Jatropha Genome Database
- JcCA0302221.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0302221.10 + phase: 0 /pseudo
(352 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29904.m002893 ubiquitin-protein ligase, putative 79 3e-15
29751.m001829 ubiquitin-protein ligase, putative 77 2e-14
29630.m000832 ubiquitin-protein ligase, putative 69 3e-12
29904.m002894 ubiquitin-protein ligase, putative 66 3e-11
29726.m003927 ubiquitin-protein ligase, putative 62 3e-10
29206.m000142 conserved hypothetical protein 57 9e-09
29822.m003457 conserved hypothetical protein 57 1e-08
29907.m000633 hypothetical protein 57 2e-08
29806.m000946 conserved hypothetical protein 55 4e-08
30026.m001472 conserved hypothetical protein 54 8e-08
29206.m000146 ubiquitin-protein ligase, putative 54 1e-07
29729.m002397 conserved hypothetical protein 53 2e-07
29843.m000289 conserved hypothetical protein 52 4e-07
28962.m000442 conserved hypothetical protein 49 3e-06
29939.m000543 hypothetical protein 49 4e-06
29844.m003355 hypothetical protein 48 8e-06
>29904.m002893 ubiquitin-protein ligase, putative
Length = 406
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 15/129 (11%)
Query: 3 LLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSKTLIFCH----- 57
L ED++ +ILSR+PVK L+RFKCV +SW S+ +P F L R A + I C+
Sbjct: 53 LPEDLIVEILSRVPVKPLLRFKCVSKSWNSIISDPRFAKLQLKR-AKENSNISCNRLLLS 111
Query: 58 ------YDYEXXXXXXXXXXXXXLT-PVILHKPSVLEGSDILGSCNNGLVCLYAPSGSLY 110
D+E ++ P I+ P ILGSC +GLVCL G+++
Sbjct: 112 TWSPRSLDFEAFCDDDLSNTITNVSFPAIVKGPPTFY-VRILGSC-DGLVCLLDDYGTMF 169
Query: 111 LWNPATREY 119
LWNP TR+Y
Sbjct: 170 LWNPTTRQY 178
>29751.m001829 ubiquitin-protein ligase, putative
Length = 358
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 2 NLLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSKT----LIFCH 57
+L DI+ D+L R+PVK+L+RF+C+ +S+ +L +NP+FI HL+ S +K ++ H
Sbjct: 3 SLFPDIIFDVLLRLPVKTLLRFRCISKSYCTLIDNPDFIKAHLDTSIQTKPRKKLILLRH 62
Query: 58 YDYEXXXXXXXXXXXXXLTPVILHKP--SVLEGSDILGSCNNGLVCLYAPSGSLYLWNPA 115
+ P+ L P S G+ I+GSCN+ LV L + L LWNP
Sbjct: 63 QSNGVAEFYAADHNGGLIDPIKLKSPIKSKSNGTRIVGSCNS-LVLLMQNTDKLLLWNPF 121
Query: 116 TREY 119
T +Y
Sbjct: 122 TTQY 125
>29630.m000832 ubiquitin-protein ligase, putative
Length = 414
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 3 LLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRS---ASSKTLIFC--H 57
L +++ +IL+R+PV L+RF+ + +SW + ++PNFI HL +S S+ TLIF H
Sbjct: 5 LPPELLTEILTRLPVDCLLRFRSISKSWCAKIDDPNFIKTHLKKSRETNSNLTLIFAGSH 64
Query: 58 YDYEXXXXXXXXXXXXXLTPVILHKPSVLEGSDILGSCNNGLVCLYAPSGSLYLWNPATR 117
DY L I I+GSC NGL+C SG + L NP+TR
Sbjct: 65 PDYFYNVNLDSLNSIIKLENPIKGPTDASHNIKIVGSC-NGLLCFGNASGRITLMNPSTR 123
Query: 118 EY 119
++
Sbjct: 124 KH 125
>29904.m002894 ubiquitin-protein ligase, putative
Length = 257
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 3 LLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSKTLIFCHY---- 58
L +D++ +ILSR+PVK L+RFKC+ ++W SL NP F L R+ + + HY
Sbjct: 4 LPQDLITEILSRVPVKPLIRFKCICKTWNSLISNPEFAKLQLKRAKENNN-VSNHYRLLL 62
