Jatropha Genome Database

JcCA0308971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308971.10 + phase: 2 /partial
         (377 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29692.m000529 phosphoglucomutase, putative                            719   0.0  
30147.m014138 phosphoglucomutase, putative                            458   e-129
32625.m000029 hypothetical protein                                    183   1e-46
32531.m000025 phosphoglucomutase, putative                            106   2e-23

>29692.m000529 phosphoglucomutase, putative
          Length = 581

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/377 (92%), Positives = 356/377 (94%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           SIFDFESI+KL+SSP FTFCYDALHGVAGAYAKRIFVEEL AQ SSLLNCVPKEDFGGGH
Sbjct: 205 SIFDFESIKKLISSPNFTFCYDALHGVAGAYAKRIFVEELCAQESSLLNCVPKEDFGGGH 264

Query: 61  PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXXX 120
           PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDS      
Sbjct: 265 PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAA 324

Query: 121 XXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 180
                 PYFSAGLKGVARSMPTSAALD+VAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG
Sbjct: 325 NAVEAIPYFSAGLKGVARSMPTSAALDIVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 384

Query: 181 EESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNGGKLVTVEDIVRNHWAFYGRHYYT 240
           EESFGTGSDHIREKDGIWAVLAWLSILA+KNKENLNGGKLV+VEDIVRNHWA YGRHYYT
Sbjct: 385 EESFGTGSDHIREKDGIWAVLAWLSILAYKNKENLNGGKLVSVEDIVRNHWATYGRHYYT 444

Query: 241 RYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGSIS 300
           RYDYENVDA AAKELMAHLV LQSSLGEVN+IVKG+RSDV+ VVH DEFEYKDPVDGSIS
Sbjct: 445 RYDYENVDAGAAKELMAHLVKLQSSLGEVNEIVKGIRSDVAKVVHGDEFEYKDPVDGSIS 504

Query: 301 SHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVALK 360
           SHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKD SKTGRDSQEALAPLV+VALK
Sbjct: 505 SHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDSSKTGRDSQEALAPLVEVALK 564

Query: 361 LSKMQEFTGRSAPTVIT 377
           LSKMQEFTGRSAPTVIT
Sbjct: 565 LSKMQEFTGRSAPTVIT 581


>30147.m014138 phosphoglucomutase, putative
          Length = 631

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/377 (59%), Positives = 281/377 (74%), Gaps = 12/377 (3%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           ++FDFE IR LLS   F F +DA+H V GAYAK IFV++LGA  +S+LN  P EDFG GH
Sbjct: 267 NVFDFELIRSLLSRSDFRFIFDAMHAVTGAYAKPIFVDKLGASPNSILNGSPLEDFGHGH 326

Query: 61  PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXXX 120
           PDPNLTYAK+LV  M  G++      P+FGAA+DGD DRNMILG+ FFVTPSDS      
Sbjct: 327 PDPNLTYAKDLVNIM-YGENG-----PDFGAASDGDGDRNMILGRGFFVTPSDSVAIIAA 380

Query: 121 XXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 180
                 PYF  G KG+ARSMPTS ALD VA+ LNL FFEVPTGWKFFGNLMDAG  S+CG
Sbjct: 381 NSQGAIPYFKNGPKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGKLSICG 440

Query: 181 EESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNGGKLVTVEDIVRNHWAFYGRHYYT 240
           EESFGTGSDHIREKDGIWAVLAWLSI+AH+N++   G KL++V DIV+ +WA YGR++++
Sbjct: 441 EESFGTGSDHIREKDGIWAVLAWLSIIAHRNRDKKPGEKLISVSDIVKEYWATYGRNFFS 500

Query: 241 RYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGSIS 300
           RYDYE   +  A +++ +L +L      ++K   G +     +  AD+F+Y DPVDGS+ 
Sbjct: 501 RYDYEECKSEGANKMIDYLRDL------ISKSKPGEKYGSYVLQFADDFKYTDPVDGSVV 554

Query: 301 SHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVALK 360
           S QG+R++F DGSR++FRLSGTGS GAT+R+YIEQ+E D SK   D+Q AL PL+D+AL 
Sbjct: 555 SKQGVRFVFTDGSRIIFRLSGTGSAGATVRMYIEQFEPDVSKHEMDAQTALKPLIDLALS 614

Query: 361 LSKMQEFTGRSAPTVIT 377
           +SK+++FTGR  PTVIT
Sbjct: 615 VSKLEDFTGREKPTVIT 631


>32625.m000029 hypothetical protein
          Length = 173

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/188 (49%), Positives = 128/188 (68%), Gaps = 16/188 (8%)

Query: 190 HIREKDGIWAVLAWLSILAHKNKENLNGGKLVTVEDIVRNHWAFYGRHYYTRYDYENVDA 249
           HIREKDG+WAVL WL+++A   K         +V +IV+ HWA +GR+YY+R+DYE VDA
Sbjct: 2   HIREKDGVWAVLFWLNLIAATGK---------SVNEIVQEHWARFGRNYYSRHDYEAVDA 52

Query: 250 SAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGSISSHQGIRYLF 309
            AA  +M  L    +SL    + +   R     V  AD+F Y DPVD S+SS QG+R + 
Sbjct: 53  GAANAMMDALRGKLASLA--GQTLGDFR-----VQLADDFTYTDPVDNSVSSRQGVRIVM 105

Query: 310 EDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVALKLSKMQEFTG 369
            DGSR+V RLSGTG+EGAT+RLY+E+YE DP++   D+Q+ALAPL+ +A ++S ++  TG
Sbjct: 106 TDGSRIVMRLSGTGTEGATVRLYLERYEADPARHDLDTQQALAPLIAIAEQVSGLKARTG 165

Query: 370 RSAPTVIT 377
           R  P+VIT
Sbjct: 166 REQPSVIT 173


>32531.m000025 phosphoglucomutase, putative
          Length = 288

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 69/105 (65%), Gaps = 7/105 (6%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
            +FDF++IR L +   F  C+D +H V+G YAK I   +LGA   +++N VP EDFGG H
Sbjct: 191 QLFDFDAIRTLFAG-GFRMCFDGMHAVSGPYAKAIIEGQLGAPAGTVINAVPLEDFGGHH 249

Query: 61  PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGK 105
           PDPN   A +L+A M      +  + P+FGAA+DGD DRNMILG+
Sbjct: 250 PDPNPVNAAQLIAIM------AADDAPDFGAASDGDGDRNMILGR 288