Jatropha Genome Database

JcCA0304431.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304431.20 - phase: 0 /TE
         (1368 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30154.m001141 conserved hypothetical protein                           69   2e-11
30154.m001140 conserved hypothetical protein                           63   8e-10
29853.m000370 conserved hypothetical protein                           56   1e-07
29625.m000683 conserved hypothetical protein                           55   2e-07
30165.m000272 hypothetical protein                                     50   6e-06

>30154.m001141 conserved hypothetical protein
          Length = 121

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 1290 ITAANEKYKTATDKHRCYKSFTMGDWVMIYLRKEH---GEGQKKLDSKKIGPFQVLKKIN 1346
            I  AN KYK   + HR +K F +GD V+I+LRKE    G   K    KK GP +++K++N
Sbjct: 4    IEKANAKYKVVAEMHRKHKVFDVGDEVIIFLRKERIPIGHSNK-FKPKKYGPCKIIKEVN 62

Query: 1347 DNVYVIDLPEDMKISKTFNVAD 1368
             N YV D    + I KTFNVAD
Sbjct: 63   GNAYVADFSNWLNIFKTFNVAD 84


>30154.m001140 conserved hypothetical protein
          Length = 100

 Score = 63.2 bits (152), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 10 QNYKIKADLQSFSGSLD--VESILDWLAEVECFFEIMNVEDERKASIVAYKLKGGAAAWW 67
          Q Y     L  F   L+  +E  LD + EV+ FFE M V  ERK   V Y+LKGGA+ WW
Sbjct: 22 QAYDEDQGLLQFGEQLNSNIEGFLDLMTEVDMFFEYMKVPKERKMKFVTYRLKGGASVWW 81

Query: 68 HSIQNERHRRRIEPVQDW 85
            +   R R    P+  W
Sbjct: 82 DRLNEMRQREGRNPIATW 99


>29853.m000370 conserved hypothetical protein
          Length = 177

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 36/57 (63%)

Query: 332 QRRKIFXVKCHVGEAVCRLIIDSCSCENLIAKQLVEKLNLPTERHPSPYKVGWIKEG 388
           QR  +F  +C VG +   +IIDS SC N++ +++V  LNLPT  HP  Y + WI EG
Sbjct: 120 QRENLFHTRCLVGTSSLSVIIDSGSCCNILNEKVVRVLNLPTSPHPQLYSLQWISEG 176


>29625.m000683 conserved hypothetical protein
          Length = 124

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 39/72 (54%)

Query: 14  IKADLQSFSGSLDVESILDWLAEVECFFEIMNVEDERKASIVAYKLKGGAAAWWHSIQNE 73
           ++ ++  F GSL  E  LDWLA VE   +   V++++   +VA +LKG A AWW   +  
Sbjct: 46  MRTEIPEFHGSLQAEEFLDWLATVEEILDFKGVQEDKCVPLVATRLKGRAIAWWQQSKLT 105

Query: 74  RHRRRIEPVQDW 85
           R R   + +  W
Sbjct: 106 RTRLGKDKIATW 117


>30165.m000272 hypothetical protein
          Length = 136

 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%)

Query: 14 IKADLQSFSGSLDVESILDWLAEVECFFEIMNVEDERKASIVAYKLKGGAAAWWHSIQNE 73
          IK  + SF G  D +  L+W  +VE  FE  N  +E+K  + A +    A  WW     E
Sbjct: 16 IKMKIPSFQGRNDPDVYLEWERKVELIFECHNYSEEKKVKLAAVEFSDYAIVWWDQFCKE 75

Query: 74 RHRRRIEPVQDWI 86
          R R    PV+ WI
Sbjct: 76 RRRYGERPVESWI 88