Query: 59 --------DYEXXXXXXXXXXXXXLT-PVILHKPSVLEGSDILGSCNNGLVCLYAP-SGS 108
DYE L+ I P+ ILGSC +GLV LY S
Sbjct: 63 ATWPPQSLDYEAYCNDDISNALRKLSYHAIAKDPNDNYDVRILGSC-DGLVYLYNEYHDS 121
Query: 109 LYLWNPATREY 119
++LWNP +Y
Sbjct: 122 MFLWNPTIGDY 132
>29726.m003927 ubiquitin-protein ligase, putative
Length = 358
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 2 NLLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSKTLIFCH---- 57
NL++D+V IL R+PVKSL RFK V +SW L +P+FI+ HL+ A+ I CH
Sbjct: 3 NLVQDVVLHILLRLPVKSLCRFKVVCKSWWLLISDPHFISMHLSL-ATKNNCINCHRWRL 61
Query: 58 ------------YDYEXXXXXXXXXXXXXLTPVILHKPSVLEGSDILGSCNNGLVCLYAP 105
YE L K + +GSC NGL+C+ +
Sbjct: 62 CLTSFSLPSVYSVGYEASDRAIAIKLGYPL------KSDCYDEVKFIGSC-NGLLCVASE 114
Query: 106 SGSLYLWNPATRE 118
G L L NP+TR
Sbjct: 115 PGVLLLLNPSTRA 127
>29206.m000142 conserved hypothetical protein
Length = 395
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 5 EDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSKT---LIFCHYDYE 61
+DIV D+L +PVK+L+RF+C+ + SL ++P+FI HL+ S +++ LI ++
Sbjct: 6 DDIVSDVLLLLPVKALLRFRCLSKPLCSLIDSPDFIDHHLSHSLKTRSNLFLILRDWNLY 65
Query: 62 XXXXXXXXXXXXXLTPVILHKPSVLEGSDILGSCNNGLVCLYAPSGSLYLWNPATREY 119
V++H G++ +GSC NGL+ L L L+NPATR+Y
Sbjct: 66 TLDFDSLSSVSPAAADVLIHPLQKGGGTEAVGSC-NGLLALRNSERDLALYNPATRKY 122
>29822.m003457 conserved hypothetical protein
Length = 401
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 3 LLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSKTLIFCHYDYEX 62
L ++I DILSR P+ SL+ K V R W + NP HLNR+A + D+
Sbjct: 22 LPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRAAEQNLCLLFFSDWPR 81
Query: 63 XXXXXXXXXXXXLTPV-ILHKP--SVLEGSDILGSCNNGLVCLYA--PSGSLYLWNPATR 117
+ L P SVL +++GSC NGL+CLY LY++NP T
Sbjct: 82 SKLELVQVEHPEPRKLKTLKTPFESVLSEFEVVGSC-NGLICLYDYFSDDPLYIYNPFTI 140
Query: 118 E 118
E
Sbjct: 141 E 141
>29907.m000633 hypothetical protein
Length = 147
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 5 EDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSKTLI 54
EDI DIL R+PVK L+RFKCV ++W SL +P FI HL S + K +
Sbjct: 6 EDIAIDILLRLPVKPLLRFKCVSKTWYSLISDPCFIKSHLQLSNNHKKFV 55
>29806.m000946 conserved hypothetical protein
Length = 371
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 2 NLLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRS------------AS 49
N+ ++I+ +IL R+PVKSL++++CV +SW SL N +FI+ H+N S
Sbjct: 4 NIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYALVK 63
Query: 50 SKTLIFCHYDYEXXXXXXXXXXXXXLTPVILHKPSVLEGSDILGSCNNGLVCLY-APSGS 108
K++ C + + + +I+ SC NGLVCL +
Sbjct: 64 QKSVPDCKERFILYIDDDSGDEPFRVYQELDFPFKGERYLEIISSC-NGLVCLSDSQYAR 122
Query: 109 LYLWNPATRE 118
YLWNP R+
Sbjct: 123 FYLWNPVIRK 132
>30026.m001472 conserved hypothetical protein
Length = 379
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 59/135 (43%), Gaps = 21/135 (15%)
Query: 6 DIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHL----------------NRSAS 49
DI+ IL R+PVKS++RFK V SWLSL +P F +HL NR +
