Jatropha Genome Database

JcCA0306791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306791.10 - phase: 0 /pseudo
         (602 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29816.m000677 Auxin efflux carrier component, putative                521   e-148
30180.m001064 Auxin efflux carrier component, putative                520   e-148
29662.m000472 Auxin efflux carrier component, putative                472   e-133
27985.m000882 Auxin efflux carrier component, putative                319   2e-87
30128.m009025 conserved hypothetical protein                          184   1e-46
29804.m001502 hypothetical protein                                    127   1e-29
29822.m003474 conserved hypothetical protein                          113   3e-25

>29816.m000677 Auxin efflux carrier component, putative
          Length = 646

 Score =  521 bits (1343), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/476 (57%), Positives = 338/476 (71%), Gaps = 28/476 (5%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MIT  D Y V+TA+VPLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1   MITGKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           +N+PY MN RFIAADTLQKII+LV L LWT L+K G LEW IT+FSLSTLPNTLVMGIPL
Sbjct: 61  TNNPYEMNLRFIAADTLQKIIMLVALGLWTNLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFPDTAGSIVSIHVDSD 180
           L  MY +++GSLMVQ+VVLQCIIWYTL+LF+FEYRGAKMLI EQFP+TA SIVS  VDSD
Sbjct: 121 LIAMYDKYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180

Query: 181 IMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIY 240
           ++SLDGR  LET+AEI  DGKLHVTVRKSNASR  +      GL   TPRPSNLT AEIY
Sbjct: 181 VVSLDGRDFLETDAEIGNDGKLHVTVRKSNASRRSLGPGSFSGL---TPRPSNLTGAEIY 237

Query: 241 SLQSSRNPTPRGSSFNHTDFYSMMAA-----GRNSNFGASDVYGLSASRGPTPRPSNYEE 295
           SL SSRNPTPRGS+FN +DFY+MM       GR SNFG +D+Y + +SRGPTPRPSN+EE
Sbjct: 238 SLSSSRNPTPRGSNFNTSDFYNMMGVQGFPGGRLSNFGPADLYSVQSSRGPTPRPSNFEE 297

Query: 296 DGGGLG--NKPRFHYHAAAGAGIATHYPAPNPGMFSPTGSK---GVTANNVGVKKPNGQA 350
           +   +   + PRF ++ A    + T YPAPNP   S   +K            ++   Q 
Sbjct: 298 NCAPMATISSPRFGFYPA--QTVPTSYPAPNPEFSSTKNTKNQQQQEQQQPLQQQQQQQN 355

Query: 351 QHKSEDGGGRDLHMFVWSSSASPVSDVFGGHDYGSHDQ--------KDVRLAVSPGKVPV 402
           Q+   +   ++LHMFVWSSSASPVSDVFGG+D+G+  Q        K++R+ V+    P 
Sbjct: 356 QNNKTNHDAKELHMFVWSSSASPVSDVFGGNDFGAAQQSGRSDQGAKEIRMLVA--DHPQ 413

Query: 403 EGQRENHHHQEEYMEREDFSFGNRGVEREMNNHHQGEKVIDDGKPKTNASNKCHDK 458
            G+ +   H  ++   EDFSF  +G   +      G   ++  K  ++++ + H K
Sbjct: 414 NGETKAIAHAGDF-PGEDFSFAGKGDGEDDEREKDGPTGLN--KLGSSSTAELHPK 466


>30180.m001064 Auxin efflux carrier component, putative
          Length = 613

 Score =  520 bits (1339), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 296/482 (61%), Positives = 345/482 (71%), Gaps = 89/482 (18%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MI+ TD YHV+TA+VPLYVAMILAYGSVKWWKIF+PDQCSGINRFVALFAVPLLSFHFIS
Sbjct: 1   MISATDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           +N+PY+MN+RFIAADTLQK+IVL VLA+W++ S RG LEW+ITLFSLSTLPNTLVMGIPL
Sbjct: 61  TNNPYAMNYRFIAADTLQKVIVLFVLAIWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFPDTAGSIVSIHVDSD 180
           LKGMYG+ SGSLMVQIVVLQCIIWYTLMLF+FEYRGA++LI EQFPDTAGSI+S  VDSD
Sbjct: 121 LKGMYGDDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLIGEQFPDTAGSIISFRVDSD 180

Query: 181 IMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLS---STTPRPSNLTNA 237
           I+SLDGR+PL+TEAE+ EDGKLHVTVRKS +SRS+IFSRRS G +   S TPRPSNLTN 
Sbjct: 181 IISLDGREPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGLSLTPRPSNLTNV 240

