Jatropha Genome Database

JcCA0310961.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310961.20 + phase: 0 /partial
         (70 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29727.m000487 (S)-2-hydroxy-acid oxidase, putative                    123   1e-29
29727.m000481 (S)-2-hydroxy-acid oxidase, putative                    107   1e-24
29727.m000486 (S)-2-hydroxy-acid oxidase, putative                    105   3e-24
29693.m001985 (S)-2-hydroxy-acid oxidase, putative                     89   4e-19
29727.m000482 (S)-2-hydroxy-acid oxidase, putative                     71   1e-13

>29727.m000487 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  123 bits (309), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/70 (87%), Positives = 63/70 (90%), Gaps = 1/70 (1%)

Query: 1  MESEPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQ 60
          M SEPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAF R  +   RILVDVSQ
Sbjct: 1  MGSEPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFHRITIRP-RILVDVSQ 59

Query: 61 IDMSTTVLGY 70
          IDMSTT+LGY
Sbjct: 60 IDMSTTILGY 69


>29727.m000481 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  107 bits (266), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/70 (71%), Positives = 59/70 (84%), Gaps = 1/70 (1%)

Query: 1  MESEPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQ 60
          M +EPVNVNEFQ LAKQ LPKM+YD+Y+GGAEDQHTLKENV+AF +   F  RILVD+S+
Sbjct: 1  MAAEPVNVNEFQILAKQVLPKMHYDFYSGGAEDQHTLKENVQAF-KKITFRPRILVDISR 59

Query: 61 IDMSTTVLGY 70
          I M TT+LGY
Sbjct: 60 IAMPTTILGY 69


>29727.m000486 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  105 bits (263), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/70 (75%), Positives = 56/70 (80%), Gaps = 1/70 (1%)

Query: 1  MESEPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQ 60
          M +EPVNVNE Q LAKQ LPKMYYDYY GGAEDQHTLKEN EAF R   F  RILV VS 
Sbjct: 1  MAAEPVNVNELQILAKQVLPKMYYDYYTGGAEDQHTLKENEEAFKR-ITFRPRILVGVSS 59

Query: 61 IDMSTTVLGY 70
          I+MSTT+LGY
Sbjct: 60 IEMSTTILGY 69


>29693.m001985 (S)-2-hydroxy-acid oxidase, putative
          Length = 369

 Score = 89.0 bits (219), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)

Query: 4  EPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFCRNHVFDLRILVDVSQIDM 63
          E  NV E++E+A+Q LPKM YDYYA GAEDQ TLKEN  AF R  +F  RIL+DVS+IDM
Sbjct: 2  EITNVMEYEEIARQKLPKMVYDYYASGAEDQWTLKENRNAFSRI-LFRPRILIDVSKIDM 60

Query: 64 STTVLGY 70
          +T+VLG+
Sbjct: 61 TTSVLGF 67


>29727.m000482 (S)-2-hydroxy-acid oxidase, putative
          Length = 300

 Score = 71.2 bits (173), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/36 (83%), Positives = 34/36 (94%)

Query: 1  MESEPVNVNEFQELAKQALPKMYYDYYAGGAEDQHT 36
          M +EPVNVNEFQ LAKQALPKMYYD+Y+GGAEDQ+T
Sbjct: 15 MAAEPVNVNEFQVLAKQALPKMYYDFYSGGAEDQNT 50