Jatropha Genome Database
- JcCA0301341.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0301341.20 - phase: 0 /TE/pseudo/partial
(108 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29970.m001031 conserved hypothetical protein 63 3e-11
28601.m000067 conserved hypothetical protein 62 6e-11
30162.m001269 nuclease, putative 57 1e-09
29826.m000758 hypothetical protein 55 8e-09
29739.m003666 conserved hypothetical protein 55 8e-09
29939.m000527 nucleic acid binding protein, putative 55 9e-09
30000.m000388 nuclease, putative 55 9e-09
30225.m001688 nucleic acid binding protein, putative 55 9e-09
29596.m000710 conserved hypothetical protein 54 1e-08
29904.m003025 hypothetical protein 54 1e-08
28320.m001075 nucleic acid binding protein, putative 54 2e-08
30205.m001571 hypothetical protein 54 2e-08
29641.m000379 nuclease, putative 51 1e-07
30010.m000679 nucleic acid binding protein, putative 51 1e-07
29869.m001168 conserved hypothetical protein 50 2e-07
48288.m000017 conserved hypothetical protein 50 2e-07
30174.m009074 nucleic acid binding protein, putative 50 3e-07
29702.m000169 nuclease, putative 49 5e-07
30190.m010851 conserved hypothetical protein 46 4e-06
28312.m000130 conserved hypothetical protein 45 6e-06
29822.m003334 hypothetical protein 45 7e-06
>29970.m001031 conserved hypothetical protein
Length = 132
Score = 62.8 bits (151), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYN-LVLNIQQQLRRSWE 60
A LWGL+ GL AW G+R LLV++D+ AV V S Y LV I+ L ++W+
Sbjct: 22 AGLWGLYHGLTLAWKLGIRKLLVKVDSMCAVPLVTGEKDISSSYAPLVSGIRSMLGQNWQ 81
Query: 61 VRLSHIYREANSCTDWLAHY 80
V +SH+YREAN D LA +
Sbjct: 82 VSVSHVYREANFAADGLASF 101
>28601.m000067 conserved hypothetical protein
Length = 307
Score = 62.0 bits (149), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNLVL-NIQQQLRRSWE 60
AELWG+ G+ AW+ G++ L++++DN + + S YNL++ NI+Q + R W+
Sbjct: 232 AELWGVHYGILMAWEIGIQQLIIKVDNKSVIKAIKGMSTNSYGYNLLINNIKQVMHRPWK 291
Query: 61 VRLSHIYREANSCTD 75
V ++H+Y+EAN D
Sbjct: 292 VIITHVYKEANRAAD 306
>30162.m001269 nuclease, putative
Length = 145
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNS-QAVWQVNQAIAPSPVYNLVLNIQQQLRRSWE 60
AELW G+ AW KG+ +L+VE+D+S A W +++ S NLV L+ W+
Sbjct: 48 AELWAFLQGISLAWSKGIHNLIVEVDSSLVADWMNKKSVCKSIHANLVSACLDLLQNWWD 107
Query: 61 VRLSHIYREANSCTDWLAH 79
V++ H++RE N D LA+
Sbjct: 108 VKIKHVFREMNQVADSLAN 126
>29826.m000758 hypothetical protein
Length = 98
Score = 55.1 bits (131), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 18 GVRDLLVELDNSQAVWQVNQAIAPSPVYNLVL--NIQQQLRRSWEVRLSHIYREANSCTD 75
G R LLVE+DN + + + AP+ + NL L ++ L R W+V+LSHIYREAN C D
Sbjct: 2 GFRKLLVEVDN-ECLVHILHNQAPATLRNLALFNEAKRLLSRDWDVQLSHIYREANGCAD 60
Query: 76 WLAHYG 81
A+ G
Sbjct: 61 KFANLG 66
>29739.m003666 conserved hypothetical protein
Length = 283
Score = 54.7 bits (130), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNS-QAVWQVNQAIAPSPVYNLVLNIQQQLRRSWE 60
AELW + GL AW+ G LLVE+D++ A W ++ N+VL L+R W
Sbjct: 161 AELWAVLQGLILAWNNGFHKLLVEVDSAIVADWLSSKNKCNGIHSNMVLACLDILKRDWS 220
