Jatropha Genome Database

JcCA0310371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310371.10 - phase: 0 
         (176 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005582 conserved hypothetical protein                          170   3e-43
29807.m000498 conserved hypothetical protein                          162   6e-41
28320.m001114 conserved hypothetical protein                          105   1e-23
29968.m000651 ATEXPB4, putative                                        82   1e-16
30003.m000331 conserved hypothetical protein                           80   5e-16

>29912.m005582 conserved hypothetical protein
          Length = 140

 Score =  170 bits (430), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 78/117 (66%), Positives = 95/117 (81%)

Query: 60  SHGDVGTAAHYSPPYLPTACYGNDESQFPSSNLFAAASEGIWDNGAACGRQYLVRCISAV 119
           S GDVGTAA + PPYLPTAC+GND S FP +NLFAAA EGIWDNG++CGR+Y V CISA 
Sbjct: 23  SFGDVGTAAQFGPPYLPTACFGNDASAFPPNNLFAAAGEGIWDNGSSCGREYYVSCISAA 82

Query: 120 APNTCNREKIIRVRIVDRAQTSVSRPSRNGATIILSDIAFAQIASPSVSSVNVEFQQ 176
              TC  ++ IRV+IVDRAQTSV+RPSR GATI+LS++ F +IA+P+   VNVE+QQ
Sbjct: 83  VRGTCKPDQTIRVKIVDRAQTSVTRPSRPGATIVLSEVGFGKIANPAAPYVNVEYQQ 139


>29807.m000498 conserved hypothetical protein
          Length = 189

 Score =  162 bits (411), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 95/124 (76%)

Query: 53  IATLFPVSHGDVGTAAHYSPPYLPTACYGNDESQFPSSNLFAAASEGIWDNGAACGRQYL 112
           I+ L   SHGDVGTA+ YSPPYLPT CY ND SQFP +NLFAAA +GIWDNGA+CGR+YL
Sbjct: 22  ISLLLSTSHGDVGTASQYSPPYLPTTCYDNDASQFPPNNLFAAAGDGIWDNGASCGREYL 81

Query: 113 VRCISAVAPNTCNREKIIRVRIVDRAQTSVSRPSRNGATIILSDIAFAQIASPSVSSVNV 172
           VRCISA    +C  ++ I+V+IVD A ++   PS +G TIILS+ AF  IA+ S +S+N+
Sbjct: 82  VRCISASVAGSCQPDQTIQVKIVDYAFSTPIPPSASGTTIILSETAFGIIANSSATSINI 141

Query: 173 EFQQ 176
           EFQQ
Sbjct: 142 EFQQ 145


>28320.m001114 conserved hypothetical protein
          Length = 143

 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 73/115 (63%), Gaps = 7/115 (6%)

Query: 62  GDVGTAAHYSPPYLPTACYGNDESQFPSSNLFAAASEGIWDNGAACGRQYLVRCISAVAP 121
           GD+G+A  Y PPYLPT C G  E QFP    F AASEGIWDNGAACGR+Y +RCIS   P
Sbjct: 22  GDIGSATSYDPPYLPTRCKGYSEDQFPQGGYFVAASEGIWDNGAACGRKYRMRCIS--GP 79

Query: 122 NTCNREKIIRVRIVDRAQTSVSRPSRNGATIILSDIAFAQIASPSVSSVNVEFQQ 176
               +++ I V++VD     + R +   +T++LS+ AF+ I+      +NVEF Q
Sbjct: 80  RRPCKDESIVVQVVD-----LCRGNPCPSTLVLSNKAFSAISKVPAIKINVEFAQ 129


>29968.m000651 ATEXPB4, putative
          Length = 136

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 65/116 (56%), Gaps = 13/116 (11%)

Query: 63  DVGTAAHYSPPYLPTACYGNDESQFPSSNLFAAASEGIWDNGAACGRQYLVRCISAVA-- 120
           D GTA  Y+PPY P++CYGN         + AAAS+ IWDN AACGR+Y V C+ A    
Sbjct: 30  DEGTATFYTPPYTPSSCYGNSNEGV----MIAAASDAIWDNRAACGRKYRVTCLGATNNG 85

Query: 121 -PNTCNREKIIRVRIVDRAQTSVSRPSRNGATIILSDIAFAQIASPSVSSVNVEFQ 175
            P+ CN    + V+IVD   +    P   G TI LS  AFA IA+P    + + ++
Sbjct: 86  DPHPCNGNS-VAVKIVDYCPS----PGCQG-TIDLSQEAFASIANPDAGKIKIAYK 135


>30003.m000331 conserved hypothetical protein
          Length = 139

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 14/115 (12%)

Query: 65  GTAAHYSPPYLPTACYGNDESQFPSSNLFAAASEGIWDNGAACGRQYLVRCISAV---AP 121
           GTA +Y+  YLP+ACYG ++       + AAASE IW+NGAACG+ Y V CIS      P
Sbjct: 33  GTATYYTT-YLPSACYGYEDQGV----MIAAASEAIWNNGAACGQMYQVNCISGTNEGTP 87

Query: 122 NTCNREKIIRVRIVDRAQTSVSRPSRNGATIILSDIAFAQIASPSVSSVNVEFQQ 176
             C     + V+IVDR       P+    TI LS  AFA IA P+   +++ +QQ
Sbjct: 88  FPCWASGSVVVKIVDRC------PASCRGTIDLSQEAFASIADPNSGVIHITYQQ 136