Jatropha Genome Database

JcCA0296741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0296741.10 + phase: 0 
         (122 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002287 Bud site selection protein, putative                    168   5e-43

>30078.m002287 Bud site selection protein, putative
          Length = 90

 Score =  168 bits (426), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 76/87 (87%), Positives = 84/87 (96%)

Query: 36  VYEELQKPDVEKKSLPLDEDLPGMGQYYCLHCDRYFANVTVRDEHFKTKRHRKRLKQMMG 95
           VY+EL+KPD EKKSLPLDEDLPGMGQYYCLHCDRYFANVT+RD+HFK+KRH+KR+KQM G
Sbjct: 2   VYDELKKPDSEKKSLPLDEDLPGMGQYYCLHCDRYFANVTIRDDHFKSKRHKKRVKQMSG 61

Query: 96  PAPHTQLDADLAGGMGMPDNGPKLMSM 122
           PAPHTQLDADLA GMGMPDNGPKLMS+
Sbjct: 62  PAPHTQLDADLAAGMGMPDNGPKLMSL 88