Jatropha Genome Database

JcCA0308991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308991.10 - phase: 0 /partial
         (211 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28093.m000125 conserved hypothetical protein                          325   8e-90
29863.m001061 conserved hypothetical protein                          269   6e-73
29912.m005506 conserved hypothetical protein                          257   3e-69
30170.m014026 conserved hypothetical protein                          238   1e-63

>28093.m000125 conserved hypothetical protein
          Length = 258

 Score =  325 bits (834), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 167/225 (74%), Positives = 175/225 (77%), Gaps = 14/225 (6%)

Query: 1   MPEEKEESTSIPLSHAENGGEEPEDPAKXXXXXXXXXTRE--------------MTGCVV 46
           M EEK+ESTSIPLS  EN  E+PEDPAK         TRE              MTGCVV
Sbjct: 1   MAEEKDESTSIPLSRPENVCEDPEDPAKSPPSSSNSSTREACCFILQSWVSKKFMTGCVV 60

Query: 47  LFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXXWIGSNV 106
           LFPIAVTFFITWWLIQFVDGFFSPIYERLGIDI                     WIGSNV
Sbjct: 61  LFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIFGLGFVTSLVFVFFVGVFVSSWIGSNV 120

Query: 107 FWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFGFITSTV 166
           FWLGEWFIKRMPFV+HLYSASKQISAAI+P QNTTAFKEVAIIRHPR+GEYAFGFITSTV
Sbjct: 121 FWLGEWFIKRMPFVKHLYSASKQISAAIAPDQNTTAFKEVAIIRHPRVGEYAFGFITSTV 180

Query: 167 ILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           ILQ++NEDEELCSVFVPTNHLYIGDIFLVNSK+IIRPNLSIREGI
Sbjct: 181 ILQKENEDEELCSVFVPTNHLYIGDIFLVNSKEIIRPNLSIREGI 225


>29863.m001061 conserved hypothetical protein
          Length = 264

 Score =  269 bits (688), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 136/223 (60%), Positives = 160/223 (71%), Gaps = 15/223 (6%)

Query: 4   EKEESTSIPLSHAENGGE-EPEDPAKXXXXXXXXXTRE--------------MTGCVVLF 48
           + ++STS  LS      + +P+D  K         TR+              MTGCVVLF
Sbjct: 3   DNKDSTSSSLSQGLTRRDPDPDDIPKSPPSSPNSSTRKACYAVLQSWVSKKFMTGCVVLF 62

Query: 49  PIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXXWIGSNVFW 108
           P+AVTF +TWW IQFVDGFFSP+Y +LG+DI                     W+G+ VFW
Sbjct: 63  PVAVTFLVTWWFIQFVDGFFSPLYAKLGVDIFGLGFVTSLLFIFFVGVFASSWMGATVFW 122

Query: 109 LGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFGFITSTVIL 168
           +GEWFIKRMPF++H+YSASKQISAA+SP QNTTAFKEVAIIRHPR GEYAFGFITS+VIL
Sbjct: 123 VGEWFIKRMPFMKHIYSASKQISAAVSPDQNTTAFKEVAIIRHPRHGEYAFGFITSSVIL 182

Query: 169 QRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           QRD+ DEELCSV+VPTNHLYIGDIFLVNS++IIRPNLSIREGI
Sbjct: 183 QRDDGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGI 225


>29912.m005506 conserved hypothetical protein
          Length = 242

 Score =  257 bits (657), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 123/171 (71%), Positives = 139/171 (81%)

Query: 41  MTGCVVLFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXX 100
           MTGCV+LFPIAVTF+ITWW I FVDGFFSPIY +LGIDI                     
Sbjct: 66  MTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSMTFIFLVGVFMSS 125

Query: 101 WIGSNVFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFG 160
           W+G++V  LGEWFIKRMPFVRH+Y+ASKQISAAISP QNT AFKEVAIIRHPRIGEYAFG
Sbjct: 126 WLGASVLGLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIRHPRIGEYAFG 185

Query: 161 FITSTVILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           FITS+VILQ  + +EELC V+VPTNHLYIGDIFLVN+KD+IRP+LS+REGI
Sbjct: 186 FITSSVILQNYSGEEELCCVYVPTNHLYIGDIFLVNTKDVIRPSLSVREGI 236


>30170.m014026 conserved hypothetical protein
          Length = 267

 Score =  238 bits (608), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 112/171 (65%), Positives = 131/171 (76%)

Query: 41  MTGCVVLFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXX 100
           MTGCV+L PIAVTF+ITW  + FVDGFFSP+Y  LGI+I                     
Sbjct: 62  MTGCVILLPIAVTFYITWGFVHFVDGFFSPVYNHLGINIFGLGFATSITFIFLVGIFMSS 121

Query: 101 WIGSNVFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFG 160
           W+G++V  +GEWFIK+MP V ++YSASKQISAAISP Q T AFKEVAIIRHPR GEYAFG
Sbjct: 122 WLGTSVLTIGEWFIKKMPLVSYIYSASKQISAAISPDQTTNAFKEVAIIRHPRNGEYAFG 181

Query: 161 FITSTVILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           FITSTVILQR   +EELC V+VPTNHLY+GDIFL++ KDI+RPNLS+REGI
Sbjct: 182 FITSTVILQRSIGEEELCCVYVPTNHLYVGDIFLISMKDIMRPNLSVREGI 232