Jatropha Genome Database

JcCA0295991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0295991.10 - phase: 0 /partial
         (165 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28124.m000244 Chorismate mutase, chloroplast precursor, putative      181   2e-46
30174.m009156 Chorismate mutase, chloroplast precursor, putative      129   5e-31
29848.m004541 chorismate mutase cm2, putative                          58   2e-09

>28124.m000244 Chorismate mutase, chloroplast precursor, putative
          Length = 321

 Score =  181 bits (458), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 97/122 (79%)

Query: 44  TSFANRRILSVEASASSIGLEKKKRVDESENLTLEHIRRSLIRQEDSIIFSLLERSQYCY 103
           ++   R +LSV+ASASSIGL KKKRVDESENLTLE+IRRSLIRQEDSIIFSLLERSQYCY
Sbjct: 42  SALTKRCMLSVQASASSIGLTKKKRVDESENLTLENIRRSLIRQEDSIIFSLLERSQYCY 101

Query: 104 NADTYDPDAFSMDGFHGSLVEYMLREIEKLHAQVGRYKSXXXXXXXXXXXXXXXXXXXQY 163
           NADTYDPDAF+MDGFHGSLVE+MLRE EKLHAQVGRYKS                   QY
Sbjct: 102 NADTYDPDAFAMDGFHGSLVEFMLRETEKLHAQVGRYKSPDELPFFPDDLPEPLLPPLQY 161

Query: 164 PQ 165
           PQ
Sbjct: 162 PQ 163


>30174.m009156 Chorismate mutase, chloroplast precursor, putative
          Length = 358

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/93 (69%), Positives = 78/93 (83%)

Query: 50  RILSVEASASSIGLEKKKRVDESENLTLEHIRRSLIRQEDSIIFSLLERSQYCYNADTYD 109
           R   ++AS+S      K RVDES++L+LE IR SLIRQEDSII SLL R+QYCYNADTYD
Sbjct: 86  RYCHLQASSSVPIRYLKDRVDESQSLSLESIRHSLIRQEDSIIRSLLLRAQYCYNADTYD 145

Query: 110 PDAFSMDGFHGSLVEYMLREIEKLHAQVGRYKS 142
           PDAFSM+GF+GSLVE+++RE EKLHA+VGRYKS
Sbjct: 146 PDAFSMEGFNGSLVEFIVRETEKLHARVGRYKS 178


>29848.m004541 chorismate mutase cm2, putative
          Length = 253

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 47/73 (64%)

Query: 70  DESENLTLEHIRRSLIRQEDSIIFSLLERSQYCYNADTYDPDAFSMDGFHGSLVEYMLRE 129
           D      L+ +R+SL RQED+I+F L+ERS++  N+  Y  +   + GF GSLV ++++E
Sbjct: 3   DSGTAFNLDLVRQSLERQEDTIVFCLIERSRFPSNSPLYSQNLDLVPGFSGSLVHFIVKE 62

Query: 130 IEKLHAQVGRYKS 142
            E + ++  RY++
Sbjct: 63  TEAIQSKARRYEN 75