Jatropha Genome Database
- JcCA0310021.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0310021.20 + phase: 1 /partial
(237 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30076.m004542 hypothetical protein 192 1e-49
30128.m008988 conserved hypothetical protein 124 3e-29
30138.m004021 DNA binding protein, putative 109 1e-24
30170.m013852 conserved hypothetical protein 97 5e-21
30174.m008814 DNA binding protein, putative 97 7e-21
30115.m001235 conserved hypothetical protein 94 4e-20
30204.m001816 Phytochrome-interacting factor, putative 92 2e-19
29739.m003684 DNA-directed RNA polymerase beta chain, putative 77 5e-15
29737.m001209 conserved hypothetical protein 74 9e-14
30170.m013749 transcription factor, putative 66 1e-11
29598.m000464 conserved hypothetical protein 64 4e-11
30131.m007045 conserved hypothetical protein 62 2e-10
30170.m013667 DNA binding protein, putative 62 2e-10
28152.m000914 DNA binding protein, putative 62 2e-10
29736.m002076 DNA binding protein, putative 62 3e-10
30147.m014038 DNA binding protein, putative 60 7e-10
30138.m003881 conserved hypothetical protein 59 1e-09
30147.m014428 DNA binding protein, putative 58 4e-09
28609.m000209 DNA binding protein, putative 58 4e-09
30183.m001293 transcription factor, putative 57 5e-09
29883.m002023 DNA binding protein, putative 57 5e-09
29827.m002528 Transcription factor AtMYC2, putative 57 7e-09
29447.m000032 transcription factor, putative 57 9e-09
30152.m002405 DNA binding protein, putative 56 1e-08
30169.m006403 DNA binding protein, putative 55 2e-08
29216.m000261 DNA binding protein, putative 55 2e-08
29647.m002101 conserved hypothetical protein 55 2e-08
29742.m001404 DNA binding protein, putative 55 3e-08
28179.m000479 DNA binding protein, putative 54 5e-08
29660.m000750 conserved hypothetical protein 53 9e-08
30068.m002581 DNA binding protein, putative 53 1e-07
30138.m003899 conserved hypothetical protein 53 1e-07
29804.m001498 DNA binding protein, putative 53 1e-07
29974.m000242 DNA binding protein, putative 53 1e-07
27964.m000352 DNA binding protein, putative 52 2e-07
29912.m005337 DNA binding protein, putative 52 2e-07
30198.m000869 DNA binding protein, putative 52 2e-07
27469.m000162 DNA binding protein, putative 52 2e-07
30136.m001043 hypothetical protein 51 4e-07
28179.m000478 DNA binding protein, putative 51 4e-07
29883.m001988 DNA binding protein, putative 50 6e-07
30128.m009052 conserved hypothetical protein 50 7e-07
30149.m000231 DNA binding protein, putative 50 1e-06
30066.m000752 hypothetical protein 49 2e-06
29646.m001078 conserved hypothetical protein 49 2e-06
29693.m002046 conserved hypothetical protein 49 2e-06
30147.m014419 Transcription factor ICE1, putative 49 2e-06
30138.m003913 Transcription factor BIM1, putative 49 2e-06
29970.m001001 hypothetical protein 49 3e-06
30066.m000713 DNA binding protein, putative 48 3e-06
29814.m000735 hypothetical protein 47 5e-06
27964.m000356 transcription factor, putative 47 9e-06
>30076.m004542 hypothetical protein
Length = 584
Score = 192 bits (488), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 150/230 (65%), Gaps = 13/230 (5%)
Query: 4 AASASVCSLGASNDLSYSSLKTITEDMGRMTSENEHA-EDQQVPKPASARAGAKRRPTPR 62
AA+ S+CS ASNDL++SSLK + M S +E+A E++++PK S K++ P+
Sbjct: 328 AAATSICSRRASNDLTHSSLKRTNAHLKEMASPSENADEEEEIPKSTST----KKKRIPQ 383
Query: 63 VHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFW 122
VHSLSERKRR KINKKMR LQAL+PNSDKVDKAS+LD AIEYLKTLQLQ+Q+MSM +
Sbjct: 384 VHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQLQLQMMSMRGSCY 443
