Jatropha Genome Database

JcCA0308861.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308861.20 - phase: 0 
         (133 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29333.m001071 dihydroneopterin aldolase, putative                     236   3e-63

>29333.m001071 dihydroneopterin aldolase, putative
          Length = 133

 Score =  236 bits (601), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 115/130 (88%), Positives = 122/130 (93%)

Query: 1   MENDEIMGGDKLILRGLKFHGFHGVKPEERTLGQKFLIDVDAWMDLREAGKTDRLSDTIS 60
           ME+DEI GGDKLIL+GLKFHGFHGVKPEERTLGQKFLIDVDAWMDLR AGK+D+LSDTIS
Sbjct: 1   MESDEIKGGDKLILKGLKFHGFHGVKPEERTLGQKFLIDVDAWMDLRAAGKSDQLSDTIS 60

Query: 61  YTEIYRIVKEVVEGAPHNLLESVAHKIASTTLTKYPQISAVRVKVGKPHVAVHGPLDYLG 120
           YTEIYRIVK VVEG P+NLLESVA  IASTTLTK+P+ISAVRVKVGKPHVAV GPLDYLG
Sbjct: 61  YTEIYRIVKAVVEGQPYNLLESVAEAIASTTLTKHPRISAVRVKVGKPHVAVQGPLDYLG 120

Query: 121 VEILRRRSID 130
           VEILRRRS D
Sbjct: 121 VEILRRRSAD 130