Jatropha Genome Database

JcCA0311291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311291.10 + phase: 0 /partial
         (175 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29631.m001019 Pantothenate kinase, putative                           294   1e-80
30147.m013941 Pantothenate kinase, putative                           246   5e-66

>29631.m001019 Pantothenate kinase, putative
          Length = 414

 Score =  294 bits (753), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 143/175 (81%), Positives = 155/175 (88%)

Query: 1   NNRVIDMLVGDIYGGTDYSKIGLSSTTIASSFGKAISDNKEIDDYKPEDVARSLLRMISN 60
           NNRVIDMLVGDIYGGTDYSK GLSSTTIASSFGKA+SDNKE++DYKPEDVARSLLRMISN
Sbjct: 240 NNRVIDMLVGDIYGGTDYSKFGLSSTTIASSFGKAVSDNKELEDYKPEDVARSLLRMISN 299

Query: 61  NIGQISYLNALRFGLKRIFFGGFFIQGHPYTMDTISVAVHFWSKGEAKAMFLRHEGFLGV 120
           NIGQISYLNALRFGLKRIFFGGFFIQGH YTMDTISVAVHFWSKGEAKAMFLRHEGFLG 
Sbjct: 300 NIGQISYLNALRFGLKRIFFGGFFIQGHSYTMDTISVAVHFWSKGEAKAMFLRHEGFLGA 359

Query: 121 LGAFMSYAKHSLDDSVVNQSMQSLVNGSYASDTNYNPQNGDWSDNESIPCSLYTA 175
           LGAF SY K SLDD  VN+S++   N SY +D+N+NP +GD  DN SI  S+Y +
Sbjct: 360 LGAFRSYEKRSLDDFGVNKSLKLPENASYTADSNFNPPSGDLKDNGSIQSSVYAS 414


>30147.m013941 Pantothenate kinase, putative
          Length = 907

 Score =  246 bits (627), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 121/169 (71%), Positives = 139/169 (82%), Gaps = 3/169 (1%)

Query: 1   NNRVIDMLVGDIYGGTDYSKIGLSSTTIASSFGKAISDNKEIDDYKPEDVARSLLRMISN 60
           +NR IDMLVGDIYGG DY+KIGLS++TIASSFGK IS+ KE++DY+PED++ SLLRMIS 
Sbjct: 305 DNRTIDMLVGDIYGGMDYNKIGLSASTIASSFGKTISEKKELEDYRPEDISLSLLRMISY 364

Query: 61  NIGQISYLNALRFGLKRIFFGGFFIQGHPYTMDTISVAVHFWSKGEAKAMFLRHEGFLGV 120
           NIGQISYLNALRFGLKRIFFGGFFI+GH YTMDTIS AVHFWSKGEA+AMFLRHEGFLG 
Sbjct: 365 NIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGEAQAMFLRHEGFLGA 424

Query: 121 LGAFMSYAKHSLDDSVVNQSMQSLVNGS-YASDTNYNPQNGDWSDNESI 168
           LGAFMSY KH LDD +V+Q ++    G+ Y     + P  GD   NE I
Sbjct: 425 LGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDL--NEKI 471