Query: 238 EIYSLQSSRNPTPRGSSFNHTDFYSMMAAGRNSNFGASDVYGLSASRGPTPRPSN----- 292
           EIYSLQSSRNPTPRGSSFNHTDFYSM+  G+N    AS+V         +PR SN     
Sbjct: 241 EIYSLQSSRNPTPRGSSFNHTDFYSMV-NGKN----ASNV---------SPRQSNFGNLP 286

Query: 293 YEEDGGGL---GNKPRFHYHAAAGAGIATHYPA-PNPGMFSPTGSKGVTANNVGVKKPNG 348
           ++E+ GG+   GN  R +  A         YPA PN G+FSP G+K         KK NG
Sbjct: 287 FDEENGGIGVFGNVSRTNGSA---------YPAPPNAGIFSP-GAK---------KKANG 327

Query: 349 QAQHKSEDGGGRDLHMFVWSSSASPVSD----VFGGHDYGSHDQKDVRLAVSPGKVPVEG 404
                     G+DLHMFVWSSSASPVS+    VF G D+G          +  G V    
Sbjct: 328 AEN-------GKDLHMFVWSSSASPVSEGGIHVFRGGDHG----------IDLGGV---- 366

Query: 405 QRENHHHQEEYME--REDFSFGNR----GVERE------MNNHHQGE---KVIDDGKPKT 449
                H + +Y E  R++FSFGNR    GV+RE      + +    E   K   DG+P+ 
Sbjct: 367 ----AHQKVDYDEFGRDEFSFGNRPVPNGVDREGPVLSKLGSSSTAELHPKTGVDGEPRA 422

Query: 450 NA 451
            A
Sbjct: 423 TA 424


>29662.m000472 Auxin efflux carrier component, putative
          Length = 635

 Score =  472 bits (1214), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/391 (62%), Positives = 286/391 (73%), Gaps = 27/391 (6%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MIT  D Y V+ A+VPLYVAMILAYGSV+WWKIFTPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1   MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           SNDPY+MN+RFIAAD+LQK+++L  L LW   SK G LEW ITLFSLSTLPNTLVMGIPL
Sbjct: 61  SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKSGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFPDTAGSIVSIHVDSD 180
           LK MYGEFSGSLMVQIVVLQ +IWYTLMLFMFEYRGAK+LISEQFP+TAGSI S  VDSD
Sbjct: 121 LKAMYGEFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISEQFPETAGSITSFRVDSD 180

Query: 181 IMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGL---SSTTPRPSNLTNA 237
           ++SL+GR+PL+ +AEI +DGKLHV V++S AS       +SQGL   +S TPR SNLT  
Sbjct: 181 VVSLNGREPLQADAEIGDDGKLHVVVKRSTASSMVSSFNKSQGLNSITSMTPRASNLTGV 240

Query: 238 EIYSLQSSRNPTPRGSSFNHTDFYSMMAA-------GRNSNF---GASDVYGLSASRGPT 287
           EIYS+QSSR PTPR SSFN TDFY+M A+       G  ++F   G  DVY L +S+G T
Sbjct: 241 EIYSVQSSREPTPRASSFNQTDFYAMFASKAASPKHGYTNSFQGSGIGDVYSLQSSKGAT 300

Query: 288 PRPSNYEEDGGGL--GNKPRFHYHAAAGAGIATHYPAPNPGMFSPTGSKGVTANNVGVKK 345
           PR SN++E+       N  +     +    +   YP PNP MFS + S G+     G   
Sbjct: 301 PRTSNFDEEMMLKINNNNGKKRGGRSMSGELFNGYPPPNP-MFSGSTSGGMRKKESGGTM 359

Query: 346 PNGQAQHKSEDGGGRDLHMFVWSSSASPVSD 376
           PN            ++LHMFVWSSSASPVS+
Sbjct: 360 PN-----------NKELHMFVWSSSASPVSE 379


>27985.m000882 Auxin efflux carrier component, putative
          Length = 544

 Score =  319 bits (818), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 185/402 (46%), Positives = 236/402 (58%), Gaps = 52/402 (12%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MIT  DFY VM AMVPLY AM++AYGSVKW K+FTP+QCSGINRFVA+FAVP+LSFHFIS
Sbjct: 1   MITADDFYKVMCAMVPLYFAMLVAYGSVKW-KVFTPEQCSGINRFVAVFAVPVLSFHFIS 59

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
            N+PY M+ +FI ADTL K++VL VL++W  +   G L+W ITLFS++TLPNTLVMGIPL
Sbjct: 60  KNNPYQMDTKFILADTLSKVLVLAVLSVWA-IFFNGGLDWLITLFSVATLPNTLVMGIPL 118

