Jatropha Genome Database

JcCA0307901.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0307901.20 + phase: 0 
         (202 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30150.m000477 DAG protein, chloroplast precursor, putative            164   3e-41
29726.m004092 DAG protein, chloroplast precursor, putative            127   3e-30
29842.m003703 DAG protein, chloroplast precursor, putative            112   9e-26
27561.m000300 DAG protein, chloroplast precursor, putative            102   1e-22
28725.m000312 conserved hypothetical protein                           71   3e-13
29930.m000611 RNA binding protein, putative                            68   3e-12

>30150.m000477 DAG protein, chloroplast precursor, putative
          Length = 484

 Score =  164 bits (414), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 89/115 (77%)

Query: 61  ILEDCDYKHWLVVMEAPKEYPLRDEIINRYVKTLAMALGSEEKAKESIYSVSTKYYYAFG 120
           +L+ CD+ HWLVVME P+  P RDEII+ Y+KTLA  +GSEE+A+  IYSVST+ YYAFG
Sbjct: 89  LLDGCDFNHWLVVMEKPEGDPTRDEIIDSYIKTLAQVVGSEEEARMKIYSVSTRCYYAFG 148

Query: 121 CNVSENLTYKIKSLPDVKWVLPDSYLCCGESSYGGEPFFDGEVVPYDDKYHEDWV 175
             VSE L+YKIK LP V+WVLPDSYL      YGGEPF DG+ VPYD KYHE+W+
Sbjct: 149 ALVSEELSYKIKELPRVRWVLPDSYLDVKNKDYGGEPFIDGKAVPYDPKYHEEWI 203


>29726.m004092 DAG protein, chloroplast precursor, putative
          Length = 262

 Score =  127 bits (320), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/105 (58%), Positives = 76/105 (72%), Gaps = 1/105 (0%)

Query: 61  ILEDCDYKHWLVVMEAPKE-YPLRDEIINRYVKTLAMALGSEEKAKESIYSVSTKYYYAF 119
           +L+ CDY+HWL+VME P +  P  +E+IN YVKTLA  LGSEE+AK+ IYSVST  Y  F
Sbjct: 81  LLDGCDYEHWLIVMEFPNDPKPSEEEMINAYVKTLASVLGSEEEAKKKIYSVSTTTYTGF 140

Query: 120 GCNVSENLTYKIKSLPDVKWVLPDSYLCCGESSYGGEPFFDGEVV 164
           G  +SE L+YK+K LP V WVLPDSYL      YGG+ F DG+V+
Sbjct: 141 GALISEELSYKLKGLPGVLWVLPDSYLDVPNKDYGGDLFVDGKVI 185


>29842.m003703 DAG protein, chloroplast precursor, putative
          Length = 226

 Score =  112 bits (281), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 1/106 (0%)

Query: 61  ILEDCDYKHWLVVMEAPKE-YPLRDEIINRYVKTLAMALGSEEKAKESIYSVSTKYYYAF 119
           +L  CDY HWL+VME PK+  P R+++I+ Y+ TLA  LGS E+AK+++Y+ ST  Y  F
Sbjct: 74  MLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGF 133

Query: 120 GCNVSENLTYKIKSLPDVKWVLPDSYLCCGESSYGGEPFFDGEVVP 165
            C V E  + K K LP V WVLPDSY+      YGG+ + +GE++P
Sbjct: 134 QCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIP 179


>27561.m000300 DAG protein, chloroplast precursor, putative
          Length = 248

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 71/105 (67%), Gaps = 1/105 (0%)

Query: 61  ILEDCDYKHWLVVMEAPK-EYPLRDEIINRYVKTLAMALGSEEKAKESIYSVSTKYYYAF 119
           +   CDY+HWL+VM+ P  E   + ++I+ Y++TLA  +GSEE+AK+ IY+VS + Y+ F
Sbjct: 107 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGF 166

Query: 120 GCNVSENLTYKIKSLPDVKWVLPDSYLCCGESSYGGEPFFDGEVV 164
           GC + E  + K++ LP V +VLPDSY+      YG E F +GE+V
Sbjct: 167 GCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIV 211


>28725.m000312 conserved hypothetical protein
          Length = 394

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 2/114 (1%)

Query: 54  ELTRLPSILEDCDYKHWLVVMEAPKE-YPLRDEIINRYVKTLAMALGSE-EKAKESIYSV 111
           E+T    + E CD+ HWL+ ++ PK+  P  +E++  Y +  A  L    E+AK+ IY+ 
Sbjct: 79  EITEDMVLFEGCDFNHWLITVDFPKDPAPTPEEMVATYERICAEGLKIRIEEAKKKIYAC 138

Query: 112 STKYYYAFGCNVSENLTYKIKSLPDVKWVLPDSYLCCGESSYGGEPFFDGEVVP 165
           ST  Y  F   ++E  + + K +P V +VLPDSY+      YGG+ + +G + P
Sbjct: 139 STTTYQGFQAVMTEEESERFKDVPGVVFVLPDSYIDPQNKQYGGDLYENGVITP 192


>29930.m000611 RNA binding protein, putative
          Length = 371

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%)

Query: 66  DYKHWLVVMEAPKE-YPLRDEIINRYVKTLAMALGSEEKAKESIYSVSTKYYYAFGCNVS 124
           D +HW+V+ME+P +    + EII+ YVKTLA  LGSE+ A+  IY  S   ++ F C++ 
Sbjct: 83  DNRHWMVLMESPSQGVNSKPEIIDYYVKTLARVLGSEKDAELCIYDASCDTHFGFCCDID 142

Query: 125 ENLTYKIKSLPDVKWVLPD 143
           E  + ++ SLP V  V PD
Sbjct: 143 ETTSLELASLPGVLSVRPD 161