAYGADAYPFT 353
            + MPWLA PF D+    L + F++  +P  + I   GKT+     E +  +G  AYPFT
Sbjct: 253 LANMPWLAFPFNDKGCEKLVRYFELSTVPTLVVIGPDGKTLHSNVAEAIEEHGVQAYPFT 312

Query: 354 EQHLKQLKE 362
            +   +L E
Sbjct: 313 PEKFAELAE 321



 Score =  137 bits (346), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 97/153 (63%), Gaps = 2/153 (1%)

Query: 215 SVLVHGDKDFVIEKTGSKVPVSELAGRNVLLYFSAKWCPPCRAFLPKLIEAYKEIKEKDS 274
           S+L   D+D++I   G +V +  L G+ + LYFSA WC PC+ F P L+E Y E+  K  
Sbjct: 14  SLLSSSDRDYLIRNNGDQVEIDSLKGKKLGLYFSASWCGPCQRFTPTLVEVYNELAPK-G 72

Query: 275 RFEIIFVSSDRDQSSFEEFYSGMPWLALPFGD-ERKTILQKKFKIKGIPAAIAISSSGKT 333
            FEI+F+++D D  SFEE++S MPWLA+PF D +++  L + FK++GIP  + +  +GK 
Sbjct: 73  DFEIVFITADEDDESFEEYFSKMPWLAIPFSDSDKRDRLDEIFKVQGIPHFVILDENGKV 132

Query: 334 VTKEAKEHLTAYGADAYPFTEQHLKQLKEKLEE 366
            ++   E +  YG   YPFT + +K LK + EE
Sbjct: 133 SSESGVEIIQEYGVQCYPFTAERIKVLKGQEEE 165


>30170.m014281 nucleoredoxin, putative
          Length = 389

 Score =  271 bits (693), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 219/364 (60%), Gaps = 15/364 (4%)

Query: 72  KIPVSDLQGKMVGLYFSAYPHRLCLEFTPKLVEIYKKLKEKGENFEIVLISIDYDEKDFK 131
           K+ VS+L+GK++GLYFSA  +  C  F   L  +Y++LKE G NFE+V +S D +   F 
Sbjct: 16  KVKVSELEGKVIGLYFSANWYPPCRNFNQVLAGVYEQLKENGSNFEVVFVSSDENLDAFN 75

Query: 132 QSFEKMPWLALPFQD-KGREKLARYFELSALPSLVII----GEDGKTLNQNVAELIEDHG 186
                MPWL++PF D + ++ L R F +  +P LVI+     ++  TL+  V +L+   G
Sbjct: 76  NYRALMPWLSIPFSDLETKKALDRKFNIEGVPCLVILQPKDDKEEATLHDGV-DLLYRFG 134

Query: 187 IEAYPFTPDKLDELAEIEKARLEAQTLESVLVHGDKDFVIEKTGSK-VPVSELAGRNVLL 245
           ++A+PFT ++L+EL   EK + E+QTL ++L + D+D++      K VPV+ L G+ + L
Sbjct: 135 VQAFPFTKERLEELKMQEKEKHESQTLTNLLTNHDRDYLFAHPAPKQVPVASLIGKTIGL 194

Query: 246 YFSAKWCPPCRAFLPKLIEAYKEIK----EKDSR-FEIIFVSSDRDQSSFEEFYSGMPWL 300
           +FSA+WC P   F PKLI  Y +IK    E++S  FEI+FVS+DRDQ  F+ +++ MPWL
Sbjct: 195 FFSAQWCRPGMKFTPKLISIYHKIKQMLRERESEDFEIVFVSTDRDQEGFDSYFNTMPWL 254

Query: 301 ALPFGDERKTILQKKFKIKGIPAAIAISSSGKTVTKEAKEHLTAYGADAYPFTEQHLKQL 360
           ALPFGD     L K F ++GIP  I I  +GKT+TK  +  +  Y  +AYPFTE  ++ L
Sbjct: 255 ALPFGDPTIKTLTKYFDVQGIPCLIIIGPNGKTITKNGRNLINLYQENAYPFTEAKVELL 314

Query: 361 KEKLEEIAKGWPXXXXXXXXXXXXXVRIKRKG---FVCNGCREMGHGWSFYCKECDFDLH 417
           ++++EE  K  P             +  +  G   ++C  C E G GW++ C EC +++H
Sbjct: 315 EKQMEEEFKSLPRSEYHVGHKHELNLVTEGTGGGPYICCDCDEQGSGWAYQCLECGYEVH 374

Query: 418 PNCA 421
           P C 
Sbjct: 375 PKCV 378



 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 132/209 (63%), Gaps = 9/209 (4%)

Query: 1   IPNLVVL---DANGKVSCDRGVDIIRNYGAEGYPFTPEKLDYLRQEEENAKNNQTISSIL 57
           +P LV+L   D   + +   GVD++  +G + +PFT E+L+ L+ +E+    +QT++++L
Sbjct: 106 VPCLVILQPKDDKEEATLHDGVDLLYRFGVQAFPFTKERLEELKMQEKEKHESQTLTNLL 165

Query: 58  VSSSRDYLISNEGTK-IPVSDLQGKMVGLYFSAYPHRLCLEFTPKLVEIYKKLKE----- 111
            +  RDYL ++   K +PV+ L GK +GL+FSA   R  ++FTPKL+ IY K+K+     
Sbjct: 166 TNHDRDYLFAHPAPKQVPVASLIGKTIGLFFSAQWCRPGMKFTPKLISIYHKIKQMLRER 225

Query: 112 KGENFEIVLISIDYDEKDFKQSFEKMPWLALPFQDKGREKLARYFELSALPSLVIIGEDG 171
           + E+FEIV +S D D++ F   F  MPWLALPF D   + L +YF++  +P L+IIG +G
Sbjct: 226 ESEDFEIVFVSTDRDQEGFDSYFNTMPWLALPFGDPTIKTLTKYFDVQGIPCLIIIGPNG 285

Query: 172 KTLNQNVAELIEDHGIEAYPFTPDKLDEL 200
           KT+ +N   LI  +   AYPFT  K++ L
Sbjct: 286 KTITKNGRNLINLYQENAYPFTEAKVELL 314