Jatropha Genome Database

JcCA0301151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0301151.10 - phase: 0 
         (423 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003588 starch synthase, putative                               361   e-100

>29842.m003588 starch synthase, putative
          Length = 1095

 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/282 (64%), Positives = 221/282 (78%), Gaps = 9/282 (3%)

Query: 2   SKPKGHAQKGFVPKVPAGTSTQKADSKKNGDKEGSITRTSSEILESKKKTLESEAHIEEE 61
           +K +G A +GF  K PAGTSTQK + + NGDKE S+T TSSEI+ + KKT E++ HI+EE
Sbjct: 4   AKSRGPAPEGFTLKTPAGTSTQKRNLQNNGDKEDSVTLTSSEIVGTNKKTPETKDHIDEE 63

Query: 62  QTFQRIEDKTVNKEKLTGEASSTSEKVSVAKIDQAEQNGNAASVENITVPTDEISIVEKQ 121
           Q F+   DK V +EK+T +       +S+AK +QA +NG+  +V N+ +  DEI+  E+Q
Sbjct: 64  QEFELTVDKKVIEEKVTEDVP-----LSLAKSNQAMENGSVGNVGNVNMSADEIAREERQ 118

Query: 122 FDNLKSDTIVKEESTDVNEKTNENA---LRLEMEENQQKQEIEGLAEDNITMGNKFFVYP 178
           FDNLKSD  VKEE    ++K  E+    L+LEMEE ++KQEIEGLAE + + GNK F+YP
Sbjct: 119 FDNLKSDRFVKEEGFGTDDKEIEDTSLKLKLEMEE-KRKQEIEGLAEYSFSRGNKLFIYP 177

Query: 179 QAVKPDQDIELYLNRSLSTLNNEPDVFIMGAFNDWRWKSFTMKLNKTHLKGDWWSCQIHV 238
             VKPDQDIE+YLNRSLSTLNNEPDVFIMGAFNDWRWKSFT++LNKTHLKGDWWSCQ+HV
Sbjct: 178 LVVKPDQDIEVYLNRSLSTLNNEPDVFIMGAFNDWRWKSFTIRLNKTHLKGDWWSCQVHV 237

Query: 239 PKEAYKMDFVFFNGKNVYDNNDKKDFCIPVEGGMDALAFEDF 280
           PKEAYKMDFVFFNGKNVYDNNDKKDFC  VEGGMDAL F+DF
Sbjct: 238 PKEAYKMDFVFFNGKNVYDNNDKKDFCTAVEGGMDALTFDDF 279



 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 64/94 (68%), Positives = 78/94 (82%)

Query: 324 KVETEKRREILHRLIKSAARSVDNVWYIEPSEFKGEDLVCIYYNKSSGPLAQANELWIHG 383
           KVE EKRREILH+ +K A+  +DNVWYI P+EFKGEDLV +YYNKSSGPLA A ++WIHG
Sbjct: 352 KVEIEKRREILHQSMKKASSPIDNVWYIRPTEFKGEDLVRLYYNKSSGPLAHAKDIWIHG 411

Query: 384 GYNNWNGGLTIVQKLVSSERKDGDWWYANGMCGD 417
           G NNW+ GL+IV+KL+ SERKDG+WWYA  +  D
Sbjct: 412 GCNNWSDGLSIVEKLICSERKDGEWWYAKVLVPD 445



 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 108/261 (41%), Gaps = 31/261 (11%)

Query: 153 ENQQKQEI--EGLAEDNITMGNKFFVYPQAVKPDQDIELYLNRSLSTLNNEPDVFIMGAF 210
           E ++++EI  + + + +  + N +++ P   K +  + LY N+S   L +  D++I G  
Sbjct: 354 EIEKRREILHQSMKKASSPIDNVWYIRPTEFKGEDLVRLYYNKSSGPLAHAKDIWIHGGC 413

Query: 211 NDWR-WKSFTMKLNKTHLK-GDWWSCQIHVPKEAYKMDFVFFNGKN----VYDNNDKKDF 264
           N+W    S   KL  +  K G+WW  ++ VP  A  +D+VF +G      VYDNN ++DF
Sbjct: 414 NNWSDGLSIVEKLICSERKDGEWWYAKVLVPDRAIILDWVFADGPPQSAIVYDNNQRQDF 473

Query: 265 CIPVEGGMDALAFEDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 324
              V   +    F                                               
Sbjct: 474 HAIVPKSVPTELF---------------WVEEEHRIYRKLQEERRLREEAIRAKAEKTAH 518

Query: 325 VETEKRREILHRLIKSAARSVDNVWYIEPSEFKGEDLVCIYYNKSSGPLAQANELWIHGG 384
           ++ E++   L R + S    V    Y +P + +      ++YN ++  L   +E+W  G 
Sbjct: 519 MKAERKERTLKRFLLSQKHIV----YTDPLDVQAGKDATVFYNPANTVLNGKSEVWFRGS 574

Query: 385 YNNW---NGGLTIVQKLVSSE 402
           +N W   NG L  + K+VS++
Sbjct: 575 FNRWTHRNGPLPPL-KMVSAD 594



 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 17/144 (11%)

Query: 141 KTNENALRLEMEEN-QQKQEIEGLAEDNITMGNKFFVY--PQAVKPDQDIELYLNRSLST 197
           +  E A+R + E+    K E +        +  K  VY  P  V+  +D  ++ N + + 
Sbjct: 503 RLREEAIRAKAEKTAHMKAERKERTLKRFLLSQKHIVYTDPLDVQAGKDATVFYNPANTV 562

Query: 198 LNNEPDVFIMGAFNDWRWKSFTMKL-------NKTHLKGDWWSCQIHVPKEAYKMDFVFF 250
           LN + +V+  G+FN W  ++  +         N +H+K       + VP +AY MDFVF 
Sbjct: 563 LNGKSEVWFRGSFNRWTHRNGPLPPLKMVSADNGSHVKA-----TVKVPLDAYMMDFVFS 617

Query: 251 NGK--NVYDNNDKKDFCIPVEGGM 272
             +    +DN D  D+ +PV GG+
Sbjct: 618 EKEEGGTFDNKDGVDYHVPVFGGI 641