Jatropha Genome Database

JcCA0304891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304891.10 - phase: 0 /partial
         (495 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013632 conserved hypothetical protein                          702   0.0  
28359.m000279 conserved hypothetical protein                          671   0.0  
29955.m001180 conserved hypothetical protein                          451   e-127

>30170.m013632 conserved hypothetical protein
          Length = 762

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/489 (73%), Positives = 394/489 (80%), Gaps = 11/489 (2%)

Query: 6   FLVPSTSAVILKFELLQAPITENRLELLAYLEASSVAVHEFRIPPKALFGLHSYCPIHFD 65
           + VP TSAVILKFEL+ AP+TENRLELLAYLEASSVAVHEFRIPPKAL GLHSYCPIHFD
Sbjct: 103 YKVPPTSAVILKFELIHAPMTENRLELLAYLEASSVAVHEFRIPPKALLGLHSYCPIHFD 162

Query: 66  IFHAVLVEASVHVSLLKAGSHAHKSRFCDHQFLKTRSPCIEINFVIDQALASVSFVAMNK 125
           +FHAVLVEASVH+SLLKAG +   SRF    +  +    I+      Q L    FV MN+
Sbjct: 163 VFHAVLVEASVHLSLLKAGYYPKISRFVTFFYQISNLLLIKC-----QLLGPADFVGMNQ 217

Query: 126 IMLIKTLLVARDTLLEELQRLSKAIAQVIDFTDFTSKMNDINMLDSIRRADLGTAKGEVG 185
           IML+K+LLV+RD LL ELQRLSK+I QVID TDF +KMND+ M DSI RADLGTA GEVG
Sbjct: 218 IMLVKSLLVSRDALLGELQRLSKSIDQVIDLTDFIAKMNDVKMFDSILRADLGTAYGEVG 277

Query: 186 GRGSLQNGLEKANGIPDFEGDKLQYILSNDALENIFHLLGTQLSYLWSTFLQFHRTNKKK 245
           G+   QN  +  N       DKL Y L  +A+ +IFHLLG Q+SYLWSTFLQFHR NK K
Sbjct: 278 GQHKKQNDFKVPNS------DKLPYFLPKEAVGDIFHLLGAQISYLWSTFLQFHRANKIK 331

Query: 246 ILRFLRDAWAKDRRTEWSIWMVYSKVEMPHHYISSGTHDASHIVVDKRVSSFWKLADDPA 305
           IL  LRDAWAKDRR EWSIWMVYSKVEMPHHYISSG+HD+SH +VDKRVSSFWKLA+DP 
Sbjct: 332 ILECLRDAWAKDRRAEWSIWMVYSKVEMPHHYISSGSHDSSHHIVDKRVSSFWKLANDPV 391

Query: 306 QTAATRAELHRRSIAQMRINASSIQDMYIFGDPLRVPIIYVERVINAPRRTFSENSYFRN 365
           QTAATRAELHRRSI QMRIN  SIQDMYIFGDPLR+PII+VERVINAPRRT SENSYFR+
Sbjct: 392 QTAATRAELHRRSIGQMRINTRSIQDMYIFGDPLRIPIIFVERVINAPRRTLSENSYFRD 451

Query: 366 LDLIDSPSXXXXXXXXXXXXXXXXNSHKKSRELKIVVFVHGFQGHHLDLRLIRNQWLLID 425
           LDLIDSP                 N  KK RELKIVVFVHGFQGHHLDLRL+RNQWLLID
Sbjct: 452 LDLIDSPGLLSEPGTEALRKIHRGNLRKKRRELKIVVFVHGFQGHHLDLRLVRNQWLLID 511

Query: 426 PKIEILMSEANEEKTSGDFREMGLRLAQEVISFLKKKSDKYSRSGGLRDIKLSFVGHSIG 485
           PKIE+LMS+ NEEKTSGDFREMGLRLA EVISF+K+K +KYSRSGG R+IKLSFVGHSIG
Sbjct: 512 PKIEVLMSQVNEEKTSGDFREMGLRLASEVISFIKRKVEKYSRSGGPREIKLSFVGHSIG 571

