Jatropha Genome Database

JcCA0310961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310961.10 + phase: 0 /pseudo
         (341 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29727.m000481 (S)-2-hydroxy-acid oxidase, putative                    501   e-142
29727.m000487 (S)-2-hydroxy-acid oxidase, putative                    466   e-132
29727.m000486 (S)-2-hydroxy-acid oxidase, putative                    457   e-129
29693.m001985 (S)-2-hydroxy-acid oxidase, putative                    351   4e-97
29727.m000482 (S)-2-hydroxy-acid oxidase, putative                    332   2e-91
29727.m000485 (S)-2-hydroxy-acid oxidase, putative                    196   2e-50

>29727.m000481 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  501 bits (1290), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/366 (71%), Positives = 277/366 (75%), Gaps = 27/366 (7%)

Query: 1   MAAEPVNVNEFQILAKQVLPKMYXTSTLGEQRTSILYKIMWKHFKK-------------- 46
           MAAEPVNVNEFQILAKQVLPKM+     G        K   + FKK              
Sbjct: 1   MAAEPVNVNEFQILAKQVLPKMHYDFYSGGAEDQHTLKENVQAFKKITFRPRILVDISRI 60

Query: 47  -----------SSPIMVAPTAMHKLAHPEGEIXXXXXXXXCNTIMVLSFSATCSLEEVAA 95
                      S+PIM+APTAMHKLAHPEGEI         NT+MVLSFSATCSLEEVAA
Sbjct: 61  AMPTTILGYTISAPIMIAPTAMHKLAHPEGEIATARAAAASNTVMVLSFSATCSLEEVAA 120

Query: 96  CCNAVRFFQLYVYKRRDIAANLVQRAERKGYKAIVLTVDTPRLGRREADIKNKMISPQLK 155
            CNAVRFFQLYVYKRRDIAA LVQRAER GYKAIVLT D PRLGRREADIKNKM  PQLK
Sbjct: 121 SCNAVRFFQLYVYKRRDIAAKLVQRAERNGYKAIVLTADCPRLGRREADIKNKMFVPQLK 180

Query: 156 NLEGLISTQVVSDKGSSLEAYANQILDASLSWKDVRWLKSITNLPILIKGVLTREDATKA 215
           NLEGL+ST+VVS+KGS LEAYAN+  DASL WKDV WLKSITNLPILIKGVLT EDA KA
Sbjct: 181 NLEGLLSTEVVSEKGSGLEAYANETFDASLCWKDVGWLKSITNLPILIKGVLTPEDAVKA 240

Query: 216 MEVGVDGIIVSNHGARQLDYTPATISALEEVVDAVRGKFPVLLDGGVRRGTDVFKXXXXX 275
           MEVGV GIIVSNHGARQLDY+PATISALEEVV AV GK PVLLDGGVRRGTDVFK     
Sbjct: 241 MEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVGGKIPVLLDGGVRRGTDVFKALALG 300

Query: 276 XXXXXXXRPVIYGLAVKGEHGARRVIEMLKDELELTMALSGCPSLTDITRTHVRTKHDIG 335
                  RPVIYGLAVKGE G R+V++MLKDELEL MALSGCPSL  ITR+HVRT+ D  
Sbjct: 301 AQAVLVGRPVIYGLAVKGEDGVRQVMKMLKDELELAMALSGCPSLKHITRSHVRTERD-- 358

Query: 336 KLQSML 341
           +LQSML
Sbjct: 359 RLQSML 364


>29727.m000487 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  466 bits (1198), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/366 (63%), Positives = 278/366 (75%), Gaps = 27/366 (7%)

Query: 1   MAAEPVNVNEFQILAKQVLPKMYX---------TSTLGE-----QRTSILYKIMWK---- 42
           M +EPVNVNEFQ LAKQ LPKMY            TL E      R +I  +I+      
Sbjct: 1   MGSEPVNVNEFQELAKQALPKMYYDYYAGGAEDQHTLKENVEAFHRITIRPRILVDVSQI 60

Query: 43  -------HFKKSSPIMVAPTAMHKLAHPEGEIXXXXXXXXCNTIMVLSFSATCSLEEVAA 95
                   +K S+PIM+APTAMHKLA+PEGE         CNTIMVLS+ ++C++EEVA+
Sbjct: 61  DMSTTILGYKISAPIMIAPTAMHKLANPEGEAATARAAAVCNTIMVLSYMSSCTVEEVAS 120

Query: 96  CCNAVRFFQLYVYKRRDIAANLVQRAERKGYKAIVLTVDTPRLGRREADIKNKMISPQLK 155
            CNA+RF+QLYVYKRRDI+A LVQRAER GYKAIVLTVD PRLGRREADI+NKM++PQLK
Sbjct: 121 SCNAIRFYQLYVYKRRDISAQLVQRAERNGYKAIVLTVDAPRLGRREADIRNKMVAPQLK 180

