Jatropha Genome Database

JcCA0297261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0297261.10 + phase: 0 /partial
         (72 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013899 Stachyose synthase precursor, putative                   92   5e-20
29933.m001398 Stachyose synthase precursor, putative                   86   5e-18

>30147.m013899 Stachyose synthase precursor, putative
          Length = 778

 Score = 92.0 bits (227), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/64 (60%), Positives = 52/64 (81%)

Query: 1   MLNSGGAIQSLDIDDDKNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVVIQ 60
           MLNSGGAIQSLD ++ ++ V+I VKG GEM++FASE+P  C++DG  V+F YDD ++ IQ
Sbjct: 705 MLNSGGAIQSLDYEESESRVKIEVKGSGEMRMFASEEPRTCRIDGAGVEFCYDDYMISIQ 764

Query: 61  VPWP 64
           VPWP
Sbjct: 765 VPWP 768


>29933.m001398 Stachyose synthase precursor, putative
          Length = 787

 Score = 85.5 bits (210), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 3/74 (4%)

Query: 1   MLNSGGAIQSLDIDDDKNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVVIQ 60
           MLN+GGA+QSL  + D + + IGV+G GEM+VFASEKP AC++DG +V+F Y++ +VV++
Sbjct: 711 MLNTGGAMQSLSYNADSS-IEIGVRGEGEMRVFASEKPRACRIDGKEVEFEYEECMVVVE 769

Query: 61  VPWP--NSSRLSAI 72
           VPW   NSS +S +
Sbjct: 770 VPWSTTNSSGVSNV 783