Jatropha Genome Database

JcCA0301931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0301931.10 + phase: 0 
         (509 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29637.m000726 aromatic amino acid decarboxylase, putative             610   e-175
29950.m001181 aromatic amino acid decarboxylase, putative             514   e-146
28725.m000309 aromatic amino acid decarboxylase, putative             386   e-107
60499.m000013 aromatic amino acid decarboxylase, putative             322   2e-88
27544.m000014 aromatic amino acid decarboxylase, putative             206   2e-53
29439.m000226 hypothetical protein                                     91   2e-18

>29637.m000726 aromatic amino acid decarboxylase, putative
          Length = 492

 Score =  610 bits (1572), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 281/488 (57%), Positives = 370/488 (75%), Gaps = 14/488 (2%)

Query: 13  KHKTVNPLNADEFRRQGQMIIDFIADYYQNIEKYPVLSQVEPGYLQKRLPHSAPDNPESI 72
           +   + P++A++ R  G  ++DFIADYY+ IE +PVLSQVEPGYL+K LP SAP+ PES+
Sbjct: 3   REGELRPMDAEQLREHGHKMVDFIADYYKTIENFPVLSQVEPGYLRKLLPDSAPNQPESL 62

Query: 73  ETILQDVRKHILPGITHWQSPNYFAYFAASGSTASFLGEMLSTGFNIVGFNWLSSPAATE 132
           + +L DV+  ILPG+THWQSPNYFAY+ ++ S A FLGEMLS G N+VGF+W++SPAATE
Sbjct: 63  QNVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGINMVGFSWITSPAATE 122

Query: 133 LESIVMDWLGQVLQLPSCFLFSGSGGGVIQGTTCEAILCTLIAARDQMLRSIGKEKIGKL 192
           LE IV+DWLG++L+LP  FL +G GGGVIQGT  EA+L  L+AARD++LR +GK+ + KL
Sbjct: 123 LEMIVLDWLGKMLKLPEEFLSTGQGGGVIQGTASEAVLVALVAARDKVLRRVGKDALRKL 182

Query: 193 VVYASDQTHSALQKAAQIAGISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKGLIPLF 252
           VVY SDQTHSALQKA QI GI   N R ++T+ ST ++++PD L   I  DI  GLIP F
Sbjct: 183 VVYGSDQTHSALQKACQIGGIHPVNCRLLETDSSTNYALAPDLLSRAISEDISLGLIPFF 242

Query: 253 LCATIGTTSTTAVDPLRPLCDVAREFNIWIHVDAAYAGNACICPEFQHFLDGLEDANSFS 312
           LCAT+GTTS+TAVDPL  L  +A+   +W HVDAAYAG+AC+CPE++ ++DG+E+A+SF+
Sbjct: 243 LCATVGTTSSTAVDPLLALGKIAKSNGMWFHVDAAYAGSACVCPEYRCYMDGVEEADSFN 302

Query: 313 LNAHKWLLTNLDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVVDYKDWQIALSRRFR 372
           +NAHKW LTN DC  LWVKD NALI+SLST+PE+L+NK S +  VVDYKDWQI L RRFR
Sbjct: 303 MNAHKWFLTNFDCSALWVKDRNALIQSLSTSPEFLQNKPSQTNTVVDYKDWQIPLGRRFR 362

Query: 373 SLKLWLVLRSYGVRNLRTFLGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRIVPGAI 432
           SLKLW+VLR YGV  L+ ++  H+ +AK FEGL+ ED  FE+V P  FA+VCFR++P   
Sbjct: 363 SLKLWMVLRLYGVEKLQCYIRNHINLAKYFEGLIAEDTRFEVVSPPIFALVCFRLLP--- 419

Query: 433 EMGKDGVQMLPDREI-LANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDH 491
                     PD  +   N+L+  LL+++N++G IF++H ++ G Y +RFAVGA LTE+ 
Sbjct: 420 ----------PDNNVDHGNKLSHDLLDAVNSTGKIFISHTVLSGKYILRFAVGAPLTEER 469

Query: 492 HVIMAWKV 499
           HV  AWKV
Sbjct: 470 HVTAAWKV 477


>29950.m001181 aromatic amino acid decarboxylase, putative
          Length = 445

 Score =  514 bits (1325), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 240/408 (58%), Positives = 318/408 (77%), Gaps = 13/408 (3%)

