Jatropha Genome Database

JcCA0305691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0305691.10 + phase: 0 /partial
         (218 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30055.m001602 Protein phosphatase 1 regulatory subunit SDS22, pu...   189   1e-48

>30055.m001602 Protein phosphatase 1 regulatory subunit SDS22,
           putative
          Length = 485

 Score =  189 bits (479), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/217 (52%), Positives = 149/217 (68%), Gaps = 4/217 (1%)

Query: 2   VDDFSFIPSNELEVTKEKKRESMSRNTLSKHDMGQSKSIHLDNVSDVNMDLSRFSKKEEV 61
           +DDFS IP NEL V +EK++ S+ +     HD         D          + S+KE+V
Sbjct: 272 IDDFSLIPVNELAVPREKQKNSLRK---IGHDYATDAKTEKDLKKKNKKVEDKLSEKEDV 328

Query: 62  PVHERDDNVVEKKLKRKKSQDQDNSNNDLTMDESKQERKKTIEKLPKKDVQVKGNDKNTV 121
           PV+E  + +VEKKLKRK S +QD+SN DL +++ KQ+RKK  E+  KKDVQV  +D + V
Sbjct: 329 PVYEGGEVMVEKKLKRKLSLEQDDSN-DLGIEDGKQKRKKANEEFSKKDVQVDKDDYDAV 387

Query: 122 EKQRKSKKSTEKLDELDAIDNGETSFADFFSVNYVESSKHSVEKKLIDKAGENINSTGGL 181
           +++ KSKKS E+ DELD ID+G+T FAD F+VN  +S K S EKK++DKAG++IN  GG+
Sbjct: 388 KRKSKSKKSKEEQDELDVIDDGDTPFADLFAVNTADSLKVSGEKKMLDKAGKDINLMGGV 447

Query: 182 VTLSAKKKKTKNRVANHAVQLPAEVEVGMGGPSTWDD 218
           VT+S KKKKTKN  A   VQLPA +EVGMGGPSTW D
Sbjct: 448 VTVSGKKKKTKNCGAGSIVQLPAVIEVGMGGPSTWGD 484