Query: 61 VRLSHIYREANSCTDWLAH 79
+ HIYREAN D LA+
Sbjct: 221 ASIGHIYREANQVADCLAN 239
>29939.m000527 nucleic acid binding protein, putative
Length = 209
Score = 54.7 bits (130), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQV-NQAIAPSPVYNLVLNIQQQLRRSWE 60
ELWGL+ GL+ AW G+R + VE+DN + V + + S + L+ +I L R+W+
Sbjct: 94 TELWGLYQGLELAWKIGIRRIQVEVDNKRVVKLIYGHRVHASCLILLIASIHHLLSRNWQ 153
Query: 61 VRLSHIYREANSCTDWLA 78
V + H+Y +++ + LA
Sbjct: 154 VNIGHVYCKSSKVANCLA 171
>30000.m000388 nuclease, putative
Length = 219
Score = 54.7 bits (130), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 1 MAELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNL----VLNIQQQLR 56
+AEL+G+ GL AW+ G R++++E DN +V ++ + +L + +I++ L
Sbjct: 98 VAELFGILNGLNIAWNAGFRNIILETDNKTSVDKIYGDSDTKRMGDLEDLLITSIKEMLT 157
Query: 57 RSWEVRLSHIYREANSCTDWLAHY 80
+ W ++L H YRE N D LA++
Sbjct: 158 KEWNIKLQHQYREGNRVADALANF 181
>30225.m001688 nucleic acid binding protein, putative
Length = 119
Score = 54.7 bits (130), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYN--LVLNIQQQLRRSW 59
AEL G+ GL AW GV L VE+D S V Q+ + I YN L+ NI+Q L R W
Sbjct: 11 AELSGVHKGLALAWHYGVLKLKVEID-SLYVVQLLKGIKVVCNYNGLLISNIRQYLNREW 69
Query: 60 EVRLSHIYREAN 71
EV + HIYRE+N
Sbjct: 70 EVSIVHIYRESN 81
>29596.m000710 conserved hypothetical protein
Length = 90
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 15 WDKGVRDLLVELDNSQAVWQVNQAIAPSP-VYNLVLNIQQQLRRSWEVRLSHIYREANSC 73
W G + VELD+ ++Q I P L+L I + + R W++RL H++REAN C
Sbjct: 13 WIAGFSRICVELDSKAITDSLSQEIGDDPSCCILILAICKLISRPWQIRLRHVFREANQC 72
Query: 74 TDWLA 78
DWLA
Sbjct: 73 VDWLA 77
>29904.m003025 hypothetical protein
Length = 125
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNLVLNIQQQLRRSWEV 61
AE GL+ L AW G R + VE+D+S AV +++ V L + ++R W +
Sbjct: 17 AETLGLYSDLNLAWSLGFRGIQVEMDSSTAV----DSVSTKAVRGLPAAVGILVKRDWCI 72
Query: 62 RLSHIYREANSCTDWLA 78
R+ HI+REAN+C LA
Sbjct: 73 RVKHIFREANACAVGLA 89
>28320.m001075 nucleic acid binding protein, putative
Length = 101
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 1 MAELWGLFLGLQRAWDKGVRDLLVELDNS-QAVWQVNQAIAPSPVYNLVLNIQQQLRRSW 59
MAE W GL+ AW+ G R+L+VE+D+ A W + NL+ ++ +R+ W
Sbjct: 1 MAECWAACEGLKLAWNMGYRELIVEVDSKLVAGWLNADQTCMNDCSNLIYACRELIRKDW 60
Query: 60 EVRLSHIYREANSCTDWLAH 79
V + H++RE N D LA+
Sbjct: 61 NVDVRHVFREGNMIADSLAN 80
>30205.m001571 hypothetical protein
Length = 140
Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 10 GLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVY-NLVLNIQQQLRRSWEVRLSHIYR 68
GL+ AW G + +L+E+DN V +++ +APS Y +L I + L +W VR++H +R
Sbjct: 26 GLRLAWLSGHKQVLMEVDNQLVVDVLSEKVAPSRQYLSLHSEIVKMLGWNWIVRINHSFR 85
Query: 69 EANSCTDWLAHYGSTM 84
EAN C D LA+ G +
Sbjct: 86 EANRCADCLANTGHSF 101
>29641.m000379 nuclease, putative
Length = 177
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 1 MAELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNL----VLNIQQQLR 56
+AEL + GL+ AWD G +++++E DN +V + + +L + +I++ L
Sbjct: 56 VAELCSILNGLKIAWDAGFKNIILETDNKISVDTIYGDFDTKCIGDLEDLLITSIKEMLA 115
