Jatropha Genome Database

JcCA0297521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0297521.10 + phase: 0 /partial
         (342 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative             453   e-128
29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative             160   9e-40
30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative             156   1e-38
29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative             136   2e-32
29864.m001501 9-cis-epoxycarotenoid dioxygenase, putative             120   7e-28

>29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 618

 Score =  453 bits (1166), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/334 (69%), Positives = 250/334 (74%), Gaps = 17/334 (5%)

Query: 26  KGNQMDAFSSSFLSTVPPSKLFLTHKT--------TPTSFPLPLLNVSSVRIEEKPQXXX 77
           KG+ MDAFSS+FLSTV PSKLFL+  T          T  P PL  VSSVRIE+KPQ   
Sbjct: 5   KGSNMDAFSSTFLSTVHPSKLFLSPTTNLLNSPVRASTLLPFPLFTVSSVRIEDKPQATT 64

Query: 78  XXXXXXXXXXXXXXXXX---------XXXINISAATAKRRVEPSLPTMVFNAFDGIINNF 128
                                         N + A AKRRVEP+LPT++F+AFD IIN F
Sbjct: 65  TRPTTTIKSPSTSSSPITTATKSPPPSTMKNSAVAGAKRRVEPNLPTLMFSAFDDIINKF 124

Query: 129 IDPPLKPGVDPGHVLSDNFAPVDELPPTDCEVIEGSLPSCLDGAYIRNGPNPQYLPKGPY 188
           IDPP++P VDP ++LSDNFAPVDELPPT+CEV+EGSL SCLDGAYIRNGPNPQYLP+GPY
Sbjct: 125 IDPPMRPSVDPRYILSDNFAPVDELPPTECEVVEGSLLSCLDGAYIRNGPNPQYLPRGPY 184

Query: 189 HLFDGDGMLHSIRISQGKAKLCSRYVKTYKYIKERDAGAPLLPNVFSGFNXXXXXXXXXX 248
           HLFDGDGMLHSIRISQGKA LCSRYVKTYKY  ERDAGAPLLPNVFSGFN          
Sbjct: 185 HLFDGDGMLHSIRISQGKATLCSRYVKTYKYTMERDAGAPLLPNVFSGFNGLAASATRGA 244

Query: 249 XXXXXILSGQFNPANGIGLANTSLAFFGNRLYALGESDLPYVVRLTPNGDIETVGRHDFD 308
                ILSGQFNP NGIGLANTSLAFFGNRLYALGESDLPY VRLT NGDIET+GRHDF+
Sbjct: 245 LSAARILSGQFNPVNGIGLANTSLAFFGNRLYALGESDLPYTVRLTLNGDIETLGRHDFE 304

Query: 309 GKLFFSMTAHPKIDLETGETFAFRYAPIPPFLTY 342
           GKLF SMTAHPKIDLETGE FAFRY P+PPFLTY
Sbjct: 305 GKLFMSMTAHPKIDLETGEAFAFRYGPVPPFLTY 338


>29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 607

 Score =  160 bits (405), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 2/206 (0%)

Query: 138 DPGHVLSDNFAPVDELPPTDCEVIEGSLPSCLDGAYIRNGPNPQYLPKGPYHLFDGDGML 197
           DP   +S N+APV E P      + G++P C++G Y+RNG NP + P   +HLFDGDGM+
Sbjct: 126 DPRVQISGNYAPVPEQPVRQSLPVTGTIPDCINGVYVRNGANPLFEPIAGHHLFDGDGMV 185

Query: 198 HSIRISQGKAKLCSRYVKTYKYIKERDAGAPLLPNVFSGFNXXXXXXXXXXXXXXXILSG 257
           H++ I  G A    R+ +T +  +ER  G P+ P      +                L G
Sbjct: 186 HAVSIKNGNASYACRFTETERLKQERVLGRPVFPKAIGELHGHSGIARLLLFYARG-LCG 244

Query: 258 QFNPANGIGLANTSLAFFGNRLYALGESDLPYVVRLTPNGDIETVGRHDFDGKLFFSMTA 317
             +   G G+AN  L +F +RL A+ E D+PY VR+T +GD+ETVGR++F+G+L  +M A
Sbjct: 245 LIDHTKGTGVANAGLVYFNDRLLAMSEDDVPYQVRVTFSGDLETVGRYNFEGQLEHTMIA 304

Query: 318 HPKIDLETGETFAFRYAPI-PPFLTY 342
           HPKID  + E FA  Y  I  P+L Y
Sbjct: 305 HPKIDPVSKEMFALSYDVIQKPYLKY 330


>30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 603

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 127/231 (54%), Gaps = 4/231 (1%)

Query: 115 TMVFNAFD-GIINNFIDPPLKPGVDPGHVLSDNFAPVDELPPTDCEVIEGSLPSCLDGAY 173
           +M  +A +  ++++    PL    DP   +  NFAPV E        + G +P  + G Y
Sbjct: 98  SMALDAVESALVSHERKHPLPKTADPVVQICGNFAPVPEQSVVHSLPVAGKIPDSIHGVY 157