Query: 123 MPQMMLPNAMQQIH--NLAHFSP-MGIRMGMGVGSFQNPAVLGFPA-RILPMQMSVPQPP 178
MP MM+P A+QQI L+HFSP MG+RM M F N A+LG A ++ PM Q P
Sbjct: 444 MPPMMIPTALQQIQAPYLSHFSPMMGMRMPMSPSLFSNSAILGLAAGQMQPMAPMTSQTP 503
Query: 179 FLPFVGGGGSSMLHPSVPVTANSGIATPMGQIRGNSAPLFSLNLKENSSN 228
F+P V GGSSM S VT G A M A FS NLKE N
Sbjct: 504 FVPLV--GGSSMQSTST-VTPFCGAAAAMPVKPIGLADPFS-NLKEAVQN 549
>30128.m008988 conserved hypothetical protein
Length = 758
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 11/149 (7%)
Query: 5 ASASVCSLGASNDLSYSSLKTITEDMGRMTSENE----HAEDQQV----PKPASARAGAK 56
AS+SVCS + +S ++ + R T E+E E++ V PA G+K
Sbjct: 404 ASSSVCSGNSMERVSDEPMQNLKRKH-RETEESEGPSEDVEEESVGGKKAAPARGGTGSK 462
Query: 57 RRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMS 116
R VH+LSER+RR +IN+KMR LQ L+PN +KVDKAS+LD AIEYLKTLQLQVQIMS
Sbjct: 463 RSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 522
Query: 117 MGSRFWMPQMMLPNAMQQIH--NLAHFSP 143
MG+ +MP MMLP + +H +++ FSP
Sbjct: 523 MGAGLYMPSMMLPPGVPHMHVAHMSQFSP 551
>30138.m004021 DNA binding protein, putative
Length = 440
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 21/195 (10%)
Query: 4 AASASVCSLGASNDLSYSSL---------KTITEDMGRMTSENEHAEDQQVPKPASARAG 54
+ASA+ C + ++++S KT ED ED++ K + R+
Sbjct: 183 SASATFCRESDTTMMTWASFESPPPSLKAKTTDEDSASHGGSENQDEDRET-KTETVRSH 241
Query: 55 AKRRP-TPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQ 113
+ RR VH+ SER+RR +IN+KM+ LQ L+PN+ K DKAS+LD IEYLK LQ QVQ
Sbjct: 242 SSRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQ 301
Query: 114 IMSMGSRFWMPQMMLPNAMQQIHNLAHFS--PMGIRMGMGVG-----SFQNPAVLGFPAR 166
MS+ + MPQMM+P MQQ ++ + MG+ +GMG+G + + A P
Sbjct: 302 AMSVRN---MPQMMMPLGMQQQLQMSLLARMGMGVSLGMGMGMLDMSNMAHSAPQSLPPF 358
Query: 167 ILPMQMSVPQPPFLP 181
I P Q + P F+P
Sbjct: 359 IHPTQAAASAPTFVP 373
>30170.m013852 conserved hypothetical protein
Length = 312
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
Query: 25 TITEDMGRMTSENEH-AEDQQVP-KPASARAGAKRRPTPRVHSLSERKRRHKINKKMREL 82
++ D+G ++ ++E AE +VP + R +KR VH+LSE++RR +IN+KM+ L
Sbjct: 89 SMENDLGDLSCDSEKGAEVAEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKAL 148
Query: 83 QALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWMPQMMLPNAMQ 133
Q L+PNS+K DKAS+LD AIEYLK LQLQVQ+++M + + M LP +Q
Sbjct: 149 QNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPMCLPGVLQ 199
>30174.m008814 DNA binding protein, putative
Length = 465
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 85/160 (53%), Gaps = 19/160 (11%)
Query: 39 HAEDQQVPKP-ASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASV 97
H++D K + KR +H+ SERKRR KIN++M+ LQ L+PNS K DKAS+
Sbjct: 262 HSDDDDKQKANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASM 321
Query: 98 LDNAIEYLKTLQLQVQIMSMGSRFWMPQMMLPNAMQQIHNLAHFSPMGIRMGM-GVG--- 153
LD IEYLK LQ QVQ+M SR + +MLP MQQ ++ +PM + MG+ G+G
Sbjct: 322 LDEVIEYLKQLQAQVQMM---SRMNIQPVMLPMTMQQQLQMSMLAPMNMGMGLAGIGMNV 378
Query: 154 ----SFQNPAVLGFPARILPMQMSVPQPPFLPFVGGGGSS 189
+ P + G + P F+P GSS
Sbjct: 379 MDMNTISRPNIAGISPVLHPTA-------FMPMTSWDGSS 411
>30115.m001235 conserved hypothetical protein
Length = 406
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 63/87 (72%)
Query: 47 KPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLK 106
K A R+ +KR VH+LSE++RR +IN+KM+ LQ L+PNS+K DKAS+LD AIEYLK
Sbjct: 149 KAAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLK 208
Query: 107 TLQLQVQIMSMGSRFWMPQMMLPNAMQ 133
LQLQVQ++S+ + + M LP +Q
Sbjct: 209 QLQLQVQMLSLRNGIGLHPMCLPGVLQ 235
>30204.m001816 Phytochrome-interacting factor, putative