Query: 156 NLEGLISTQVVSDKGSSLEAYANQILDASLSWKDVRWLKSITNLPILIKGVLTREDATKA 215
           N EGLIST+V S++GS+LE +A +  DAS+SWKD+ WL+SIT+LPILIKGVLT EDA KA
Sbjct: 181 NFEGLISTEVASNEGSNLEVFAKETFDASMSWKDISWLRSITSLPILIKGVLTHEDAIKA 240

Query: 216 MEVGVDGIIVSNHGARQLDYTPATISALEEVVDAVRGKFPVLLDGGVRRGTDVFKXXXXX 275
           +EVGV GI+VSNHGARQLDY+PATI+ LEEVV AV GK PVL DGGV+RGTDVFK     
Sbjct: 241 VEVGVAGIVVSNHGARQLDYSPATITVLEEVVHAVGGKIPVLFDGGVQRGTDVFKALALG 300

Query: 276 XXXXXXXRPVIYGLAVKGEHGARRVIEMLKDELELTMALSGCPSLTDITRTHVRTKHDIG 335
                  RPV++GLA KG++G RRVIEMLK+ELELTMALSGCPS+  ITR+HVRT+ +  
Sbjct: 301 AQAVLVGRPVVFGLAAKGDYGVRRVIEMLKNELELTMALSGCPSVKCITRSHVRTERE-- 358

Query: 336 KLQSML 341
           +LQSML
Sbjct: 359 RLQSML 364


>29727.m000486 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  457 bits (1177), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/366 (64%), Positives = 266/366 (72%), Gaps = 27/366 (7%)

Query: 1   MAAEPVNVNEFQILAKQVLPKMYXTSTLGEQRTSILYKIMWKHFKK-------------- 46
           MAAEPVNVNE QILAKQVLPKMY     G        K   + FK+              
Sbjct: 1   MAAEPVNVNELQILAKQVLPKMYYDYYTGGAEDQHTLKENEEAFKRITFRPRILVGVSSI 60

Query: 47  -----------SSPIMVAPTAMHKLAHPEGEIXXXXXXXXCNTIMVLSFSATCSLEEVAA 95
                      S+PIM+APTAMHKLAHPEGE+         +TIMV+S SA+CSL+EVAA
Sbjct: 61  EMSTTILGYTVSAPIMIAPTAMHKLAHPEGEVATARAAAASDTIMVVSSSASCSLKEVAA 120

Query: 96  CCNAVRFFQLYVYKRRDIAANLVQRAERKGYKAIVLTVDTPRLGRREADIKNKMISPQLK 155
            CNAVRFFQLYVYKRRD+A  LVQRAE  GYKAI+LT D+PR GRREADIKNKMI PQ K
Sbjct: 121 SCNAVRFFQLYVYKRRDMATILVQRAECNGYKAIILTADSPRFGRREADIKNKMIVPQRK 180

Query: 156 NLEGLISTQVVSDKGSSLEAYANQILDASLSWKDVRWLKSITNLPILIKGVLTREDATKA 215
           N+E  +  +VV + GS  EAYANQ +D+SL WKD+ WLKSITNLPILIKGVLTREDA KA
Sbjct: 181 NVEVFLPPKVVPENGSGYEAYANQHIDSSLCWKDIEWLKSITNLPILIKGVLTREDAVKA 240

Query: 216 MEVGVDGIIVSNHGARQLDYTPATISALEEVVDAVRGKFPVLLDGGVRRGTDVFKXXXXX 275
           ME+GV GIIVSNHGARQLDYTPATIS LEEVV AV  K PVLLDGG+RRGTDVFK     
Sbjct: 241 MEIGVAGIIVSNHGARQLDYTPATISVLEEVVQAVGEKVPVLLDGGIRRGTDVFKALALG 300

Query: 276 XXXXXXXRPVIYGLAVKGEHGARRVIEMLKDELELTMALSGCPSLTDITRTHVRTKHDIG 335
                  RPVIYGLAVKGE G R+V++MLKDELE+TMALSGC +L DITR+HVRT+ +  
Sbjct: 301 AQAVLVGRPVIYGLAVKGEDGVRQVMKMLKDELEITMALSGCATLKDITRSHVRTERE-- 358

Query: 336 KLQSML 341
           +L SML
Sbjct: 359 RLHSML 364


>29693.m001985 (S)-2-hydroxy-acid oxidase, putative
          Length = 369

 Score =  351 bits (900), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 189/360 (52%), Positives = 234/360 (65%), Gaps = 30/360 (8%)

Query: 4   EPVNVNEFQILAKQVLPKM---YXTS------TLGEQRTSILYKIMWK------------ 42
           E  NV E++ +A+Q LPKM   Y  S      TL E R +   +I+++            
Sbjct: 2   EITNVMEYEEIARQKLPKMVYDYYASGAEDQWTLKENRNA-FSRILFRPRILIDVSKIDM 60

Query: 43  -----HFKKSSPIMVAPTAMHKLAHPEGEIXXXXXXXXCNTIMVLSFSATCSLEEVAACC 97
                 FK S PIM+APTAM K+AHPEGE           TIM LS  AT S+EEVA+  
Sbjct: 61  TTSVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTG 120