Query: 486 NVIIRTALA 494
           NVIIR ALA
Sbjct: 572 NVIIRAALA 580


>28359.m000279 conserved hypothetical protein
          Length = 808

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/492 (68%), Positives = 378/492 (76%), Gaps = 16/492 (3%)

Query: 9   PSTSAVILKFELLQAPITENRLELLAYLEASSVAVHEFRIPPKALFGLHSYCPIHFDIFH 68
           PSTSAVILKFELLQAPITEN+LELLAYL+ASSVAVHEFRIPPKAL GLHSYCP+HFD FH
Sbjct: 145 PSTSAVILKFELLQAPITENQLELLAYLDASSVAVHEFRIPPKALLGLHSYCPVHFDAFH 204

Query: 69  AVLVEASVHVSLLKAGSHAHKSRFCDHQFLKTRSPCIEINFV------IDQALASVSFVA 122
           AVLV+ +VH+SLLKAGS+     +           CI  +         +  L S++ V 
Sbjct: 205 AVLVDLTVHISLLKAGSYMKVPSY----------SCIPEDIARQRIDGFNTTLGSMASVD 254

Query: 123 MNKIMLIKTLLVARDTLLEELQRLSKAIAQVIDFTDFTSKMNDINMLDSIRRADLGTAKG 182
           M +IML+K LLVAR+TLLEELQ+ SKAI Q ID TDFTSKM+D+ MLDSI  ++LGTA G
Sbjct: 255 MKQIMLVKALLVARETLLEELQKFSKAIEQAIDLTDFTSKMDDVEMLDSIMGSNLGTADG 314

Query: 183 EVGGRGSLQNGLEKANGIPDFEGDKLQYILSNDALENIFHLLGTQLSYLWSTFLQFHRTN 242
           EV G+G  QN LEKANG   F  D LQ I+S  A  NIFH LG QLSYLW  FLQFHR N
Sbjct: 315 EVSGQGKPQNVLEKANGGVYFRSDVLQCIMSEAAAVNIFHSLGAQLSYLWGVFLQFHRVN 374

Query: 243 KKKILRFLRDAWAKDRRTEWSIWMVYSKVEMPHHYISSGTHDASHIVVDKRVSSFWKLAD 302
           + +IL FLR AWAKDRR EWSIW+V SKVEMPHHYISS   ++S+    +RV +FWKL D
Sbjct: 375 RTRILDFLRMAWAKDRRAEWSIWIVSSKVEMPHHYISSRNDESSNYAGSRRVLTFWKLPD 434

Query: 303 DPAQTAATRAELHRRSIAQMRINASSIQDMYIFGDPLRVPIIYVERVINAPRRTFSENSY 362
           DPAQTAA RAELHRRSIAQM+IN  SIQDM+IFGDPLR+PII VERV+NAPRRT SENSY
Sbjct: 435 DPAQTAAMRAELHRRSIAQMKINNQSIQDMHIFGDPLRIPIIIVERVMNAPRRTLSENSY 494

Query: 363 FRNLDLIDSPSXXXXXXXXXXXXXXXXNSHKKSRELKIVVFVHGFQGHHLDLRLIRNQWL 422
           F NLDL+DSPS                N  +   ELK+VVFVHGFQGHHLDLRL+RNQWL
Sbjct: 495 FTNLDLLDSPSLHTQPSMEAGKRLSGNNLKQNGHELKVVVFVHGFQGHHLDLRLVRNQWL 554

Query: 423 LIDPKIEILMSEANEEKTSGDFREMGLRLAQEVISFLKKKSDKYSRSGGLRDIKLSFVGH 482
           L+DPKIE LMSE NE+KTSGDFREMG RLAQEVISFLKKK DK SRS  LR IKLSFVGH
Sbjct: 555 LVDPKIEFLMSEVNEDKTSGDFREMGQRLAQEVISFLKKKMDKVSRSCSLRGIKLSFVGH 614