Query: 57 RSWEVRLSHIYREANSCTDWLAHY 80
+W V+L H YRE N + LA++
Sbjct: 116 MAWNVKLQHQYREGNQVAEALANF 139
>30010.m000679 nucleic acid binding protein, putative
Length = 122
Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 6 GLFLGLQRAWDKGVRDLLVELDNSQAVWQV--NQAIAPSPVYNLVLNIQQQLRRSWEVRL 63
G++ GL AW+ G+R LLVE D+S V + +AIA + +L+ +I+ L ++W+V++
Sbjct: 2 GVYKGLLMAWECGIRQLLVETDSSCHVALILGKEAIAGTHA-SLIRSIRGLLAQAWQVKV 60
Query: 64 SHIYREANSCTDWL 77
H+YRE N D +
Sbjct: 61 YHVYREGNFVADKM 74
>29869.m001168 conserved hypothetical protein
Length = 149
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAV-WQVNQAIAPSPVYNLVLNIQQQLRRSWE 60
AELW F GL AW+KG+R L++ +D++ A+ W ++I S + NLV + L +
Sbjct: 73 AELWAAFHGLTIAWNKGLRKLVLAMDSTLALYWLSKRSICNSHLSNLVHSCSAILSYELD 132
Query: 61 VRLSHIYREANS 72
+L H++RE +
Sbjct: 133 AKLVHVHREKGT 144
>48288.m000017 conserved hypothetical protein
Length = 120
Score = 50.1 bits (118), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 1 MAELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYN--LVLNIQQQLRRS 58
AEL G++ GL AW KG++ +++E N +N+A + N LV I++ + R
Sbjct: 40 FAELQGIYHGLCLAWSKGIKKVVLEAYNLSIKMVLNRA-KDGCIQNIALVKEIRKMITRE 98
Query: 59 WEVRLSHIYREANSCTDWLAH 79
W+++++HI +E N C + LA+
Sbjct: 99 WQIQVTHINQEGNKCANLLAN 119
>30174.m009074 nucleic acid binding protein, putative
Length = 244
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVN-QAIAPSPVYNLVLNIQQQLRRSWE 60
AEL GL GL+ A G L+VE DN V + + + Y L IQQ L++ WE
Sbjct: 130 AELLGLIEGLKLARKIGCEKLIVETDNEGVVQMIKIKTNRQNDNYILASEIQQLLQKGWE 189
Query: 61 VRLSHIYREANSCTDWLAHYG 81
V+ H + N C D LA+YG
Sbjct: 190 VQ--HCKNKQNRCADRLANYG 208
>29702.m000169 nuclease, putative
Length = 132
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 4 LWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNLVLNIQQQLRRSWEVRL 63
+WG + GL+ W+ G+R +++E+DN V Q++ I N LN+ + W V++
Sbjct: 27 MWGGWYGLKLGWEAGIRKVVLEVDNQLVVQQLSSDIYHR---NYSLNMIK-----WTVQV 78
Query: 64 SHIYREANSCTDWLAHYGSTM 84
+YRE N C D LA G +
Sbjct: 79 KDVYREGNQCVDALASIGRNV 99
>30190.m010851 conserved hypothetical protein
Length = 74
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQ-AIAPSPVYNLVLNIQQQLRRS 58
AELWGL+ GL AW+ ++ L+VE+DN+ V VN + P +LV NI++ L+R
Sbjct: 17 AELWGLYQGLLLAWELDIKQLVVEIDNASVVTMVNDMELVNGPNGSLVENIKRLLKRG 74
>28312.m000130 conserved hypothetical protein
Length = 107
Score = 45.1 bits (105), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 17 KGVRDLLVELDNSQAVWQVNQAIA-PSPVYNLVLNIQQQLRRSWEVRLSHIYREANSCTD 75
KG R + +ELD+ + V ++ ++ +L+ I+ + RSW+V +H+ +EAN C +
Sbjct: 41 KGFRRVDLELDSLEVVRAISADLSLIGNCGSLLAQIKTLMSRSWDVSCAHVLKEANKCAN 100
Query: 76 WLAH 79
WLAH
Sbjct: 101 WLAH 104
>29822.m003334 hypothetical protein
Length = 111
Score = 45.1 bits (105), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNLVLNIQQQLRRSWEV 61
AE WG+ GL AW +G R +++ D + + P + + L+I + L WEV
Sbjct: 40 AECWGVLYGLCLAWQRGFRCVILVWDMCLINMLKKKVVPPMRFWGIFLDILKMLELQWEV 99
Query: 62 RLSHIYREANSC 73
R++H+ + C
Sbjct: 100 RINHVRGSESFC 111