Query: 174 IRNGPNPQYLPKGPYHLFDGDGMLHSIRISQG-KAKLCSRYVKTYKYIKERDAGAPLLPN 232
           IRNG NP + P   +H FDGDGM+H+++  +G       R+ +T ++++ER+ G P+ P 
Sbjct: 158 IRNGANPLHEPVAGHHFFDGDGMVHAVQFEKGGSVSYACRFTETNRFVQERELGRPVFPK 217

Query: 233 VFSGFNXXXXXXXXXXXXXXXILSGQFNPANGIGLANTSLAFFGNRLYALGESDLPYVVR 292
                +               ++ G  +P++G G+AN  L +F  RL A+ E DLPY VR
Sbjct: 218 AIGELHGHSGIARLLLFYARGLV-GLVDPSHGTGVANAGLVYFNGRLLAMSEDDLPYHVR 276

Query: 293 LTPNGDIETVGRHDFDGKLFFSMTAHPKIDLETGETFAFRYAPI-PPFLTY 342
           + P+GD++TV R+DFD +L  +M AHPK+D  +GE FA  Y  +  PFL Y
Sbjct: 277 VLPSGDLKTVARYDFDAQLKSTMIAHPKVDPVSGELFALSYDVVQKPFLKY 327


>29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 618

 Score =  136 bits (342), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 110/208 (52%), Gaps = 3/208 (1%)

Query: 137 VDPGHVLSDNFAPVDELPPTDCEVIEGSLPSCLDGAYIRNGPNPQYLPKGPYHLFDGDGM 196
           +DP   +S NFAPV E P      + G +P+ L G Y+RNG NP Y P G +HLFDGDGM
Sbjct: 115 IDPTVQISGNFAPVLECPVHHGLEVVGHIPNSLRGVYLRNGANPVYAPTGGHHLFDGDGM 174

Query: 197 LHSIRIS-QGKAKLCSRYVKTYKYIKERDAGAPLLPNVFSGFNXXXXXXXXXXXXXXXIL 255
           +H++ +  + +A    R+ +T +  +E   G  + P      +                +
Sbjct: 175 VHAVTLGYENRASYSCRFTRTSRLEQEAALGRSVFPKPIGELHGHLGFARLLIFMVRAGI 234

Query: 256 SGQFNPANGIGLANTSLAFFGNRLYALGESDLPYVVRLTPNGDIETVGRHDFDGKLFFSM 315
            G  + + G G+AN  L +F  RL A+ E DLPY V++  +GD+ET+ R  FD +L   M
Sbjct: 235 -GLVDGSRGTGVANAGLVYFNGRLLAMSEDDLPYHVKIKGDGDLETIKRFSFDDQLDCPM 293

Query: 316 TAHPKIDLETGETFAFRYAPI-PPFLTY 342
            AHPK+D  TGE  A  Y  +  P+L Y
Sbjct: 294 IAHPKVDPVTGELHALSYNVVQKPYLKY 321


>29864.m001501 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 536

 Score =  120 bits (302), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 114/232 (49%), Gaps = 18/232 (7%)

Query: 113 LPTMVFNAFDGIINNFIDPPLKPGVDPGHVLSDNFAPVDELPPTDCEVIEGSLPSCLDGA 172
           L + V +  + +I   +  P +P     H LS NFAPVDE PP     ++G LP C++G 
Sbjct: 26  LTSKVIDFLEKLIVKLMHDPSQPL----HYLSGNFAPVDETPPVTDLPVKGHLPECMNGE 81

Query: 173 YIRNGPNPQYLPKGPYHLFDGDGMLHSIRISQGKAKLCSRYVKTYKYIKERDAGAPLLPN 232
           ++R GPNP++ P   YH      M+H +RI  GKA    RYVKT +  +E   G      
Sbjct: 82  FVRVGPNPKFSPVAGYHC-----MIHGMRIKNGKATYVRRYVKTSRLKQEEFFGGSKFMK 136

Query: 233 V--FSGFNXXXXXXXXXXXXXXXILSGQFNPANGIGLANTSLAFFGNRLYALGESDLPYV 290
           +    G                 +    F+ + G+G  N       +  ++L  +D   V
Sbjct: 137 IGDLRGLFGLLMVNMQMLRAKMKV----FDMSYGMGTGNFVDGNKSSPYWSLHSAD---V 189

Query: 291 VRLTPNGDIETVGRHDFDGKLFFSMTAHPKIDLETGETFAFRYAPIPPFLTY 342
           V++  +GD++TVG  D+D +L  S TAHPK+D  TGE F F Y    P++TY
Sbjct: 190 VKVMEDGDLQTVGLLDYDKRLKHSFTAHPKVDPFTGEMFTFGYGHEKPYITY 241