Jatropha Genome Database

JcCA0302931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302931.10 - phase: 0 
         (412 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004507 leucine zipper-ef-hand containing transmembrane pr...   637   0.0  
29678.m000507 leucine zipper-ef-hand containing transmembrane pr...   444   e-125
30146.m003538 hypothetical protein                                     54   1e-07

>29929.m004507 leucine zipper-ef-hand containing transmembrane
           protein, putative
          Length = 758

 Score =  637 bits (1642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/415 (77%), Positives = 344/415 (82%), Gaps = 6/415 (1%)

Query: 1   MASRAILRRKRFLLSSLNQPTCWIRSFSSSEHGEPTQSGGLEGSRWVVSHPSANCDHRYE 60
           MASRA+LRRKR L SSLNQPTC I SFSS +HG+ +Q    EGSRWV  HPS + D R+ 
Sbjct: 1   MASRALLRRKRSLFSSLNQPTCLIPSFSSFKHGQLSQPSFSEGSRWVDCHPSGDTDCRFS 60

Query: 61  GGFSLVVRDETL--LEASFLGHSSLGFSTLGHRTGRRDFDSSS-GIRWFSNSVRFSSTAT 117
              S VVRD  L  L A FL H+S G STL  + G   FDSSS GIRWFS+SVRFSSTAT
Sbjct: 61  ---SSVVRDGNLGLLAADFLRHNSFGISTLARQIGSPGFDSSSLGIRWFSHSVRFSSTAT 117

Query: 118 AGQPEFGSGKDRNEQQAAKQVKEASPEECDEAVEDLTEVXXXXXXXQVQELQKSSKSILQ 177
           AGQPEF SG DRNE+QA K++KEAS EECDEAVEDLTEV       QVQE QKSSKS++Q
Sbjct: 118 AGQPEFRSGNDRNEKQATKKMKEASAEECDEAVEDLTEVKAKAKAKQVQESQKSSKSVIQ 177

Query: 178 RIWAMLLGIGPALRAVASMSREDWAKKLRHWKDEFKSTMQHYWLGTKLLWADVRISSRLL 237
           R+WA+LLGIGPALRA+ASMSREDWAKKLRHWKDEFKSTMQHYWLGTKLLWADVRISSRLL
Sbjct: 178 RMWAVLLGIGPALRAIASMSREDWAKKLRHWKDEFKSTMQHYWLGTKLLWADVRISSRLL 237

Query: 238 VKLASGKGLSRRERQQLTRTTADIFRLVPFAVFIIVXXXXXXXXXXXXXXXXXXXSTFQD 297
           VKLASGKGLSRRERQQL RTTADIFRLVPFAVFIIV                   STFQD
Sbjct: 238 VKLASGKGLSRRERQQLMRTTADIFRLVPFAVFIIVPFMEFLLPVFLKLFPNMLPSTFQD 297

Query: 298 KMKEQEALKRKLNARIEYAKFLQDTVKEMAKEIQNSRSGEAKKTAEDLDGFMSKVRKGAR 357
           +MKEQEALKRKLNARIEYAKFLQDTVKEMAKEIQNSRSGE K+TAEDLD FM+KVR GAR
Sbjct: 298 RMKEQEALKRKLNARIEYAKFLQDTVKEMAKEIQNSRSGETKQTAEDLDEFMNKVRTGAR 357

Query: 358 VSNEEILGFAKLFNDELTLDNISRPRLVNMCKYMGISPYGTDAYLRYMLRRRLQE 412
           V+NEEILGFAKLFNDELTLDNISRPRLVNMCKYMGISPYGTDAYLRYMLRRRLQE
Sbjct: 358 VANEEILGFAKLFNDELTLDNISRPRLVNMCKYMGISPYGTDAYLRYMLRRRLQE 412


>29678.m000507 leucine zipper-ef-hand containing transmembrane
           protein, putative
          Length = 731