Length = 572
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 28 EDMGRMTSENEHAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLP 87
E+ SE+ E K A KR VH+LSER+RR +IN+KMR LQ L+P
Sbjct: 329 EETEYYHSEDVEFESADAKKQARGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIP 388
Query: 88 NSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWMPQMMLPNAMQ 133
+K DKAS+LD AIEYLK+LQLQVQ+MSMG M MM P Q
Sbjct: 389 RCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCS--MVPMMFPGIQQ 432
>29739.m003684 DNA-directed RNA polymerase beta chain, putative
Length = 592
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 52 RAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQ 111
R A+R HS++ER RR KI ++M+ LQ L+PNS KVDKAS+LD IEY+K LQLQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQLQ 409
Query: 112 VQIMSMGSRFWMPQMMLP 129
V+++SM SR ++P
Sbjct: 410 VKVLSM-SRLGATGAVIP 426
>29737.m001209 conserved hypothetical protein
Length = 474
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 10/82 (12%)
Query: 46 PKPASARAGAKRRPTPRV----------HSLSERKRRHKINKKMRELQALLPNSDKVDKA 95
P+ + + GA +P RV HS++ER RR +I ++M+ LQ L+PN++K DKA
Sbjct: 239 PQASGSTGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKA 298
Query: 96 SVLDNAIEYLKTLQLQVQIMSM 117
S+LD I+Y+K LQLQV+++SM
Sbjct: 299 SMLDEIIDYVKFLQLQVKVLSM 320
>30170.m013749 transcription factor, putative
Length = 327
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 28 EDMGRMTSENEHAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLP 87
ED S + + + ARAG P SL RKRR +IN+++R LQ L+P
Sbjct: 214 EDNASQDSNGDSKVSEALNSKGKARAGRGSATDP--QSLYARKRRERINERLRILQNLVP 271
Query: 88 NSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWMPQMMLPNAMQ 133
N KVD +++L+ A++Y+K LQLQ++++S WM + N M
Sbjct: 272 NGTKVDISTMLEEAVQYVKFLQLQIKLLS-SDDLWMYAPIAYNGMD 316
>29598.m000464 conserved hypothetical protein
Length = 326
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%)
Query: 52 RAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQ 111
R A+R HS++ER RR +I ++M+ LQ L+P ++K D+A+++D ++Y+K L+LQ
Sbjct: 162 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLRLQ 221
Query: 112 VQIMSM 117
V+++SM
Sbjct: 222 VKVLSM 227
>30131.m007045 conserved hypothetical protein
Length = 444
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 38 EHAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVD-KAS 96
++++ +V KP A+R HSL+ER RR KI+++M+ LQ L+P +K+ KA
Sbjct: 219 DNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 278
Query: 97 VLDNAIEYLKTLQLQVQIMSM 117
+LD I Y+++LQ QV+ +SM
Sbjct: 279 MLDEIINYVQSLQRQVEFLSM 299
>30170.m013667 DNA binding protein, putative
Length = 408
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 32 RMTSENEHAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK 91
+ EN H+ + PK A+R HSL+ER RR KI+++MR LQ L+P +K
Sbjct: 223 KQAKENSHS--GEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 280
Query: 92 VD-KASVLDNAIEYLKTLQLQVQIMSM 117
+ KA +LD I Y+++LQ QV+ +SM
Sbjct: 281 ITGKAVMLDEIINYVQSLQQQVEFLSM 307
>28152.m000914 DNA binding protein, putative
Length = 296
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQI 114
A R S+ RKRR +IN+++R LQ L+PN KVD +++L+ A+ Y+K LQLQ+++
Sbjct: 209 ASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKL 268
Query: 115 MSMGSRFWMPQMMLPNAMQ 133
+S WM + N M
Sbjct: 269 LS-SDDLWMYAPLAYNGMD 286
>29736.m002076 DNA binding protein, putative
Length = 265
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 3 KAASASVCSLGASNDLSYSSLKT---ITEDMGRMT----SENEHAEDQ----QVPKPASA 51
K S+S + A ND LKT + E+ + S +H E ++PK
