Jatropha Genome Database

JcCA0302361.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302361.30 - phase: 0 
         (198 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008752 conserved hypothetical protein                          311   1e-85
30128.m008751 conserved hypothetical protein                          212   1e-55
30170.m014237 conserved hypothetical protein                          119   1e-27
30170.m013802 conserved hypothetical protein                          116   9e-27

>30128.m008752 conserved hypothetical protein
          Length = 234

 Score =  311 bits (798), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 160/232 (68%), Positives = 176/232 (75%), Gaps = 35/232 (15%)

Query: 1   MRGGNNESEFRNHQQPVLAVPPLNSVPYIG------------------------------ 30
           M GGNN+S+F+N QQ  LAVPPLNSVPYIG                              
Sbjct: 1   MHGGNNQSDFQNSQQIPLAVPPLNSVPYIGPGPVNSAPYIGPPRPVNSAPYIGPPRSVNS 60

Query: 31  -----SPGMVVDDTPLPAEDDAQPVEKVGPSMVFLPPSTTQKERDNVLASAKGAVALSGS 85
                SP  VVD + LP E DA+PVEKVGPSMV+L  +TT+KE DN+L SAK AVAL+GS
Sbjct: 61  APDIGSPRPVVDGSSLPTEADAKPVEKVGPSMVYLDSNTTRKEWDNILVSAKSAVALTGS 120

Query: 86  AAMGMVGPALGLMDIGESDDAYLFRVSLPGVARDEKEFSCDIEPDGTILIKGVTTTGEKT 145
           AAMGMVGP +GLMDIGESDDAYLFRVSLPGVA ++KEFSCDIEPDG I I+GVTTTGE+ 
Sbjct: 121 AAMGMVGPIIGLMDIGESDDAYLFRVSLPGVANNKKEFSCDIEPDGKIHIRGVTTTGEQI 180

Query: 146 VCKNSQIFRMQTQNLCPPGHFSITFQLPGPVNHKQFRGHFGNDGMLEGIVKK 197
           VCKNSQIFRMQTQNLCPPGHFSITF LPGPV+HKQFRGHFGNDGMLEGIVKK
Sbjct: 181 VCKNSQIFRMQTQNLCPPGHFSITFHLPGPVDHKQFRGHFGNDGMLEGIVKK 232


>30128.m008751 conserved hypothetical protein
          Length = 409

 Score =  212 bits (539), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 102/181 (56%), Positives = 135/181 (74%), Gaps = 1/181 (0%)

Query: 18  LAVPPLNSVPYIGSPGMVVDDTPLPAEDDAQPVEKVGPSMVFLPPSTTQKERDNVLASAK 77
           + V P +SV Y  +P  V   T LP  ++ + VE   P M+FLP    ++E   ++A+ +
Sbjct: 226 IHVAPFSSVRY-NAPPPVQRYTTLPIRNNTRTVENGSPGMLFLPSCPKKEELTRIIAAGR 284

Query: 78  GAVALSGSAAMGMVGPALGLMDIGESDDAYLFRVSLPGVARDEKEFSCDIEPDGTILIKG 137
              AL+GSAAMG VGP +GLMDIGE +D+Y+FR+SLPGV RDE++FSC +E DG +LIKG
Sbjct: 285 SGFALTGSAAMGQVGPIIGLMDIGECEDSYMFRISLPGVKRDEEDFSCVVENDGMVLIKG 344

Query: 138 VTTTGEKTVCKNSQIFRMQTQNLCPPGHFSITFQLPGPVNHKQFRGHFGNDGMLEGIVKK 197
           VTTTGE+TV + SQ+F MQ++NLCPPG FSI+FQLPGPVN +QF G+FG DG+LEGIV K
Sbjct: 345 VTTTGERTVYRFSQVFEMQSKNLCPPGEFSISFQLPGPVNPRQFSGNFGTDGILEGIVMK 404

Query: 198 K 198
           +
Sbjct: 405 Q 405


>30170.m014237 conserved hypothetical protein
          Length = 143

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 85/122 (69%)

Query: 77  KGAVALSGSAAMGMVGPALGLMDIGESDDAYLFRVSLPGVARDEKEFSCDIEPDGTILIK 136
           K  + L+G+A  G  GP +GL DIG S+DAYLFRV+LPG+ ++E    C+I  DGT+ ++
Sbjct: 13  KPPMVLTGTANEGSAGPPIGLTDIGVSEDAYLFRVALPGLRKNECSVKCEILHDGTVHVR 72

Query: 137 GVTTTGEKTVCKNSQIFRMQTQNLCPPGHFSITFQLPGPVNHKQFRGHFGNDGMLEGIVK 196
           GV T     +  +S +F+++ Q LCPPG F+I+F+LPGPV+ + F  +F  DG+LEG+V 
Sbjct: 73  GVVTPDGGILRDSSGVFQLRVQQLCPPGPFTISFKLPGPVDPRLFCPNFRADGILEGVVM 132

Query: 197 KK 198
           K+
Sbjct: 133 KQ 134


>30170.m013802 conserved hypothetical protein
          Length = 392

 Score =  116 bits (290), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 54/118 (45%), Positives = 81/118 (68%), Gaps = 1/118 (0%)

Query: 80  VALSGSAAMGMVGPALGLMDIGESDDAYLFRVSLPGVARDEKEFSCDIEPDGTILIKGVT 139
           + L+G+A  G  GP +G++DIG S +AY F+V+LPGV RD  EF C+IE  G + I+G  
Sbjct: 274 IVLTGTARKGRTGPQVGVVDIGISRNAYFFQVALPGVRRDFCEFGCEIESSGKVHIQGTM 333

Query: 140 TTGEKTVCKNSQIFRMQTQNLCPPGHFSITFQLPGPVNHKQFRGHFGNDGMLEGIVKK 197
           + GE T+ K S++FRM+ + LCP G F+++F LPGPV+ + F  +F  DG+ E ++ K
Sbjct: 334 SGGE-TIKKRSRVFRMKFRRLCPAGPFTLSFNLPGPVDPRLFSPNFRTDGIFEAVIIK 390