Jatropha Genome Database
- JcCA0304431.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0304431.30 - phase: 1 /pseudo/partial
(119 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013772 natural resistance-associated macrophage protein, ... 120 1e-28
29970.m001011 natural resistance-associated macrophage protein, ... 113 2e-26
29648.m002003 metal transporter, putative 79 3e-16
29648.m002004 metal transporter, putative 77 2e-15
29588.m000852 metal transporter, putative 70 2e-13
30078.m002320 ethylene insensitive protein, putative 47 1e-06
>30170.m013772 natural resistance-associated macrophage protein,
putative
Length = 462
Score = 120 bits (301), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/65 (84%), Positives = 61/65 (93%)
Query: 54 SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
+ LDPGNLE DLQAGAIAGYSLLWLL+WATVMGLLIQ+LSARVGVA GRHLA+LCREEYP
Sbjct: 86 AFLDPGNLEGDLQAGAIAGYSLLWLLMWATVMGLLIQMLSARVGVATGRHLAELCREEYP 145
Query: 114 NWSTI 118
NW+ +
Sbjct: 146 NWARL 150
>29970.m001011 natural resistance-associated macrophage protein,
putative
Length = 509
Score = 113 bits (283), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/63 (80%), Positives = 58/63 (92%)
Query: 54 SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
+ LDPGNLE DLQAGAIAGYSLLWLL+WAT MGLL+Q+LSAR+GVA GRHLA+LCREEYP
Sbjct: 66 AFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCREEYP 125
Query: 114 NWS 116
W+
Sbjct: 126 TWA 128
>29648.m002003 metal transporter, putative
Length = 498
Score = 79.3 bits (194), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 46/60 (76%)
Query: 56 LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYPNW 115
LDPGNLE DLQAGA GY LLW+++ + L+IQ L+A +GV+ G+HL++LC+ EYP +
Sbjct: 69 LDPGNLETDLQAGANHGYELLWVILIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPKY 128
>29648.m002004 metal transporter, putative
Length = 528
Score = 77.0 bits (188), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 56 LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
LDPGNLE DLQAGA Y LLW+++ A + L+IQ L+A +GV+ G+HL++LC+ EYP
Sbjct: 56 LDPGNLETDLQAGANHKYELLWVILIALIFALIIQSLAANLGVSTGKHLSELCKAEYP 113
>29588.m000852 metal transporter, putative
Length = 546
Score = 70.5 bits (171), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 56 LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
+DPGN E DLQ+GA Y LLW+++ A+ L+IQ L+A +GV G+HLA+ CR EYP
Sbjct: 64 IDPGNFETDLQSGAQYKYGLLWIILVASCAALVIQSLAANLGVVTGKHLAEHCRIEYP 121
>30078.m002320 ethylene insensitive protein, putative
Length = 1290
Score = 47.4 bits (111), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 56 LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYPNW 115
+DPG ++ GA G+ L+ ++ + +L Q LSAR+GV GR LA++C EY +
Sbjct: 33 VDPGKWAATVEGGARFGHDLIVPMLIFSFAAILCQYLSARIGVVTGRDLAQICSAEYDKF 92
Query: 116 STI 118
+ +
Sbjct: 93 TCM 95