Jatropha Genome Database

JcCA0307801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0307801.10 + phase: 0 
         (510 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002290 histidyl-tRNA synthetase, putative                      768   0.0  
29757.m000724 histidyl-tRNA synthetase, putative                      115   4e-26
60536.m000014 histidyl-tRNA synthetase, putative                       63   4e-10

>30078.m002290 histidyl-tRNA synthetase, putative
          Length = 503

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/512 (77%), Positives = 417/512 (81%), Gaps = 11/512 (2%)

Query: 1   MPPILSSLHAVHPLISRLYAKPLFLSFTNLSHSSLSLREFSLPRQSFPVKVRTLSSIASA 60
           MPPI SSLH    +   L+ KP+FLSFT  SHSSLS R+  LP   +P   RTLSSIAS+
Sbjct: 1   MPPITSSLH----IRFSLHIKPIFLSFTRFSHSSLSPRK--LPLSIYP---RTLSSIASS 51

Query: 61  AQXXXXXXXXXXXXXXXXXXXX--VLEEAVQKIDVNPPKGTRDFPPEEMRLRNWLFHNFR 118
                                   VLEE ++KIDVNPPKGTRDFPPEEMRLRNWLF+NFR
Sbjct: 52  YSPIDNVTCGAGGGRSGGLTSPPPVLEEPIEKIDVNPPKGTRDFPPEEMRLRNWLFNNFR 111

Query: 119 EVSRLYGFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVI 178
           EVS+LYGFEEVDFPVLE+EALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVI
Sbjct: 112 EVSKLYGFEEVDFPVLETEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVI 171

Query: 179 QKGKSVPLPLKWFAVGQCWXXXXXXXXXXXEHYQWNMDIIGVPEVTAEAELISSIVTFFK 238
           QKGKSVPLPLKWFAVGQCW           EHYQWNMDIIGVP VTAEAELISSIVTFFK
Sbjct: 172 QKGKSVPLPLKWFAVGQCWRYERMTRGRRREHYQWNMDIIGVPGVTAEAELISSIVTFFK 231

Query: 239 RIGITASDVGFKVSSRKVLQEVLKCYSISENLFGKVCXXXXXXXXXXXXXXXXXLKSVGM 298
           RIGITASDVGFKVSSRKVLQEVL+CYSIS+NLFGKVC                 LKSVGM
Sbjct: 232 RIGITASDVGFKVSSRKVLQEVLRCYSISDNLFGKVCIIIDKIEKIPVAEIKKELKSVGM 291

Query: 299 SEEAVEELLQVLSIKSLTKLEEILGGAGEAVADLKQLFSLAENFGYSEWIQFDASVVRGL 358
           SEEAVEELLQVLSIKSLTKLEEILGGAGEA+ DLKQLFSLAE FGYSEWIQFDASVVRGL
Sbjct: 292 SEEAVEELLQVLSIKSLTKLEEILGGAGEAIGDLKQLFSLAEKFGYSEWIQFDASVVRGL 351

Query: 359 AYYTGIVFEGFDREGKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIVXXXXXXXXX 418
           AYYTGIVFEGFDREGKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIV         
Sbjct: 352 AYYTGIVFEGFDREGKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIVELLKEKGLL 411

Query: 419 XXXXXQVENIVCALDPDLQGAASTVATILREKGQTVDLVLENKPLKWVFKRAGRINAQRL 478
                QVENIVCALD DLQGAA+ VATILREKGQ VDLVLE+KPLKWVFKRA RINAQ+L
Sbjct: 412 PELGLQVENIVCALDSDLQGAAARVATILREKGQNVDLVLEDKPLKWVFKRAARINAQKL 471

Query: 479 ILVGNTEWQKGMVGVKILSSGEQYEVKLDELE 510
           +LVG TEWQKGMVGVKILS+GEQYEVKLDEL+
Sbjct: 472 VLVGKTEWQKGMVGVKILSTGEQYEVKLDELQ 503


>29757.m000724 histidyl-tRNA synthetase, putative
          Length = 886

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 182/424 (42%), Gaps = 22/424 (5%)

