Jatropha Genome Database

JcCA0304141.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304141.30 - phase: 0 /partial
         (295 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29794.m003436 catalytic, putative                                     524   e-149

>29794.m003436 catalytic, putative
          Length = 983

 Score =  524 bits (1349), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/295 (84%), Positives = 269/295 (91%)

Query: 1   VVHTQAKVIADQEVMYKYISRNLLFVVTVAPKAAGGIGSATPDESWLVAYLIDTITGRIL 60
           VVHTQAKVIADQ+VMYKYIS+NLLFVVTV PKA GGIG+ATP+ESWLVAYLIDT+TGRIL
Sbjct: 689 VVHTQAKVIADQDVMYKYISKNLLFVVTVTPKAIGGIGTATPEESWLVAYLIDTVTGRIL 748

Query: 61  HRMTHHGSHGPVRAVFSENWVVYHYFNLKAHRYEMSVIEIYDQSRADNKDVLKLVLGKHN 120
           HRMTHHG++GPV AVFSENWVVYHYFNL+AHRYEMSVIEIYDQSRADNKDV KL+LGKHN
Sbjct: 749 HRMTHHGANGPVHAVFSENWVVYHYFNLRAHRYEMSVIEIYDQSRADNKDVWKLLLGKHN 808

Query: 121 LTAPVSSYSRPEVTTKSQSYYFTHSVKAIAVTFTAKGITSKQLLIGTIGDQVLALDKRFL 180
           LT+P+SSYSRPEV TKSQSY+FTHSVKAIAVT T KGITSKQLL+GTIGDQVLALDKRFL
Sbjct: 809 LTSPISSYSRPEVITKSQSYFFTHSVKAIAVTSTTKGITSKQLLLGTIGDQVLALDKRFL 868

Query: 181 DPRRTINPTQAEKEEGIIPLTDSLPIIPQSYVTHALQVEGLRGIISAPAKLESTTLVFVY 240
           DPRR+INPTQAEKEEGI+PLTDSLPI+PQSYVTHALQVEGLRGII+ PAKLESTTLVF Y
Sbjct: 869 DPRRSINPTQAEKEEGILPLTDSLPIMPQSYVTHALQVEGLRGIITVPAKLESTTLVFAY 928

Query: 241 GVDLFFTRLAPSRTYDSLTEDFSYXXXXXXXXXXXXXXXXXWILSERKELQDKWR 295
           GVDLFFTR+APSRTYDSLTEDFSY                 WILSE+KEL+DKWR
Sbjct: 929 GVDLFFTRIAPSRTYDSLTEDFSYALLLLTIVALVVAIFATWILSEKKELRDKWR 983