Query: 98  NAVRFFQLYVYKRRDIAANLVQRAERKGYKAIVLTVDTPRLGRREADIKNKMISP---QL 154
             +RFFQLYVY+ R++ A LV+RAER G+KAI LTVDTPRLGRREADIKN+   P    L
Sbjct: 121 PGIRFFQLYVYRDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTL 180

Query: 155 KNLEGLISTQVVSDKGSSLEAYANQILDASLSWKDVRWLKSITNLPILIKGVLTREDATK 214
           KN EGL   ++     S L +Y    +D +LSWKD++WL++IT+LPIL+KGVLT ED   
Sbjct: 181 KNFEGLDLGKMDKSDDSGLSSYVAGQIDRTLSWKDIKWLQTITSLPILVKGVLTAEDTRL 240

Query: 215 AMEVGVDGIIVSNHGARQLDYTPATISALEEVVDAVRGKFPVLLDGGVRRGTDVFKXXXX 274
           A++ G  GIIVSNHGARQLDY PATI ALEEVV A +G+ PV LDGGVRRGTDVFK    
Sbjct: 241 AIQNGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALAL 300

Query: 275 XXXXXXXXRPVIYGLAVKGEHGARRVIEMLKDELELTMALSGCPSLTDITRTHVRTKHDI 334
                   RPV++ LA +GE G R+V++ML+DE ELTMALSGC SL +ITR H+ T  D+
Sbjct: 301 GASGIFIGRPVVFSLAAEGEAGIRKVLQMLRDEFELTMALSGCRSLREITRDHIVTDWDL 360


>29727.m000482 (S)-2-hydroxy-acid oxidase, putative
          Length = 300

 Score =  332 bits (850), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 169/237 (71%), Positives = 191/237 (80%), Gaps = 23/237 (9%)

Query: 105 LYVYKRRDIAANLVQRAERKGYKAIVLTVDTPRLGRREADIKNKMISPQLKNLEGLISTQ 164
           ++VYKRRDIAA LVQRAE+ GYKAIVLTVDTPR GR EADIKNK+I PQLKNLEGL++T 
Sbjct: 87  VFVYKRRDIAATLVQRAEKNGYKAIVLTVDTPRYGRGEADIKNKLIVPQLKNLEGLLTTA 146

Query: 165 VVSDKGSSLEAYANQILDASLSWKDVRWLKSITNLPILIKGVLTREDATKAMEVGVDGII 224
           V S+ GS LEA+ N+ LDAS  WKDV WLKSIT+LPILIKGVLT EDA KA+E+GV GII
Sbjct: 147 VASENGSGLEAF-NKTLDASFCWKDVEWLKSITDLPILIKGVLTGEDAVKAVEIGVSGII 205

Query: 225 VSNHGARQLDYTPATISALEEVVDAVRGKFPVLLDGGVRRGTDVFKXXXXXXXXXXXXRP 284
           VSNHGARQLDYTPATISALEEVV A+ G+ PVLLDGG+                    RP
Sbjct: 206 VSNHGARQLDYTPATISALEEVVHAIGGRVPVLLDGGI--------------------RP 245

Query: 285 VIYGLAVKGEHGARRVIEMLKDELELTMALSGCPSLTDITRTHVRTKHDIGKLQSML 341
           VIYGLAV+GEHG R+V++MLKDELELTMALS CPSL DITR+HVRT+ D  +LQSML
Sbjct: 246 VIYGLAVQGEHGVRQVMKMLKDELELTMALSACPSLKDITRSHVRTERD--RLQSML 300


>29727.m000485 (S)-2-hydroxy-acid oxidase, putative
          Length = 146

 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/153 (69%), Positives = 117/153 (76%), Gaps = 8/153 (5%)

Query: 189 DVRWLKSITNLPILIKGVLTREDATKAMEVGVDGIIVSNHGARQLDYTPATISALEEVVD 248
           DV WLKSIT L ILIKGVLT EDA KA+E+G+ GIIVSNHGARQLDYTPATISALEEVV 
Sbjct: 2   DVEWLKSITTLSILIKGVLTGEDAVKAVEIGIAGIIVSNHGARQLDYTPATISALEEVVH 61

Query: 249 AVRGKFPVLLDGGVRRGTDVFKXXXXXXXXXXXXRPVIYGLAVKGEHGARRVIEMLKDEL 308
           AV GK  VLLDGG+RR                  R VIY LAVKGE G R+V+++LKDEL
Sbjct: 62  AVGGKILVLLDGGIRR------ELMYSRHWHSIGRLVIYRLAVKGEDGVRQVMKILKDEL 115

Query: 309 ELTMALSGCPSLTDITRTHVRTKHDIGKLQSML 341
           ELTMALSGCPSL DITR+HVRT+ D  +LQSML
Sbjct: 116 ELTMALSGCPSLKDITRSHVRTERD--RLQSML 146