Sbjct: 77 KVVSSSNGNGNAVNDSDAKRLKTSGNLDENHDSKSEAEPSSGKHVEQNTQPPELPKQDYI 136
Query: 52 RAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKV-DKASVLDNAIEYLKTLQL 110
A+R HSL+ER RR KI+++M+ LQ L+P +KV KA VLD I Y+++LQ
Sbjct: 137 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 196
Query: 111 QVQIMSM 117
QV+ +SM
Sbjct: 197 QVEFLSM 203
>30147.m014038 DNA binding protein, putative
Length = 275
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 46 PKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKV-DKASVLDNAIEY 104
PK A+R HSL+ER RR KI+++M+ LQ L+P +KV KA VLD I Y
Sbjct: 139 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 198
Query: 105 LKTLQLQVQIMSM 117
+++LQ QV+ +SM
Sbjct: 199 IQSLQRQVEFLSM 211
>30138.m003881 conserved hypothetical protein
Length = 566
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 46 PKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKV-DKASVLDNAIEY 104
PK A+R HSL+ER RR KI+++M+ LQ L+P KV KA +LD I Y
Sbjct: 364 PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 423
Query: 105 LKTLQLQVQIMSM 117
+++LQ QV+ +SM
Sbjct: 424 VQSLQRQVEFLSM 436
>30147.m014428 DNA binding protein, putative
Length = 422
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 44 QVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVD-KASVLDNAI 102
Q P A+R HSL+ER RR KI+++M+ LQ L+P DKV KA +LD I
Sbjct: 163 QEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEII 222
Query: 103 EYLKTLQLQVQIMSM 117
Y+++LQ QV+ +SM
Sbjct: 223 NYVQSLQNQVEFLSM 237
>28609.m000209 DNA binding protein, putative
Length = 327
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 49 ASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTL 108
A+ + K P+ S++ + RR +I+++++ LQ L+PN KVD ++L+ AI Y+K L
Sbjct: 221 ATKKQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFL 280
Query: 109 QLQVQIMSMGSRFW 122
QLQV++++ FW
Sbjct: 281 QLQVKVLAT-DEFW 293
>30183.m001293 transcription factor, putative
Length = 534
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVD-KASVLDNAIEYLKTLQLQVQ 113
A+R HSL+ER RR KI+++M+ LQ L+P +KV KA +LD I Y+++LQ QV+
Sbjct: 348 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 407
Query: 114 IMSM 117
+SM
Sbjct: 408 FLSM 411
>29883.m002023 DNA binding protein, putative
Length = 503
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 51 ARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQL 110
R A R P H +ER+RR K+N++ L+A++PN K+DKAS+L +AI Y+ LQ
Sbjct: 345 GRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQT 404
Query: 111 QVQIM 115
+++++
Sbjct: 405 KIRVL 409
>29827.m002528 Transcription factor AtMYC2, putative
Length = 663
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 51 ARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQL 110
R A R P H +ER+RR K+N++ L+A++PN K+DKAS+L +AI Y+K L+
Sbjct: 473 GRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELRT 532
Query: 111 QVQ 113
++Q
Sbjct: 533 KLQ 535
>29447.m000032 transcription factor, putative
Length = 554
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVD-KASVLDNAIEYLKTLQLQVQ 113
A+R HSL+ER RR KI+++M+ LQ L+P +KV KA +LD I Y+++LQ QV+
Sbjct: 352 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 411
Query: 114 IMSM 117
+SM
Sbjct: 412 FLSM 415
>30152.m002405 DNA binding protein, putative
Length = 432
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLDNAIEYLKTLQLQVQ 113
AKR S++ER RR +I+++MR+LQ L PN DK + A +LD A+EY+K LQ QV+
Sbjct: 352 AKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQVK 411
Query: 114 IM 115
+
Sbjct: 412 TL 413
>30169.m006403 DNA binding protein, putative
Length = 418
