Jatropha Genome Database

JcCA0297121.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0297121.20 - phase: 2 /partial
         (97 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29724.m000833 fumarylacetoacetate hydrolase, putative                 126   3e-30

>29724.m000833 fumarylacetoacetate hydrolase, putative
          Length = 421

 Score =  126 bits (316), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/63 (95%), Positives = 60/63 (95%)

Query: 1   TINGCNLRPGDLLGTGTISGPEPESYGCLLELTWNGQKPLSLNGATRKFLEDGDEVIFSG 60
           TINGCNLRPGDLLGTGTISGPEPESYGCLLELTWNGQKPLSLNG  RKFLEDGDEVIFSG
Sbjct: 338 TINGCNLRPGDLLGTGTISGPEPESYGCLLELTWNGQKPLSLNGTERKFLEDGDEVIFSG 397

Query: 61  FSK 63
            SK
Sbjct: 398 CSK 400