Jatropha Genome Database

JcCA0308831.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308831.20 + phase: 0 
         (122 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29739.m003743 Adipocyte plasma membrane-associated protein, puta...   148   6e-37
29830.m001424 Adipocyte plasma membrane-associated protein, puta...    47   2e-06

>29739.m003743 Adipocyte plasma membrane-associated protein,
           putative
          Length = 356

 Score =  148 bits (374), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 67/92 (72%), Positives = 80/92 (86%)

Query: 28  PISPDLLELPPATSLPTNKRLQEVIRLGEGTLEGPEDVCVDRDGVLYTASRDGWIKRLHS 87
           PISPDLL+LP    LP NK+LQEVI+LGEG ++GPEDVC+D+DGVLYTA RD WIKR+H 
Sbjct: 28  PISPDLLQLPAPFFLPPNKQLQEVIKLGEGFIQGPEDVCMDKDGVLYTAVRDKWIKRMHK 87

Query: 88  NGTWDNWKKIDSNGLLGITISKEGGLIVCDAE 119
           NG+W+NWK+IDS+ LLGI  SKEGGLIVCDA+
Sbjct: 88  NGSWENWKRIDSDALLGIAPSKEGGLIVCDAD 119


>29830.m001424 Adipocyte plasma membrane-associated protein,
           putative
          Length = 380

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 10/99 (10%)

Query: 28  PISPDLLELPPATSLPTNKR-LQEVIRLGEGTLEGPEDVCVD-RDGVLYTASRDGWIKRL 85
           P+    L  PPA  L  N   L+    LG+G L GPED+  D + G++YT+   GWIKR+
Sbjct: 50  PMPIHELTRPPANVLTKNAHILKGSEFLGKGELLGPEDIAFDSKSGLIYTSCAGGWIKRV 109

Query: 86  HSNGT-----WDNWKKIDSNGL-LGITISKEGGLIVCDA 118
             N +      +NW  +++ G  LG+ +     ++V DA
Sbjct: 110 TVNDSVTDSVVENW--VNTGGRPLGLALGHGNEVLVADA 146