Jatropha Genome Database

JcCA0310951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310951.10 - phase: 0 
         (108 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006211 conserved hypothetical protein                           96   5e-21
30065.m001147 conserved hypothetical protein                           65   6e-12
28331.m000098 conserved hypothetical protein                           59   6e-10
30152.m002416 conserved hypothetical protein                           57   2e-09
29690.m000411 conserved hypothetical protein                           52   5e-08
30202.m000249 conserved hypothetical protein                           48   9e-07
30190.m010988 conserved hypothetical protein                           47   3e-06

>29908.m006211 conserved hypothetical protein
          Length = 183

 Score = 95.5 bits (236), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 23/108 (21%)

Query: 1   MGLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGTG 60
           MGL++ YDH +NQIL+MD FP+VN+ Y M+L V KQRE+H++                  
Sbjct: 55  MGLNDCYDHTRNQILVMDPFPTVNRAYFMLLSVEKQREIHNNY----------------- 97

Query: 61  YRRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYPKW 108
            + N  K G    +KK+   KE+++C+HC+T GH +DTCFK+HG P W
Sbjct: 98  NKDNMSKRGA---KKKD---KENKFCDHCRTKGHERDTCFKIHGVPDW 139


>30065.m001147 conserved hypothetical protein
          Length = 201

 Score = 65.1 bits (157), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 16/108 (14%)

Query: 1   MGLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGTG 60
           MGL++ Y+ V++Q+LLM+  P +N VY+MILR+ K R V++ ++  +++           
Sbjct: 39  MGLNDGYEAVRSQVLLMEPLPGINNVYSMILRIEKLRIVYNFVLDHAKS---------QS 89

Query: 61  YRRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYPKW 108
           YR++S ++       K + +   ++C +CK  GH K+  +KL GY  W
Sbjct: 90  YRKDSGEN-------KVYGKDLTKHCNYCKKDGHIKENSYKLIGYLDW 130


>28331.m000098 conserved hypothetical protein
          Length = 143

 Score = 58.5 bits (140), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 23/105 (21%)

Query: 2   GLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGTGY 61
           G++E Y  ++++I++M  FP++N+ Y M++R  KQR +  S                   
Sbjct: 40  GVNESYQAIRSRIIIMKPFPTINQAYNMVIREEKQRSLLAS------------------- 80

Query: 62  RRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHGYP 106
              ++ +   M  KK      D YC  C   GH KD C+K+ G+P
Sbjct: 81  -PQNFHESAAMAVKKSI---SDLYCTQCWKSGHLKDKCYKIIGFP 121


>30152.m002416 conserved hypothetical protein
          Length = 147

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 19/107 (17%)

Query: 1   MGLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVIL------ 54
           MGL++  D+++NQ+L MD FPS N  Y+M+ RV KQREV        E   +++      
Sbjct: 39  MGLNDSSDNMRNQVLEMDPFPSANIAYSMVFRVEKQREVPTIFPKTDEIVAMMIRAQNFK 98

Query: 55  --ARGGTGY-----RRNSYKDGKPMFRKKEFIR-----KEDRYCEHC 89
              +GG G      R  S +DG+   RK  + R     +E  +C+ C
Sbjct: 99  TTGKGGAGRGSWSGRNGSNRDGQEP-RKNNYKRYNGQEEEAMHCDFC 144


>29690.m000411 conserved hypothetical protein
          Length = 142

 Score = 52.4 bits (124), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 13/92 (14%)

Query: 17  MDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGTGYRRNSYKDGKPMFRKK 76
           MD  P++NK Y+MI +V KQR+V+ + I  S    + + +G     R   KDG      +
Sbjct: 1   MDPLPTINKAYSMIQKVEKQRQVNMTSIESSNGVALFMKQGNNQSYR---KDGNKKIAGR 57

Query: 77  EFIRKEDRYCEHCKTGGHTKDTCFKLHGYPKW 108
                        K   + KDT FKLH YP W
Sbjct: 58  ----------GGSKKNVYNKDTYFKLHRYPNW 79


>30202.m000249 conserved hypothetical protein
          Length = 253

 Score = 48.1 bits (113), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 38/58 (65%)

Query: 2   GLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGT 59
           GL  ++  +++QI++M++FPSV++ Y+M+LR   QR +H      ++  ++ + +G +
Sbjct: 194 GLDGFFQGLRSQIMIMNQFPSVDQAYSMVLRKESQRSIHLQSQTSNDAAIMAVKKGNS 251


>30190.m010988 conserved hypothetical protein
          Length = 138

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 2   GLSEYYDHVKNQILLMDRFPSVNKVYTMILRVAKQREVHHSLIVLSETTVVILARGGTGY 61
            L + +D ++N +L M   P + + + M+     QRE    + +L +     L  G    
Sbjct: 33  ALDQIFDSIRNDLLRMKPIPGIKECFNMV-----QREAQRQVTMLGKRE---LGEGSHMA 84

Query: 62  RRNSYKDGKPMFRKKEFIRKEDRYCEHCKTGGHTKDTCFKLHG 104
             +     K   R  E   K+   C HC    HTKDT F++HG
Sbjct: 85  MISKTSISKTTLRAIEDAEKDKLRCSHCNGTRHTKDTYFEIHG 127