Jatropha Genome Database

JcCA0304251.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304251.20 + phase: 0 
         (163 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006960 cystathionine beta-lyase, putative                      198   9e-52
29635.m000441 cystathionine gamma-synthase, putative                   78   2e-15
58868.m000013 cystathionine beta-lyase, putative                       75   2e-14
30068.m002577 cystathionine gamma-synthase, putative                   52   9e-08

>30131.m006960 cystathionine beta-lyase, putative
          Length = 467

 Score =  198 bits (504), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 97/109 (88%), Positives = 102/109 (93%), Gaps = 2/109 (1%)

Query: 15  RLEGRDVQKNAIAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVM 74
           R +  D++K  IAK+AHTH ALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVM
Sbjct: 233 RQQISDIRK--IAKIAHTHGALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVM 290

Query: 75  AGVLAVKGQSLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
           AGVLAVKG+ LARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ
Sbjct: 291 AGVLAVKGERLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 339


>29635.m000441 cystathionine gamma-synthase, putative
          Length = 425

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 64/98 (65%), Gaps = 1/98 (1%)

Query: 26  IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVLAVKGQSL 85
           ++++ H   A+V +D +  +P+  + L LGAD+++HSATKFI GH+DV+AG ++   + L
Sbjct: 202 VSELCHRKGAIVCIDGTFATPLNQKALALGADLILHSATKFIGGHNDVLAGCISGSAK-L 260

Query: 86  ARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
             ++  L +  G  L P   ++ +RG+KT+ LRV++Q 
Sbjct: 261 VSEIRNLHHILGGTLNPNAAYLIIRGMKTLHLRVQQQN 298


>58868.m000013 cystathionine beta-lyase, putative
          Length = 187

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 66/110 (60%), Gaps = 7/110 (6%)

Query: 25  AIAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVLAVKGQS 84
           AI ++AH H A+V +DN+  +P+  +PL+ G D+ + ++TK+ AGH+DV+ G ++     
Sbjct: 48  AIVEVAHRHDAIVTMDNTWATPLFFRPLDAGVDVSIQASTKYPAGHADVLMGTISAN--- 104

Query: 85  LARDLYFLQNAEGS-GL--APFDCWICLRGIKTMALRVEKQQVLILTQPK 131
            A+    L+ A G+ G    P D +  LRG++TM +R+E+ Q   L   K
Sbjct: 105 -AKHWPTLKRANGALGFCGTPDDAYQVLRGLRTMGVRLERHQASSLAVAK 153


>30068.m002577 cystathionine gamma-synthase, putative
          Length = 449

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 39/53 (73%), Gaps = 1/53 (1%)

Query: 26  IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVL 78
           ++++AH     V+VDN+  +P++  P  LGAD+V+HS TKFI+G +D++AG +
Sbjct: 214 LSRIAHDKGVTVVVDNTF-APMVISPARLGADVVVHSITKFISGGADIIAGAV 265