Jatropha Genome Database

JcCA0308681.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308681.30 + phase: 2 /partial
         (340 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006117 pyridoxamine 5-phosphate oxidase, putative              569   e-163

>29908.m006117 pyridoxamine 5-phosphate oxidase, putative
          Length = 546

 Score =  569 bits (1467), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 273/316 (86%), Positives = 296/316 (93%), Gaps = 3/316 (0%)

Query: 26  SSEPTREMQ-SIQNPESISYLRQREAAEIDEMLMGPLGFSVDQLMELAGLSVATSIEEVY 84
           SS  TR+MQ SIQ PESISYL Q +AAEIDE+LMGPLGFSVDQLMELAGLSVATSI EVY
Sbjct: 74  SSGVTRDMQQSIQTPESISYLTQHDAAEIDEILMGPLGFSVDQLMELAGLSVATSIAEVY 133

Query: 85  KPSEYNRVLAICGPGNNGGDGLVAARHLHHFGYKPVICYPKRTAKQLYTGLVTQLESLSV 144
           KPSE+NRVLAICGPGNNGGDGLVAA HL+HFGYKP +CYPKRT+K LY GLVTQLESLSV
Sbjct: 134 KPSEFNRVLAICGPGNNGGDGLVAAHHLYHFGYKPFVCYPKRTSKSLYNGLVTQLESLSV 193

Query: 145 PFLAVEDLPLDLSKDFDILVDAMFGFSFHGAPRPPFDDLIQKLVYLHKCNEVHEKRSVVV 204
           PFLAVEDLP DLSKDFDIL+DAMFGFSFHGAPRPPFDDLI K+V+L+KCN+   ++SV+V
Sbjct: 194 PFLAVEDLPSDLSKDFDILLDAMFGFSFHGAPRPPFDDLIHKMVHLNKCNQT--RKSVIV 251

Query: 205 SIDIPSGWHVEEGDVGGEGIKPDMLVSLTAPKLCAKKFSGPHHFLGGRFIPPIIVEKFKL 264
           S+DIPSGWHVEEGDV GEG+KPDMLVSLTAPKLCA+KFSGPHHFLGGRF+PP IVEK+KL
Sbjct: 252 SVDIPSGWHVEEGDVDGEGMKPDMLVSLTAPKLCARKFSGPHHFLGGRFVPPSIVEKYKL 311

Query: 265 HLPPYPGTSMCVRIGKPPQIDMSALRENYISPEFLEEQVEANPIDQFRKWFDDAVVAGLK 324
           HLPPYPGTSMCVRIGKPPQID+SALRENYISPEFLEEQVEANP+DQF+KWFDDAV AGLK
Sbjct: 312 HLPPYPGTSMCVRIGKPPQIDISALRENYISPEFLEEQVEANPVDQFKKWFDDAVAAGLK 371

Query: 325 EPNAMCLSTVGKDGKP 340
           EPNAM LSTVGKDGKP
Sbjct: 372 EPNAMALSTVGKDGKP 387