Jatropha Genome Database

JcCA0294271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0294271.10 + phase: 1 /pseudo/partial
         (229 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006063 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl...   303   4e-83
29772.m000321 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl...   288   1e-78
27940.m000333 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl...   258   1e-69

>29908.m006063 Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative
          Length = 535

 Score =  303 bits (776), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 142/155 (91%), Positives = 153/155 (98%)

Query: 75  NVVPGKWSVDSWKSKKALQLPEYPSKEDLETVLKTLEAFPPIVFAGEARSLEEKLAEAAM 134
           NVV GKWS+DSWKSKKALQLPEYP+KE+LE+VLKTL+AFPPIVFAGEARSLEEKLAEAAM
Sbjct: 74  NVVSGKWSIDSWKSKKALQLPEYPNKEELESVLKTLDAFPPIVFAGEARSLEEKLAEAAM 133

Query: 135 GNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRS 194
           GNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPV+KVGRMAGQFAKPRS
Sbjct: 134 GNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVVKVGRMAGQFAKPRS 193

Query: 195 EPFEEKNGVKLPSYRGDNINGDAVNEKSRVPDPER 229
           +PFEEKNGVKLPSYRGDN+NGDA +EKSR+PDP+R
Sbjct: 194 DPFEEKNGVKLPSYRGDNVNGDAFDEKSRIPDPQR 228


>29772.m000321 Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative
          Length = 533

 Score =  288 bits (738), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 135/151 (89%), Positives = 145/151 (96%)

Query: 79  GKWSVDSWKSKKALQLPEYPSKEDLETVLKTLEAFPPIVFAGEARSLEEKLAEAAMGNAF 138
           GKW+VDSWK+KKALQLPEYP  + LE VLKT+EAFPPIVFAGEARSLEEKLA+AAMGNAF
Sbjct: 77  GKWTVDSWKTKKALQLPEYPDADKLENVLKTIEAFPPIVFAGEARSLEEKLADAAMGNAF 136

Query: 139 LLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSEPFE 198
           LLQGGDCAESFKEF+ANNIRDTFRILLQMG VLMFGGQMPVIKVGRMAGQFAKPRS+PFE
Sbjct: 137 LLQGGDCAESFKEFSANNIRDTFRILLQMGVVLMFGGQMPVIKVGRMAGQFAKPRSDPFE 196

Query: 199 EKNGVKLPSYRGDNINGDAVNEKSRVPDPER 229
           EKNGVKLPSY+GDNINGDA +EKSR+PDPER
Sbjct: 197 EKNGVKLPSYKGDNINGDAFDEKSRIPDPER 227


>27940.m000333 Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative
          Length = 518

 Score =  258 bits (660), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 121/149 (81%), Positives = 135/149 (90%)

Query: 81  WSVDSWKSKKALQLPEYPSKEDLETVLKTLEAFPPIVFAGEARSLEEKLAEAAMGNAFLL 140
           WS+DSWKSK A QLPEYP +++LETVL++L  FPPIVFAGEAR LEE+LA AA+GNAFLL
Sbjct: 58  WSLDSWKSKPAKQLPEYPDQQELETVLQSLNNFPPIVFAGEARKLEERLASAAVGNAFLL 117

Query: 141 QGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSEPFEEK 200
           QGGDCAESFKEFNANNIRDTFR+LLQMG VL FG QMP+IKVGRMAGQFAKPRS+PFE K
Sbjct: 118 QGGDCAESFKEFNANNIRDTFRVLLQMGVVLTFGAQMPIIKVGRMAGQFAKPRSDPFEIK 177

Query: 201 NGVKLPSYRGDNINGDAVNEKSRVPDPER 229
           +GVKLPSYRGDNIN DA +EKSR PDP+R
Sbjct: 178 DGVKLPSYRGDNINADAFDEKSRRPDPQR 206