Query: 483 SIGNVIIRTALA 494
           SIGNVIIRTALA
Sbjct: 615 SIGNVIIRTALA 626


>29955.m001180 conserved hypothetical protein
          Length = 688

 Score =  451 bits (1161), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/497 (48%), Positives = 313/497 (62%), Gaps = 26/497 (5%)

Query: 1   MHSLAFLVPSTSAVILKFELLQAPITENRLELLAYLEASSVAVHEFRIPPKALFGLHSYC 60
           +H+     P T  V+LKFEL+  P  +   EL   L A   AVHEFR+PPKAL GLHSYC
Sbjct: 128 LHAHGVEGPPTPGVVLKFELMYTPALKKGSELQGSLSACPAAVHEFRLPPKALLGLHSYC 187

Query: 61  PIHFDIFHAVLVEASVHVSLLKAGSHAHKSRFCDHQFLKTRSPCIEINFVIDQALASVSF 120
           P+HFD FH+VLV+ SVH+  +KA                + +P     F   + + S  F
Sbjct: 188 PVHFDAFHSVLVDTSVHIITVKA----------------SWTPLKVPWFASLRQVGSADF 231

Query: 121 VAMNKIMLIKTLLVARDTLLEELQRLSKAIAQVIDFTDFTSKMNDINMLDSIRRADLGTA 180
               +I+LIK L+ A D LL++L+ +S+AI Q I+ + F   + +     S+ ++++G A
Sbjct: 232 ---EQILLIKELVAAHDILLDDLRNISRAIDQSIELSSFVLNLENTK-FGSLMQSNMGGA 287

Query: 181 KGEVGGRGSLQNGLEKANGIPDFEGDKLQYILSNDALENIFHLLGTQLSYLWSTFLQFHR 240
           +  +      QNG++K N   + + D L + LS D + +  HLLG Q+ +LW+ FL FHR
Sbjct: 288 EEVLEVLNKPQNGVKKENDTANLQNDGLLHCLSRDDILDFLHLLGDQILHLWNAFLMFHR 347

Query: 241 TNKKKILRFLRDAWAKDRRTEWSIWMVYSKVEMPHHYISSGTHDASHIVVDKRVSSFWKL 300
            NK KIL FL D W   RR EWSIWM+++KVE P +++SSG    S   +  +  S WK 
Sbjct: 348 ANKTKILEFLHDVWNDGRRAEWSIWMIHTKVERPLNFLSSGIGAPSLHGLHGKSLSQWKF 407

Query: 301 ADDPAQTAATRAELHRRSIAQMRINASSIQDMYIFGDPLRVPIIYVERVINAPRRTFSEN 360
           +DDP Q+A TRAELHR+SIAQMRIN  SIQDM+++ DPL VPII VE V +AP    + N
Sbjct: 408 SDDPVQSAITRAELHRQSIAQMRINNRSIQDMHMYEDPLSVPIIIVEHVSDAPLHNHNGN 467

Query: 361 ---SYFRNLDLIDSPSXXXXXXXXXXXXXXXXNSHKKSRELKIVVFVHGFQGHHLDLRLI 417
              SY    +L+  P+                 S    R +KIVVFVHGFQGHHLDLRL+
Sbjct: 468 SCISYLYQKNLLKIPT---GTKSGAVQKLTGSRSQPCGRVMKIVVFVHGFQGHHLDLRLV 524

Query: 418 RNQWLLIDPKIEILMSEANEEKTSGDFREMGLRLAQEVISFLKKKSDKYSRSGGLRDIKL 477
           RNQWLLIDPK E LMSEANE+KT GDFREMGLRLAQEV+SF K+K DK SR+G L+ +KL
Sbjct: 525 RNQWLLIDPKTEFLMSEANEDKTDGDFREMGLRLAQEVVSFTKRKMDKASRNGNLKSLKL 584

Query: 478 SFVGHSIGNVIIRTALA 494
           SFVGHSIGN+IIR ALA
Sbjct: 585 SFVGHSIGNIIIRAALA 601