Jatropha Genome Database

JcCA0308831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308831.10 - phase: 0 
         (151 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29739.m003744 conserved hypothetical protein                          229   4e-61
29158.m000190 conserved hypothetical protein                          160   2e-40
29739.m003638 conserved hypothetical protein                          122   8e-29
29844.m003270 conserved hypothetical protein                           92   8e-20
29794.m003398 conserved hypothetical protein                           84   2e-17
29794.m003397 conserved hypothetical protein                           76   5e-15
30146.m003521 conserved hypothetical protein                           73   5e-14

>29739.m003744 conserved hypothetical protein
          Length = 152

 Score =  229 bits (584), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 119/154 (77%), Positives = 135/154 (87%), Gaps = 5/154 (3%)

Query: 1   MAISAAETQSNPTTKPNTQLEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEA 60
           MAIS ++TQS P TKP +QLEVESV+CYSCGFTEECTPAYISRVRER++GRW+CGLCVEA
Sbjct: 1   MAISTSDTQSTPATKPLSQLEVESVRCYSCGFTEECTPAYISRVRERYHGRWICGLCVEA 60

Query: 61  VKDEVLRSDRLISTEEALNRHINFCNKFK-SSIPLHQTEHPIFVMSRILRRSLDSPR-AL 118
           VKDE++RSD  ISTEEALNRHI+FCNKF+ SS  L++TEHPI VM R+L RSLDSPR A 
Sbjct: 61  VKDEIIRSDMDISTEEALNRHISFCNKFRSSSCSLNETEHPISVMGRLLLRSLDSPRGAP 120

Query: 119 RSNSSSVLPDVDVEKI-KGSALVRSESCFSALSR 151
           RSNS+SVLPDVD  KI  GS+LVRS SCFSALSR
Sbjct: 121 RSNSTSVLPDVD--KINNGSSLVRSGSCFSALSR 152


>29158.m000190 conserved hypothetical protein
          Length = 168

 Score =  160 bits (406), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/147 (57%), Positives = 102/147 (69%), Gaps = 5/147 (3%)

Query: 6   AETQSNPTTKPNTQLEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEV 65
           A T +N       Q EVESVKC  C  TEECTPAYI RVRER++G+W+CGLC EAVKDE+
Sbjct: 24  ATTATNMLISTAAQTEVESVKCECCVLTEECTPAYIERVRERYHGKWICGLCAEAVKDEI 83

Query: 66  LRS-DRLISTEEALNRHINFCNKFKSS-IPLHQTEHPIFVMSRILRRSLDSPRALRSNSS 123
           +RS +RLISTEEA+ RH++FC KF SS  P   T H I  M +ILR+SLDSPR LRS  +
Sbjct: 84  VRSTERLISTEEAMARHMSFCKKFVSSGPPPDPTVHLISAMRQILRKSLDSPRGLRSTPT 143

Query: 124 SVLPDVDVEKIKGSALVRSESCFSALS 150
           S     +  KI+ + L RSESCF  LS
Sbjct: 144 S---PTNYGKIRAAGLTRSESCFPTLS 167


>29739.m003638 conserved hypothetical protein
          Length = 138

 Score =  122 bits (305), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 16  PNTQLEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLISTE 75
           P   LE+E+ KC  CGFTEECT +YI+RVRER  GRW+CGLC EAVKDE  R  + IS  
Sbjct: 14  PAAGLEIENTKCECCGFTEECTASYIARVRERCGGRWICGLCEEAVKDESYRLSKAISVS 73

Query: 76  EALNRHINFCNKFKSSI-PLHQTEHPIFVMSRILRRSLDSPR 116
           EAL  H+ FC +FKSSI P++ T   I  +  ++RRSLDSPR
Sbjct: 74  EALELHMKFCQQFKSSIPPINPTGKLISAVKLLIRRSLDSPR 115


>29844.m003270 conserved hypothetical protein
          Length = 115

 Score = 92.0 bits (227), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 50/69 (72%)

Query: 20 LEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLISTEEALN 79
          +E+ESVKC  CG  E+CT  YIS V+ +F+G+WLCGLC EAV+DEV R  +    EEA+ 
Sbjct: 1  MEIESVKCECCGLKEDCTQDYISEVKAKFDGKWLCGLCSEAVRDEVSRGKKQFGMEEAVR 60

Query: 80 RHINFCNKF 88
           H++FC KF
Sbjct: 61 AHMSFCGKF 69


>29794.m003398 conserved hypothetical protein
          Length = 193

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 81/153 (52%), Gaps = 20/153 (13%)

Query: 6   AETQSNPTTKPNTQLEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEV 65
           A T S+    P T  EVE  KC  CG +EECT  YI RVR++F G+++CGLC EAV+ E+
Sbjct: 46  AATDSSSILPPIT--EVEDGKCECCGMSEECTSEYIKRVRDKFLGKFVCGLCAEAVQQEM 103

Query: 66  LRSDRLISTEEALNRHINFCNKFKSSIPLHQTEHPIFVMSRILRRSLD-------SPRAL 118
            ++      E+ALN H++ C +F     ++   +    M  IL++S         SPR  
Sbjct: 104 AKNGG--KKEDALNEHVSACVQFNKVCRVNPVLYQAEAMREILKKSASINRAKSISPRDR 161

Query: 119 RSNSSSVLPDVDVEKIKGSALVRSESCFSALSR 151
            S SS+        + KG  + RS SC  AL+R
Sbjct: 162 GSASST--------QRKG-GIARSSSCIPALTR 185


>29794.m003397 conserved hypothetical protein
          Length = 148

 Score = 76.3 bits (186), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 7/121 (5%)

Query: 18  TQLEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLISTEEA 77
           T  EV   +C  CG  EECT  YIS V+   +G W+CGLC EAVK+  L     ++ +EA
Sbjct: 30  TSDEVNQAECECCGLKEECTQDYISAVKFSHSGNWVCGLCSEAVKELTLERSSRLNMQEA 89

Query: 78  LNRHINFCNKFKSSIPLHQTEHPIFVMSRILRRSLD-----SPRALRSNSSSVLPDVDVE 132
           ++ H  FC +F ++  L+      + M  I +RS +     +P+  R  S+S +P +D++
Sbjct: 90  VSCHKGFCQEFNNTTRLNPKLSLTYAMRGIAKRSCEKRNSKTPKLAR--STSCVPRIDLK 147

Query: 133 K 133
           +
Sbjct: 148 Q 148


>30146.m003521 conserved hypothetical protein
          Length = 187

 Score = 72.8 bits (177), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 73/136 (53%), Gaps = 21/136 (15%)

Query: 21  EVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLISTEEALNR 80
           EVE  KC  CG  EECTP YI R+R +F G+W+CGLC EAVK+E +  D     E+ALN 
Sbjct: 59  EVEDAKCECCGMCEECTPEYIDRIRNKFLGKWICGLCAEAVKEE-MEKDGGKKIEDALNA 117

Query: 81  HINFC---NKFKSSIP-LHQTEHPIFVMSRILRRSLD-SPRALRSNSSSVLPDVDVEKIK 135
           H++ C   NKF  + P L Q E    ++ +  RR+   SP+  + N              
Sbjct: 118 HMSACARFNKFGRAYPVLFQAEAMREMLKKNTRRTKSFSPKGAQKN-------------- 163

Query: 136 GSALVRSESCFSALSR 151
              + RS SC +A++R
Sbjct: 164 -GGIARSSSCIAAITR 178