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFP-DTAGSIVSIHVDS 179
           L  MYG+F+ SLMVQ+VVLQCIIWYTL+LF+FEYR A +LI  QFP  TA SI  I +D+
Sbjct: 119 LMAMYGDFTQSLMVQVVVLQCIIWYTLLLFLFEYRAATLLIKTQFPGPTAASITKIELDT 178

Query: 180 DIMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEI 239
           D++SLDGR PL TE+E   +G++ V +R+S +S  D  S  S    + TPRPSNL+NAEI
Sbjct: 179 DVISLDGRDPLRTESETDGNGRIRVRIRRSTSSAPD--SALSISSINLTPRPSNLSNAEI 236

Query: 240 YSLQSSRNPTPRGSSFNHTDF----------------------------YSMMAAGRNSN 271
           +S+ +   P P      H                               Y    + R S 
Sbjct: 237 FSVNT---PAPFHDYNIHNPNNIYNLYNNNHGGTNNNEIIICNGDLGFGYRSGTSPRLSG 293

Query: 272 FGASDVYGLSASRGPTPRPSNYEE-DGGGLGNKPRFHYHAAAGAGIATHYPA-------- 322
           + +SD Y L     PTPR SN+ E D     + P +     AG       PA        
Sbjct: 294 YASSDAYSLQ----PTPRASNFNEMDVINAASTPYWVRSPVAGKFFRQPSPAVPDVRMLW 349

Query: 323 ---PNPGMFSPTGSKGVTANNVGVKKPNGQAQHKSEDGGGRD 361
              P  G     GSK +T   +  +  +       E+   +D
Sbjct: 350 GESPGKGQNGGAGSKDITEKEISFRDSSKTPAADEEETIAKD 391


>30128.m009025 conserved hypothetical protein
          Length = 357

 Score =  184 bits (466), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 85/163 (52%), Positives = 115/163 (70%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MI   D Y V+ AMVPLYVA++L YGS++WWKIFTP+Q   +NR V  F +PL +F F +
Sbjct: 1   MIGWEDVYKVIVAMVPLYVALLLGYGSIRWWKIFTPEQGGAVNRLVCYFTLPLFTFEFTA 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
             DP+ MN+ FI AD + K I++VVLA W K S +G   W+IT FSLSTL N+LV+G+PL
Sbjct: 61  HVDPFKMNYLFIGADAISKFIIVVVLACWAKFSSKGSYTWSITSFSLSTLTNSLVVGVPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISE 163
           +K MYG  +  L+VQ  V+Q IIW T++LF+ E+R  ++ IS 
Sbjct: 121 MKAMYGPMAVDLVVQSSVVQAIIWLTILLFVLEFRRTRLDISS 163


>29804.m001502 hypothetical protein
          Length = 148

 Score =  127 bits (319), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 73/137 (53%), Positives = 85/137 (62%), Gaps = 22/137 (16%)

Query: 116 MGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFPDTAGSIVSI 175
           MGIPLL  MY ++  SLMVQ                  YRGAKMLI EQFP+TA SIV  
Sbjct: 1   MGIPLLIVMYDKYVDSLMVQ------------------YRGAKMLIMEQFPETAASIVLF 42

Query: 176 HVDSDIMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLT 235
            +DSD++SLDGR  LET+A+I  DGKLHV VRKS AS+  +      GL+     PSNLT
Sbjct: 43  KMDSDVVSLDGRDLLETDAKIGSDGKLHVAVRKSKASKRSLGHGSFFGLT----HPSNLT 98

Query: 236 NAEIYSLQSSRNPTPRG 252
            AEIY L SS+NPT R 
Sbjct: 99  GAEIYCLSSSQNPTLRA 115


>29822.m003474 conserved hypothetical protein
          Length = 313

 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 75/101 (74%), Gaps = 1/101 (0%)

Query: 45  FVALFAVPLLSFHFISSNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITL 104
           FVA F++PLLSF  IS+N+PY MN + I AD LQK++  +VL   TK+S RG L W IT 
Sbjct: 2   FVAKFSIPLLSFQVISNNNPYKMNLKLIFADFLQKLLAALVLLAITKISSRGRLNWIITG 61

Query: 105 FSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWY 145
            SLSTLPNTL++GIPLLK MYG  + +L  QIVVLQ ++WY
Sbjct: 62  LSLSTLPNTLILGIPLLKAMYGAEAEAL-SQIVVLQSLVWY 101