Jatropha Genome Database

JcCA0308421.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308421.20 + phase: 0 /partial
         (210 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29739.m003668 aminoadipic semialdehyde synthase, putative             342   6e-95
29739.m003672 aminoadipic semialdehyde synthase, putative             204   3e-53

>29739.m003668 aminoadipic semialdehyde synthase, putative
          Length = 1050

 Score =  342 bits (878), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 167/210 (79%), Positives = 178/210 (84%), Gaps = 3/210 (1%)

Query: 1   QLQDLTRKGCPLVGIADITCDVGGSIEFINETTSIDCPFFRYEPLNDSYHHDMDGNGLIC 60
           QLQDL RKGCPLVGIADITCD+ GSIEFIN+TTSID PFFRY+PL DSYH DM+GNG+IC
Sbjct: 323 QLQDLMRKGCPLVGIADITCDIEGSIEFINQTTSIDYPFFRYDPLKDSYHQDMEGNGIIC 382

Query: 61  SSVDILPTEFAKEASQHFGDILSQFIGSLVSTTDITKLPSHLRRACIAHGGAPTPMFEYI 120
           SSVDILPTEFAKEASQHFGDILSQFIGSL STTD  KLPSHLRRACIAHGG   P+FEYI
Sbjct: 383 SSVDILPTEFAKEASQHFGDILSQFIGSLASTTDTNKLPSHLRRACIAHGGEIAPLFEYI 442

Query: 121 PRMRNSESEDMRENPVXXXXXXXXXXXXXXXXGHLFDQFLINEALDIIEAAGGSFHLVKC 180
           PRMRNS+SEDM EN                  GHLFD+FLINEALDIIEAAGG+FHLVKC
Sbjct: 443 PRMRNSDSEDMPEN---LNSSKKKFNILVSLSGHLFDKFLINEALDIIEAAGGAFHLVKC 499

Query: 181 HVGQSANTPSYSELEVGADDREVLDQIIDS 210
           HVGQSA+  SYSELEVGADDREVLDQI+DS
Sbjct: 500 HVGQSADATSYSELEVGADDREVLDQILDS 529


>29739.m003672 aminoadipic semialdehyde synthase, putative
          Length = 448

 Score =  204 bits (518), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 92/128 (71%), Positives = 109/128 (85%)

Query: 1   QLQDLTRKGCPLVGIADITCDVGGSIEFINETTSIDCPFFRYEPLNDSYHHDMDGNGLIC 60
           QL+DL  KGCPL  I D+TCD+ GSIE +N+TT+ID PFFRY+PLNDSYHHD++G+GLIC
Sbjct: 320 QLRDLASKGCPLTAITDLTCDMEGSIEILNQTTTIDTPFFRYDPLNDSYHHDIEGSGLIC 379

Query: 61  SSVDILPTEFAKEASQHFGDILSQFIGSLVSTTDITKLPSHLRRACIAHGGAPTPMFEYI 120
           S VD LPTEF KEA QHFG +LSQFIG+L ST DI KLP+HLRRACIAH GA TP+FEYI
Sbjct: 380 SVVDNLPTEFPKEACQHFGALLSQFIGTLASTADIAKLPAHLRRACIAHEGALTPLFEYI 439

Query: 121 PRMRNSES 128
            +MRN++S
Sbjct: 440 KQMRNTDS 447