Query: 92  SPNYFAYFAASGSTASFLGEMLSTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCF 151
           SPN+FAYF A+ S A FLGEML +G N+VGFNW+SSPAATELES+V+DW+G +++LPS F
Sbjct: 40  SPNFFAYFQANASNAGFLGEMLCSGLNVVGFNWISSPAATELESLVVDWMGNLMKLPSSF 99

Query: 152 LFSGSGGGVIQGTTCEAILCTLIAARDQMLRSIGKEKIGKLVVYASDQTHSALQKAAQIA 211
           LFSG+GGGV+ G+TCEAI+CTL+AARD+ L+ +G +KI KLVVYASDQTH+ LQK  +I 
Sbjct: 100 LFSGNGGGVLHGSTCEAIICTLVAARDRALKRLGWDKITKLVVYASDQTHATLQKGTRIV 159

Query: 212 GISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLRPL 271
           GI   N R++ T+ S+ FS+S  +L+  I++DI+ GL+P+FLCAT+GTT+  AVDP+  L
Sbjct: 160 GIPFSNIRSLPTSYSSGFSLSSRTLQEAIENDIKSGLVPIFLCATVGTTTCGAVDPIEEL 219

Query: 272 CDVAREFNIWIHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLWVK 331
             +A ++++W H+DAAYAG+ACICPEF+++L+G+E A+S S+N HKW LTN+DCCCLWVK
Sbjct: 220 GKIATKYDLWFHIDAAYAGSACICPEFRNYLNGVELADSISMNPHKWFLTNMDCCCLWVK 279

Query: 332 DPNALIKSLSTNPEYLKNKASDSAQVVDYKDWQIALSRRFRSLKLWLVLRSYGVRNLRTF 391
            P+ L+ SLST PEYL+N AS+S+ V+DYKDWQIALSRRFR++KLW+V+R +G+  L   
Sbjct: 280 QPDFLVDSLSTKPEYLRNTASESSAVIDYKDWQIALSRRFRAIKLWVVIRRHGLATLMHH 339

Query: 392 LGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRIVPGAIEMGKDGVQMLPDREILANE 451
           +   V MAK FE LV  DK FEIVVPR FA+VCFR+ P      KDG          ++E
Sbjct: 340 IRSDVNMAKRFESLVANDKRFEIVVPRKFALVCFRLKP------KDGANS-------SDE 386

Query: 452 LNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKV 499
           LNRRLL  +N SGC F+THG+ GG+YF+R A+G+TLTE+ HV   WK+
Sbjct: 387 LNRRLLAMVNQSGCAFLTHGVAGGIYFIRCAIGSTLTEERHVDDLWKL 434


>28725.m000309 aromatic amino acid decarboxylase, putative
          Length = 316

 Score =  386 bits (992), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 177/312 (56%), Positives = 230/312 (73%), Gaps = 10/312 (3%)

Query: 188 KIGKLVVYASDQTHSALQKAAQIAGISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKG 247
           K+  LVVYASDQTHS   KA ++AG++  N R + T+  T FS+SP +LR  IQ D+  G
Sbjct: 3   KLTALVVYASDQTHSTFSKACKLAGLNPSNIRLLPTSLDTAFSLSPSTLRKAIQDDVASG 62

Query: 248 LIPLFLCATIGTTSTTAVDPLRPLCDVAREFNIWIHVDAAYAGNACICPEFQHFLDGLED 307
           L+PL+LC T+GTTSTTA+DP+  L DVA E+++WIH+DAAY G+ACICPEF+ +LDG+E 
Sbjct: 63  LVPLYLCVTVGTTSTTAIDPVGQLADVANEYDMWIHIDAAYGGSACICPEFRGYLDGVER 122

Query: 308 ANSFSLNAHKWLLTNLDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVVDYKDWQIAL 367
            +S SL+ HKWLL+ LDCCCLWVK PN L+++LSTNPEYLKNK S+S  VVD+KDWQ+  
Sbjct: 123 VDSLSLSPHKWLLSYLDCCCLWVKSPNLLVQALSTNPEYLKNKQSESDSVVDFKDWQVGT 182