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 45 VPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLDNAIE 103
VP A+ G P S++ER RR +I+++MR+LQ L+PN DK + + +LD A++
Sbjct: 335 VPCKIRAKRGCATHP----RSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVD 390
Query: 104 YLKTLQLQVQIMS 116
Y+K LQ QV+ +S
Sbjct: 391 YIKDLQRQVETLS 403
>29216.m000261 DNA binding protein, putative
Length = 355
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 39 HAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASV 97
H +D VP A+ G P S++ER RR +I+++MR+LQ L+PN DK + A +
Sbjct: 262 HFQDS-VPCKIRAKRGCATHP----RSIAERVRRTRISERMRKLQELVPNMDKQTNTADM 316
Query: 98 LDNAIEYLKTLQLQVQIMS 116
LD A++Y+K LQ Q + +S
Sbjct: 317 LDLAVDYIKDLQKQYKTLS 335
>29647.m002101 conserved hypothetical protein
Length = 668
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Query: 37 NEHAEDQQVPKPASARAGAKRRPTPRV-------HSLSERKRRHKINKKMRELQALLPNS 89
+++ E+ PK A A ++ R H L+ER+RR K+N++ L++L+P
Sbjct: 447 HKYREENNSPKSRDADAASRFRKATAAQEELSANHVLAERRRREKLNERFIILRSLVPFV 506
Query: 90 DKVDKASVLDNAIEYLKTLQLQVQIMSMGSR 120
K+DKAS+L + IEY+K L+ ++Q + +R
Sbjct: 507 TKMDKASILGDTIEYVKQLRKKIQDLEARNR 537
>29742.m001404 DNA binding protein, putative
Length = 615
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQI 114
A R P H +ER+RR K+N++ L+A++PN K+DKAS+L +AI Y+ LQ +++
Sbjct: 438 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKS 497
Query: 115 M 115
M
Sbjct: 498 M 498
>28179.m000479 DNA binding protein, putative
Length = 299
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 50 SARAGAKRRP--TPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKT 107
+ +AGA R + H ++ERKRR K++++ L A++P K+DKASVL +AI+YLK
Sbjct: 163 TKKAGASTRSPLHAQDHVIAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKH 222
Query: 108 LQLQVQIM 115
LQ +V+ +
Sbjct: 223 LQERVKTL 230
>29660.m000750 conserved hypothetical protein
Length = 271
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%)
Query: 68 ERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQI 114
E+KRR++I K++ L L+PN K D AS+L +AI+Y+++LQLQ+ +
Sbjct: 121 EKKRRNRIRDKLKALGELIPNCHKQDTASILVHAIDYIRSLQLQIYV 167
>30068.m002581 DNA binding protein, putative
Length = 479
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 14 ASNDLSYSSLKTITEDMGRMTSENEHAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRH 73
A+NDL SS D G S+ A + R K + P H +ER+RR
Sbjct: 261 ATNDLGRSS-----SDSGPFDSDGNFAVESTDRIKKRGRKPVKGKELPLNHVEAERQRRE 315
Query: 74 KINKKMRELQALLPNSDKVDKASVLDNAIEYLK-------TLQLQVQIMSMGSRF 121
++N + L++++PN K+DKAS+L +A+ Y++ L+ QVQ++S S+
Sbjct: 316 RLNNRFYALRSVVPNVSKMDKASLLADAVTYIQELKAKVDELKTQVQLVSKKSKI 370
>30138.m003899 conserved hypothetical protein
Length = 348
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSD-KVDKASVLDNAIEYLKTLQLQVQIMSMGSRFW 122
HS++E++RR KIN++ + L+ L+P+SD K D AS L IEY++ LQ +VQ + W
Sbjct: 56 HSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGW 115
Query: 123 --MPQMMLP--NAMQQIHN-LAHFSPMGIRMGMGVGS 154
P ++P N+ ++ + + H P I+ G G GS
Sbjct: 116 SSEPTKLMPWRNSHWRVQSFIGH--PQPIKNGSGPGS 150
>29804.m001498 DNA binding protein, putative
Length = 309
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Query: 50 SARAGAKRRPT---------PRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDN 100
+A GAKR T + H ++ERKRR K++++ L A++P K+DKASVL +
Sbjct: 109 NACQGAKRISTNNNNGRISQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGD 168
Query: 101 AIEYLKTLQLQVQIM 115
AI+YLK LQ +V+ +
Sbjct: 169 AIKYLKQLQERVKTL 183
>29974.m000242 DNA binding protein, putative
Length = 190
