Jatropha Genome Database

JcCA0299751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0299751.20 + phase: 0 /partial
         (244 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001441 undecaprenyl diphosphate synthase, putative             318   1e-87
28565.m000330 undecaprenyl diphosphate synthase, putative             278   2e-75
28565.m000331 undecaprenyl diphosphate synthase, putative             269   8e-73
28565.m000328 undecaprenyl diphosphate synthase, putative             248   2e-66
29681.m001337 undecaprenyl pyrophosphate synthetase, putative          91   7e-19

>29830.m001441 undecaprenyl diphosphate synthase, putative
          Length = 381

 Score =  318 bits (815), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 171/240 (71%), Positives = 194/240 (80%), Gaps = 16/240 (6%)

Query: 6   MTKHS-SRVSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHR 64
           M K+S SRV+ELF +L   +RIC+FRILS+GPIP+H AFIMDGNRRYAKK N+K GAGHR
Sbjct: 1   MMKNSVSRVTELFCSLVSFMRICMFRILSVGPIPNHIAFIMDGNRRYAKKENMKEGAGHR 60

Query: 65  AGFESLISILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAK 124
           AGF +LISILKYCYELGVKYVT+YAFSIDNFKRRPDEV+DLMDLMLEKI+ELLKEES+  
Sbjct: 61  AGFSALISILKYCYELGVKYVTVYAFSIDNFKRRPDEVQDLMDLMLEKIEELLKEESIVN 120

Query: 125 QYGIRVYFIGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKN 184
           QYGIRVYFIGNL LL+E VRIAAEKVMRATANNTKCT LIC+AYTS DEI+HAVQ+SCK 
Sbjct: 121 QYGIRVYFIGNLTLLNEPVRIAAEKVMRATANNTKCTFLICIAYTSCDEIVHAVQESCKF 180

Query: 185 KWEEIQPLSFWKATNGGIQEIDDCKKMNGVTPHGFQEFQKDEVDESQATAASANCSGLIR 244
           K +E QPL+F + +N GI               GFQE QKDE D+SQ   AS   +GL R
Sbjct: 181 KRQEFQPLTFSQHSNDGI---------------GFQETQKDEFDKSQEIKASKTSNGLTR 225


>28565.m000330 undecaprenyl diphosphate synthase, putative
          Length = 370

 Score =  278 bits (710), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 138/234 (58%), Positives = 179/234 (76%), Gaps = 6/234 (2%)

Query: 9   HSSRVSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFE 68
           ++SR+++LFG+L   +R  +FR+L  GPIPSH + IMDGNRR+ KK NLK GAG+RAGF 
Sbjct: 5   NNSRMNKLFGHLASFMRRSIFRVLCNGPIPSHLSVIMDGNRRFTKKENLKPGAGYRAGFS 64

Query: 69  SLISILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGI 128
           +L+S+LKYCYELGVKYVTI+AF IDNFKRR DEV+ +MDLMLEK   +LKEES+  QYG+
Sbjct: 65  ALMSMLKYCYELGVKYVTIFAFGIDNFKRRSDEVQVIMDLMLEKTLGMLKEESIVHQYGV 124

Query: 129 RVYFIGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNKWEE 188
           RVYFIGNLKLL E +R+AAEKVMR T+NNTK  LLIC+AY+S DEI HAVQ+SC+ KW+E
Sbjct: 125 RVYFIGNLKLLDEPLRVAAEKVMRTTSNNTKFVLLICVAYSSTDEIAHAVQESCQEKWKE 184

Query: 189 IQPLSFWKATNGGIQEIDDCKKMNGVTPHGFQEFQKDEVDESQATAASANCSGL 242
           I+  +  K +N  ++ ++  K +N       +EF K+E DE QA  AS+   G+
Sbjct: 185 IEHSNSDKVSNDLVK-VEAGKNINNA-----REFCKEEADELQAGKASSESDGV 232