Sbjct: 27 DIILSILLRLPVKSIIRFKAVHSSWLSLISSPEFSFRHLHHERACFHKHGVIQIRNRHTA 86
Query: 50 SKTL-IFCHYDYEXXXXXXXXXXXXXLTPVILHKPSVLEGSDILGSCNN-GLVCLY---A 104
L + +D P S +++LGSCN LVCL
Sbjct: 87 YPCLSLRSSFDTAAEDVDRDHDLVDIQNPFGEVYHSTYIRAEVLGSCNGLLLVCLIHRDR 146
Query: 105 PSGSLYLWNPATREY 119
S LWNP+TRE+
Sbjct: 147 RSREFLLWNPSTREH 161
>29206.m000146 ubiquitin-protein ligase, putative
Length = 389
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 2 NLLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSK---TLIFCHY 58
NL +++ +IL R+ K L+ +CV + W +L ++P FI HLN S S ++I
Sbjct: 3 NLPLEMIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSIESPCNLSIILKSS 62
Query: 59 DYEXXXXXXXXXXXXXLTPVILHKPSVLEGSDILGSCNNGLVCLYAPSGSLYLWNPATRE 118
+ P++ + G ILGSC NGL+C+ + LWNP+ R
Sbjct: 63 ELYSLSFDLLDNIQPLDHPLMCYN----HGVKILGSC-NGLLCICNIVDDIALWNPSIRA 117
Query: 119 Y 119
+
Sbjct: 118 H 118
>29729.m002397 conserved hypothetical protein
Length = 358
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 1 MNLLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSKTLIFC---- 56
M L +I++DILSR+ VKSLMR +CV ++W +L + +F Q L+RS S L+F
Sbjct: 1 MMLPGNIIQDILSRLDVKSLMRLRCVCKTWFNLISSSSF--QDLHRSRSHHNLLFLFRST 58
Query: 57 ------HYDYEXXXXXXXXXXXXXLTPVILHKPSVLEGSDILGSCNNGLVCLYAPSGSLY 110
+ + V + P L +L SC +GLVC +A +Y
Sbjct: 59 SSSFHNRFFFYSFCSLDVTGSLGARFSVKVDDPIKL----VLPSC-SGLVC-FATDTRIY 112
Query: 111 LWNPATRE 118
+ NPATR+
Sbjct: 113 VCNPATRQ 120
>29843.m000289 conserved hypothetical protein
Length = 393
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 5 EDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHL--NRSASSKTLIFCHYDYEX 62
ED++ IL R+PVK L+RFK V + WLSL P+F + H N + + L + E
Sbjct: 14 EDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISALFLRNSPLEF 73
Query: 63 XXXXXXXXXXXXLTPVILHKPSVLEGSDILGSCNNGLVCLYAP----SGSLYLWNPATRE 118
+ + G IL SCN L+C P + Y+ NP T++
Sbjct: 74 KFLSLSSSSSSSSSSASPLSFDLFHGIKILQSCNGLLLCSTLPKIGQKRNYYISNPTTKQ 133
>28962.m000442 conserved hypothetical protein
Length = 427
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 6 DIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRS-ASSKTLIFCHYDYEXXX 64
D++ +IL + + +++R +CV + W +L ++P FI QH + + ++ + IF + +
Sbjct: 8 DLLIEILIQCQIPTILRCRCVSKQWRALIDDPQFIKQHTDYAIQTNASRIFFNELFGNLC 67
Query: 65 XXXXXXXXXXLTPVILHKPSVLEGSDILGSCNNGLVCLY-APSGSLYLWNPATREYINTG 123
P+I S ++ ++GSC NGL+CL + + + NPATR+++
Sbjct: 68 SSPLDTLEIRNVPII----SQVQPVSLVGSC-NGLLCLRNVDTQDICIMNPATRKHMYLQ 122
Query: 124 YPIPDT 129
+P+
Sbjct: 123 NLLPNN 128
>29939.m000543 hypothetical protein
Length = 408
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 4 LEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQH 43
+ED+V +IL R+P K L+R KCV + WLSL +P+F H
Sbjct: 11 IEDLVIEILLRVPTKELLRCKCVSKQWLSLISDPHFCASH 50
>29844.m003355 hypothetical protein
Length = 421
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 2 NLLEDIVRDILSRIPVKSLMRFKCVQRSWLSLFENPNFITQHLNRSASSKTLIFCHYD 59
+L +DIV DIL+R+P+KSL+RF+CV + WL+ + F L R TL C ++
Sbjct: 10 HLPDDIVTDILTRLPLKSLVRFRCVSKPWLNFLTHSRFPYWLLFRHLHCDTLKDCPHN 67