 Score =  444 bits (1143), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/423 (58%), Positives = 295/423 (69%), Gaps = 29/423 (6%)

Query: 1   MASRAILRRKRFLLSSLNQPTCWIRSFSSSEHGEPTQSGGLEGSRWVVSHPSANCDHRYE 60
           MASRAILRRK F+   ++  TC I++F    H     +  L+ + +  + P ++ D    
Sbjct: 1   MASRAILRRKSFISDYVHASTCSIQTFQYIGHA---AAQTLDSNSY--NQPESSLDF--- 52

Query: 61  GGFSLVVRDETLLEASFLGHSSLG-FST----------LGHRTGRRDFDSSSGIRWFSNS 109
               +V R      A  +G S  G FST          LG    R +F     +R  + S
Sbjct: 53  NNIKVVAR------AELVGFSGAGLFSTRRFCSMSTAVLGVGNVRSEF--VYPMRLMTVS 104

Query: 110 VRFSSTA-TAGQPEFGSGKDRNEQQAAKQVKEASPEECDEAVEDLTEVXXXXXXXQVQEL 168
           +R +STA TA QP+F S  + + +  +K+ KEA PEECD+AVE L+         ++ + 
Sbjct: 105 IRNASTAATAKQPDF-SDDEEDGEIVSKRRKEALPEECDQAVEGLSTAKAKVKAKRLHDS 163

Query: 169 QKSSKSILQRIWAMLLGIGPALRAVASMSREDWAKKLRHWKDEFKSTMQHYWLGTKLLWA 228
           QK ++S+L+R WAMLLG+GPALRAVASMSR DW KKL HWK E  ST++HYWLG KLLW 
Sbjct: 164 QKVAESVLRRTWAMLLGVGPALRAVASMSRADWTKKLGHWKHEIVSTLKHYWLGFKLLWV 223

Query: 229 DVRISSRLLVKLASGKGLSRRERQQLTRTTADIFRLVPFAVFIIVXXXXXXXXXXXXXXX 288
           DVRISSRLL+KLA G+ LSRRERQQLTRTTADIFRLVPFAVFIIV               
Sbjct: 224 DVRISSRLLLKLAGGRSLSRRERQQLTRTTADIFRLVPFAVFIIVPFMEFLLPVFLKLFP 283

Query: 289 XXXXSTFQDKMKEQEALKRKLNARIEYAKFLQDTVKEMAKEIQNSRSGEAKKTAEDLDGF 348
               STFQDKMKE+EALKR+LNARIEYAKFLQDTVKEMAKE+Q+SRSGE KKTAEDLD F
Sbjct: 284 NMLPSTFQDKMKEEEALKRRLNARIEYAKFLQDTVKEMAKEVQHSRSGEIKKTAEDLDEF 343

Query: 349 MSKVRKGARVSNEEILGFAKLFNDELTLDNISRPRLVNMCKYMGISPYGTDAYLRYMLRR 408
           ++KVR+GA VSNEEILGFAKLFNDELTLDNISR RLV+MCKYMGISP+GTDAYLRYMLR+
Sbjct: 344 LTKVRRGAGVSNEEILGFAKLFNDELTLDNISRSRLVSMCKYMGISPFGTDAYLRYMLRK 403

Query: 409 RLQ 411
           RLQ
Sbjct: 404 RLQ 406


>30146.m003538 hypothetical protein
          Length = 740

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 205 LRHWKDEFKSTMQHYWLGTKLLWADVRISSRLLVKLASGKGLSRRERQQLTRTTADIFRL 264
           L+ +  +  ST    W+GT+LL+ D+  +  LL+K   G  +SRRER++L RT  DI  L
Sbjct: 602 LKRYGVKLASTSSDVWMGTQLLFVDIIDTMELLLKQMRGHKVSRRERRKLKRTLNDIATL 661

Query: 265 VPFAVFIIV 273
           +P  + +++
Sbjct: 662 IPITILMLL 670