>28565.m000331 undecaprenyl diphosphate synthase, putative
          Length = 363

 Score =  269 bits (688), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 132/232 (56%), Positives = 172/232 (74%), Gaps = 1/232 (0%)

Query: 13  VSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLIS 72
           +++L G L   +R  +F +L MGPIPSH +FIMDGNRR+ KK NLK GAG+RAGF +L+S
Sbjct: 1   MNQLLGRLASFMRQSIFHVLRMGPIPSHLSFIMDGNRRFTKKENLKPGAGYRAGFLALMS 60

Query: 73  ILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYF 132
           +LKYCYELGVK+VTI+AF IDNFKRRPDEV+ +MDL+LEK   LLKEES+  QYGIRV+F
Sbjct: 61  MLKYCYELGVKHVTIFAFGIDNFKRRPDEVRFIMDLILEKTLGLLKEESIVHQYGIRVHF 120

Query: 133 IGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNKWEEIQPL 192
           IGNLKLL E +R+AAEKV R T++NTK  LLIC+AY+S +EI HAVQ  CK KW EI+P 
Sbjct: 121 IGNLKLLDEPLRVAAEKVTRTTSSNTKFVLLICVAYSSTNEITHAVQQYCKEKWNEIEPS 180

Query: 193 SFWKATNGGIQEIDDCKKMNGVTPHGFQEFQKDEVDESQATAASANCSGLIR 244
           ++ K +N  ++ ++  K ++     G  E  K+E DE QA  A    +G+ +
Sbjct: 181 NYDKVSNDLVK-VEVGKNIDNAIMCGAGESCKEEADELQAAKAKPESNGVTK 231


>28565.m000328 undecaprenyl diphosphate synthase, putative
          Length = 331

 Score =  248 bits (633), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 114/178 (64%), Positives = 146/178 (82%)

Query: 13  VSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLIS 72
           ++ +F   G L+  C+F +LSMGPIP H +F+MDGNRR+AKK NL+ GAGH+AG  +LI+
Sbjct: 1   MNSMFECSGSLITRCIFGVLSMGPIPGHLSFLMDGNRRFAKKENLETGAGHKAGSSALIT 60

Query: 73  ILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYF 132
           ILKYCY+L VKYVT+YAFSI+NF R P EV+ +MDLMLE  + LLKEES+  Q+GIRV+F
Sbjct: 61  ILKYCYDLRVKYVTVYAFSIENFNRPPHEVQTVMDLMLETTEGLLKEESVVHQHGIRVHF 120

Query: 133 IGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNKWEEIQ 190
           IGNLKLL + +R+AAEKVMRAT+ NTK  LLIC+AY+S DEI+HAVQ+SCK KW +I+
Sbjct: 121 IGNLKLLDKPLRVAAEKVMRATSKNTKYVLLICVAYSSSDEIIHAVQESCKEKWNKIE 178


>29681.m001337 undecaprenyl pyrophosphate synthetase, putative
          Length = 310

 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 15/152 (9%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H A IMDGN R+AK+       GH AG  SL+ I+  C   G+K +T++AFS +N+ 
Sbjct: 78  MPRHVAVIMDGNGRWAKQQGWPPSKGHEAGVRSLMEIMNLCGHWGIKVLTVFAFSCENWT 137

Query: 97  RRPDEVKDLMDL----MLEKIDELLKEESMAKQYGIRVYFIGNLKLLSENVRIAAEKVMR 152
           R   E+  LM L    +  +++ LL+E       GIRV  IG++  L E+++    +V  
Sbjct: 138 RPKVEIDFLMSLFERVLKSELENLLRE-------GIRVSIIGDVSKLPESLQRLIREVED 190

Query: 153 ATANNTKCTLLICLAYTSRDEILHAVQDSCKN 184
            T + +K  LL+ ++Y+ + +++ A    C+N
Sbjct: 191 TTKDYSKLHLLVAVSYSGKYDVVKA----CRN 218