Query: 96  PKGTRDFPPEEMRLRNWLFHNFREVSRLYGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 155
           PKGTRDF  E+M +R   F    EV + +G   +D P  E     + K GE+ +  +Y  
Sbjct: 451 PKGTRDFAKEQMAIRERAFSIITEVFKRHGATALDTPAFELRETLMGKYGEDSK-LIYDL 509

Query: 156 EDRGNRRVALRPELTPSLARLVIQKGKSVPLPLKWFAVGQCWXXXXXXXXXXXEHYQWNM 215
            D+G    +LR +LT   AR V   G +     K + + + +           E YQ + 
Sbjct: 510 ADQGGELCSLRYDLTVPFARYVAMNGIT---SFKRYQIAKVYRRDNPSKGRYREFYQCDF 566

Query: 216 DIIG-VPEVTAEAELISSIVTFFKRIGITASDVGFKVSSRKVLQEVLKCYSISENLFGKV 274
           DI G   E+  + E++  +      + I    V  K++ RK+L  +L+   +    F  +
Sbjct: 567 DIAGQYEEMGPDFEIVKILTELLDELNIGEYKV--KLNHRKLLDGMLEICGVPPEKFRTI 624

Query: 275 CXXXXXXXXXXXXXXXXXL-KSVGMSEEAVEELLQVLSIKS-----LTKLE----EILGG 324
           C                 + +  G+S E  +++   +         L+KL+    E LG 
Sbjct: 625 CSSVDKLDKQSFSQVKKEMVEEKGLSVETADKIGTFVKESGHPKELLSKLKQEGSEFLGN 684

Query: 325 AGE--AVADLKQLFSLAENFGYSEWIQFDASVVRGLAYYTGIVFEG-FDREGKLRAICGG 381
           A    A+ +L+ LF   E     + + FD S+ RGL YYTG++FE  F  + ++ +I  G
Sbjct: 685 ASSRRALDELEILFDALEKSKCIDKVAFDLSLARGLDYYTGVIFEAVFKGKTQVGSIAAG 744

Query: 382 GRYDRLLSTFGGDDLPACGFGFGDAVIVXXXXXXXXXXXXXXQVENIVCAL-DPDLQGAA 440
           GRYD L+  FG   +PA G   G   +               + + ++  L D      A
Sbjct: 745 GRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEEDQNQTSRPTETQVLLSILGDKSKLPLA 804

Query: 441 STVATILREKGQTVDLVLENKPLKWVFKRAGRINAQRLILVGNTEWQKGMVGVKILSSGE 500
           + +A  L       +  +  +  K +  RA       ++LVG+ E +KG+V +K L +  
Sbjct: 805 AELAGELWNAKLKAEYTVSTRFSKHI-DRAKESKIPIMVLVGDKELEKGIVKIKNLETTV 863

Query: 501 QYEV 504
           + EV
Sbjct: 864 EKEV 867


>60536.m000014 histidyl-tRNA synthetase, putative
          Length = 194

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 4/158 (2%)

Query: 354 VVRGLAYYTGIVFEGFDRE-GKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIVXXX 412
           +VRGL YY   VFE    + G    I GGGRYD L+   GG   PACGFG G   +    
Sbjct: 32  LVRGLDYYNRTVFEWVTTKLGAQGTIAGGGRYDTLVERIGGSATPACGFGIGLERVF--L 89

Query: 413 XXXXXXXXXXXQVENIVCALDPDLQGAASTVATILREKGQTVDLVLENKPLKWVFKRAGR 472
                      Q +  +  +    +  A TVA  LR  G  V L       K   K+A R
Sbjct: 90  LMQEYGVTAANQADIYLVNVGDLAEQKAFTVAESLRSMGLNVVLHAGGGSFKSQMKKADR 149

Query: 473 INAQRLILVGNTEWQKGMVGVK-ILSSGEQYEVKLDEL 509
             A+   ++G+ E     + +K +L  GEQ  V LD++
Sbjct: 150 SGARFAAILGDDEAAANELSLKPMLGQGEQARVSLDQV 187