Jatropha Genome Database

JcCA0299871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0299871.10 - phase: 0 /partial
         (278 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014232 Nitric-oxide synthase, putative                         474   e-134
28470.m000432 conserved hypothetical protein                           78   4e-15

>30147.m014232 Nitric-oxide synthase, putative
          Length = 567

 Score =  474 bits (1221), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/280 (82%), Positives = 249/280 (88%), Gaps = 7/280 (2%)

Query: 1   GSANVGKSAFINASLKMMAQRDPXXXXXRKYKPVQSAVPGTTLGPIQIDAFLGGGKIFDT 60
           GSANVGKSAFINA LKMMAQRDP     RKY+P+QSAVPGTTLG IQIDAFLGGGK+FDT
Sbjct: 293 GSANVGKSAFINALLKMMAQRDPAAAAARKYRPIQSAVPGTTLGSIQIDAFLGGGKLFDT 352

Query: 61  PGVHLHHRQAAVVHSEDLPILAPRSRLRGQSFPNAKLASENGVANKFESNGLNGFSIFWG 120
           PGVHLHHRQAAVV SEDLPILAPRSRLRGQSFP   L +     +KFESNGLNGFSIFWG
Sbjct: 353 PGVHLHHRQAAVVQSEDLPILAPRSRLRGQSFPVCSLQT-----DKFESNGLNGFSIFWG 407

Query: 121 GLVRIDILKVLPETSLTFYGPKALQIHIVPTDQADEFYL--EELGVLLTPPTGKERAEDW 178
           GLVRID+LKVLPETSLTFYGPKALQ HIVPTD+ADEFY   +ELGVLLTPPTG E A+DW
Sbjct: 408 GLVRIDVLKVLPETSLTFYGPKALQFHIVPTDEADEFYQASKELGVLLTPPTGIEGAKDW 467

Query: 179 KGLEIVRQLQIKFEDAERPASDIAISGLGWIAIEPASKSLRRPDMNLGEIAKELHLAVHV 238
           KGL I+RQLQIKFEDAERPASD+AISGLGWIA+EP SKS R+P +NL E AKELHLAVHV
Sbjct: 468 KGLGIIRQLQIKFEDAERPASDVAISGLGWIAVEPVSKSRRKPVLNLEETAKELHLAVHV 527

Query: 239 PKPVEIFVRPPLPVGKYGAEWYQYRELTEKEEELRPRWNF 278
           P PVEIFVRPPLPVGK G+EWYQYRELTEKEEE+RP+W+F
Sbjct: 528 PNPVEIFVRPPLPVGKSGSEWYQYRELTEKEEEIRPKWHF 567


>28470.m000432 conserved hypothetical protein
          Length = 697

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 28/213 (13%)

Query: 1   GSANVGKSAFINASLKMMAQRDPXXXXXRKYKPVQSAVPGTTLGPIQIDAFLGG-GKIFD 59
           G+ N GKS  INA  K            +  K  ++ VPGTTLG ++I   L    K++D
Sbjct: 437 GAQNAGKSTLINAFAK--------KEGAKISKLTEAPVPGTTLGILRIGGILSAKAKMYD 488

Query: 60  TPGVHLHHRQAAVVHSEDLPILAPRSRLRGQSFPNAKLASENGVANKFESNGLNGFSIFW 119
           TPG+   +  +  ++ E+  ++  R  L+ +++  AK+                G ++  
Sbjct: 489 TPGLLHPYLMSMRLNREEQKMVEIRKELQARTY-RAKV----------------GQAVHV 531

Query: 120 GGLVRIDILKVLPET-SLTFYGPKALQIHIVPTDQADEFYLEELGVLLTPPTGKERAEDW 178
           GGL+R+D+ +   ET  +T +   ++ +H+   + A++F+    GV L PP G++RA + 
Sbjct: 532 GGLLRLDLNQASVETIYITVWASPSVSLHLGKMENANDFWKNHAGVRLQPPVGEDRASEL 591

Query: 179 KGLEIVRQLQIKFEDAERPASDIAISGLGWIAI 211
              E  R++++     +    DIAI+GLGW ++
Sbjct: 592 GEWE-EREIKVTGTSWDVNHIDIAIAGLGWFSL 623