Query: 368 SRRFRSLKLWLVLRSYGVRNLRTFLGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRI 427
            RRF+SL+LWL+LRSYGV NL+  +   V+MAK+FEG V+ D  FEI+ PR FA+VCFR+
Sbjct: 183 GRRFKSLRLWLILRSYGVSNLQGHIRSDVQMAKIFEGFVKSDPRFEIMTPRTFALVCFRL 242

Query: 428 VPGAIEMGKDGVQMLPDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATL 487
            P     G    +M          +N +LLE +N+SG I+MTH  VGG Y +RFAVG TL
Sbjct: 243 KPTHKLDGSKHTEM----------MNGKLLEWVNSSGRIYMTHTKVGGEYLLRFAVGTTL 292

Query: 488 TEDHHVIMAWKV 499
           TE+ HV+ AWK+
Sbjct: 293 TEERHVVSAWKL 304


>60499.m000013 aromatic amino acid decarboxylase, putative
          Length = 239

 Score =  322 bits (826), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 150/239 (62%), Positives = 196/239 (82%)

Query: 31  MIIDFIADYYQNIEKYPVLSQVEPGYLQKRLPHSAPDNPESIETILQDVRKHILPGITHW 90
           M+IDFIA+YY+NIEKYPV SQV+PGYL  +LP SAP  PESIE IL+D+   I+PG+THW
Sbjct: 1   MVIDFIAEYYKNIEKYPVQSQVQPGYLSTKLPKSAPYCPESIEDILKDISDSIIPGLTHW 60

Query: 91  QSPNYFAYFAASGSTASFLGEMLSTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSC 150
           QSPN+FAYF  + S A FLGEML +G N+VGFNW+SSPAATELES+V+DW+G +++LPS 
Sbjct: 61  QSPNFFAYFQINASNAGFLGEMLCSGLNVVGFNWISSPAATELESLVVDWMGNLMKLPSS 120

Query: 151 FLFSGSGGGVIQGTTCEAILCTLIAARDQMLRSIGKEKIGKLVVYASDQTHSALQKAAQI 210
           FLFSG+GGGV+ G+TCEAI+CTL+AARD+ L+ +G +KI KLVVYASDQTH+ LQK  +I
Sbjct: 121 FLFSGNGGGVLHGSTCEAIICTLVAARDRALKRLGWDKITKLVVYASDQTHATLQKGTRI 180

Query: 211 AGISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLR 269
            GI   N R++ T+ S+ FS+S  +L+  I++DI+ GL+P+FLCAT+GTT+  AVDP+ 
Sbjct: 181 VGIPFSNIRSLPTSYSSGFSLSSRTLQEAIENDIKSGLVPIFLCATVGTTTCGAVDPIE 239


>27544.m000014 aromatic amino acid decarboxylase, putative
          Length = 174

 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 99/177 (55%), Positives = 126/177 (71%), Gaps = 13/177 (7%)

Query: 323 LDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVVDYKDWQIALSRRFRSLKLWLVLRS 382
           +DCCCLWVK P++L+ SLS  PEYL+N AS+S  V+DYKDWQIALSRRFR++KLW+V+R 
Sbjct: 1   MDCCCLWVKQPDSLVDSLSIEPEYLRNTASESGAVIDYKDWQIALSRRFRAIKLWVVIRR 60

Query: 383 YGVRNLRTFLGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRIVPGAIEMGKDGVQML 442
           +G+  L   +   V MAK FE LV  DK FEIVVPR FA+VCFR+ P      KDG    
Sbjct: 61  HGLATLMHHIRSDVNMAKRFESLVANDKRFEIVVPRKFALVCFRLKP------KDGANS- 113

Query: 443 PDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKV 499
                 ++ELNRRLL  +N SG  F+THG+ GG+YF+R A+G+TLTE+ HV   WK+
Sbjct: 114 ------SDELNRRLLAMVNQSGRAFLTHGVAGGIYFIRCAIGSTLTEERHVDDLWKL 164


>29439.m000226 hypothetical protein
          Length = 58

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/58 (68%), Positives = 51/58 (87%)

Query: 112 MLSTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLFSGSGGGVIQGTTCEAI 169
           MLS G NIVGFNW+SSPAATELES +++W+  +L+LPS FLFSG+GGGV+ G+TC+AI
Sbjct: 1   MLSLGLNIVGFNWISSPAATELESPIVNWMANLLKLPSSFLFSGNGGGVLHGSTCKAI 58