Jatropha Genome Database

JcCA0311161.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311161.20 + phase: 1 /pseudo/partial
         (114 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008869 phospholipase d zeta, putative                          102   3e-23
29726.m004097 phospholipase d zeta, putative                           99   3e-22

>30128.m008869 phospholipase d zeta, putative
          Length = 1077

 Score =  102 bits (255), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 65/94 (69%), Gaps = 18/94 (19%)

Query: 3  TVRSDSAMLHQSYSLRQFPQLCWIFDELPKATIVSVSKPDTGDISLILLSYTIELQFKQF 62
           +RSD  +L QSYS RQFP+L WIF ELPKATI+SVSKP+TGD+S +L SYTIELQ+  F
Sbjct: 12 AMRSDGTLLEQSYSFRQFPELGWIFYELPKATILSVSKPETGDLSPMLFSYTIELQY-XF 70

Query: 63 HWRLVKKASQVLNLHFALKKRAMIEEFHEKQEQV 96
                            +KRA+IEEFHEKQEQV
Sbjct: 71 Q-----------------RKRAIIEEFHEKQEQV 87


>29726.m004097 phospholipase d zeta, putative
          Length = 1117

 Score = 99.4 bits (246), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/76 (67%), Positives = 58/76 (76%), Gaps = 5/76 (6%)

Query: 21  PQLCWIFDELPKATIVSVSKPDTGDISLILLSYTIELQFKQFHWRLVKKASQVLNLHFAL 80
           P+   IFDELP ATIVSVS+PD GDIS +LL+YTIE     F W+L KKA+QV  LHFAL
Sbjct: 54  PESTRIFDELPTATIVSVSRPDAGDISPVLLTYTIE-----FKWQLSKKAAQVFYLHFAL 108

Query: 81  KKRAMIEEFHEKQEQV 96
           K+RA  EE HEKQEQV
Sbjct: 109 KRRAFFEEIHEKQEQV 124