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 41 EDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLD 99
ED + PK A+R HSL+ER RR KIN+++R LQ ++P K + A +LD
Sbjct: 62 EDDEKPKEV-VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLD 120
Query: 100 NAIEYLKTLQLQVQIMSM 117
I Y+++LQ QV+ +SM
Sbjct: 121 EIINYVQSLQNQVEFLSM 138
>27964.m000352 DNA binding protein, putative
Length = 486
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 42 DQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNA 101
D++ PK R A R TP H +ER RR K+N + L+A++PN ++DKAS+L +A
Sbjct: 288 DKKTPKK-RGRKPALGRDTPLNHVEAERLRREKLNHRFYALRAVVPNVSRMDKASLLSDA 346
Query: 102 IEYLKTLQLQVQ 113
+ Y+ L+ +++
Sbjct: 347 VCYINELKAKIE 358
>29912.m005337 DNA binding protein, putative
Length = 502
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 33/53 (62%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMS 116
H +SERKRR KIN+ L+ LLP K DKASVL EYL L+ QV +S
Sbjct: 318 HMISERKRREKINESFEALRKLLPPEAKKDKASVLTRTREYLTLLKTQVAELS 370
>30198.m000869 DNA binding protein, putative
Length = 213
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 12/83 (14%)
Query: 42 DQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNA 101
D P A++ A +K + +SER RR K+N+++ L+A++PN K+DKAS++ +A
Sbjct: 21 DSSSPDGAASSAASK-------NIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDA 73
Query: 102 IEYLKTL-----QLQVQIMSMGS 119
I+Y++ L ++Q +IM + S
Sbjct: 74 IDYIQDLHEQERRIQAEIMELES 96
>27469.m000162 DNA binding protein, putative
Length = 267
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLDNAIEYLKTLQLQVQ 113
AKR HS++ER RR KIN K+R LQ L+P K + A +L+ I Y+ +LQ QV+
Sbjct: 151 AKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQVE 210
Query: 114 IMSM 117
+SM
Sbjct: 211 FLSM 214
>30136.m001043 hypothetical protein
Length = 207
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%)
Query: 65 SLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
S++ R RR +I++K+R LQ L+P K+D AS+LD AI Y+K L+ Q++++
Sbjct: 110 SVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKKQIRLL 160
>28179.m000478 DNA binding protein, putative
Length = 331
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
H L+ERKRR K++++ L AL+P K+DKASVL +AI+++K LQ +V+++
Sbjct: 156 HILAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKHVKQLQERVKML 207
>29883.m001988 DNA binding protein, putative
Length = 299
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 48/66 (72%)
Query: 52 RAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQ 111
R A+R HS++ER RR +I +++R LQ L+P+ +K D+A++LD ++Y+K L+LQ
Sbjct: 136 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 195
Query: 112 VQIMSM 117
V+++SM
Sbjct: 196 VKVLSM 201
>30128.m009052 conserved hypothetical protein
Length = 297
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 51 ARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVD-KASVLDNAIEYLKTLQ 109
AR G P HSL+ER RR KI+ +M+ LQ+L+P DK+ KA +LD I ++ +LQ
Sbjct: 166 ARRGEATDP----HSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRHVLSLQ 221
Query: 110 LQVQIMS 116
QV+ ++
Sbjct: 222 NQVEFLA 228
>30149.m000231 DNA binding protein, putative
Length = 377
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 42 DQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLDN 100
+ VP A+ G P S++ER+RR +I+ ++++LQ L+PN DK A +LD
Sbjct: 292 EDSVPCKIRAKRGCATHP----RSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDL 347
Query: 101 AIEYLKTLQLQVQIM 115
A++++K LQ +VQ +
Sbjct: 348 AVQHIKGLQGEVQKL 362
>30066.m000752 hypothetical protein
Length = 243
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 56 KRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
++R + + ++ ER+RR +I KM+ L+ L+P+ K D+AS+LD+AI YLK L+L V+++
Sbjct: 79 RKRISADMRNIYERRRRDRIRDKMKSLRELIPHCHKQDRASMLDDAINYLKALKLHVEML 138
Query: 116 S-MGSRFWMPQ 125
+ MG R + Q
Sbjct: 139 ANMGGRGALCQ 149
>29646.m001078 conserved hypothetical protein
Length = 265
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 62 RVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRF 121
R H +ERKRR +IN + L++L+P + K+DKAS+L I+Y+K L++ +S G
Sbjct: 72 RNHCEAERKRRARINAHLDTLRSLVPGAKKMDKASLLAEVIKYMKELKMTAAGVSEG--L 129
Query: 122 WMP 124
MP
Sbjct: 130 LMP 132
>29693.m002046 conserved hypothetical protein
Length = 239
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 39/55 (70%)
Query: 65 SLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGS 119
S S ++R K+ K ++ L+ ++P D+++ +VLD A+ YLK+L+++VQ + +G+
Sbjct: 182 SCSTERKRQKMKKMVKALRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKIGVGN 236
>30147.m014419 Transcription factor ICE1, putative
Length = 549
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 36/48 (75%)
Query: 61 PRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTL 108
P + ++ER+RR K+N ++ L++++P K+D+AS+L +AIEYLK L
Sbjct: 360 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKEL 407
>30138.m003913 Transcription factor BIM1, putative
Length = 567
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 46/223 (20%)
Query: 22 SLKTITEDMGRMTSENEHAEDQQVPKP---------ASARAGAKRRPTPRV-HSLSERKR 71
S K ++D ++ E E ++ P P ++ ++ TPR HS +E++R
Sbjct: 217 SAKDSSQD-DKLDEEEEFVLKKETPSPIRKGELRVKVDGKSTDQKANTPRSKHSATEQRR 275
Query: 72 RHKINKKMRELQALLPNSD-KVDKASVLDNAIEYLKTLQLQVQIMSMGSRFW--MPQMML 128
R KIN + + L+ L+P+ D K DKAS L IEY++ L +V + W P ++
Sbjct: 276 RSKINDRFQMLRELIPHGDQKRDKASFLLEVIEYIQFLHEKVHKYEGSYQRWNNEPAKLV 335
Query: 129 P--NAMQQIHNLAHFSPMGIRMGMGVGSFQNPAVLGFPARILPMQMSVPQPPFLPFVGGG 186
P N + + + + G S +PA+L F A++ ++
Sbjct: 336 PWRNGSRSVESY-------VDQSRGSNSGASPALL-FAAKLEEKNIN------------- 374
Query: 187 GSSMLHPSVPVTANSGIATPMGQIRGNSAPLFSLNLKENSSNK 229
L PSVP +A + + + + NSA F ++ +NK
Sbjct: 375 ----LSPSVPGSAQNRVESDV-----NSATTFMVDHYPGMTNK 408
>29970.m001001 hypothetical protein
Length = 238
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWM 123
H LSER+RR IN++ +EL+ LLP+ DK S+L EYL +LQ V +S ++
Sbjct: 121 HILSERRRREMINERFQELRKLLPSKVNKDKVSILTQTREYLASLQDLVAKLSQKNQQLE 180
Query: 124 PQMM 127
Q++
Sbjct: 181 SQLV 184
>30066.m000713 DNA binding protein, putative
Length = 189
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLDNAIEYLKTLQLQVQ 113
AKR HSL+ER RR +IN+K+R LQ L+P K + A +LD I Y+++LQ Q++
Sbjct: 123 AKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIE 182
Query: 114 I 114
+
Sbjct: 183 V 183
>29814.m000735 hypothetical protein
Length = 288
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 48 PASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKT 107
P A K + HS +E++RR +IN ++ L+ L+P S+K+DKA++L +AI+ +K
Sbjct: 72 PVQDSAENKAASVSKSHSQAEKRRRDRINTQLGILRKLIPKSEKMDKAALLGSAIDQVKD 131
Query: 108 LQ---LQV-QIMSMGSRFWMPQMMLPNAMQQIHNL-----AHFSPMGIRMGMGVGSFQNP 158
L+ ++V + +++ + F + + ++ +L AH I + + V P
Sbjct: 132 LKGKAMEVSKTITIPTEFDEVTVDIDDSNDVFQHLSTTSTAHKDKDNIFIRVSVCCDDRP 191
Query: 159 AVLGFPARILP-MQMSVPQPPFLPFVGGGGSSML 191
V R+L +++S+ + + VGG S+L
Sbjct: 192 EVFSELIRVLKGLRLSIVRAD-ISSVGGRVKSIL 224
>27964.m000356 transcription factor, putative
Length = 288
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQV 112
H +ER+RR K+N + L+A++PN ++DKAS+L +A+ Y+ L+ ++
Sbjct: 110 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINDLKAKI 158