Jatropha Genome Database

JcCA0294231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0294231.10 + phase: 0 
         (257 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28153.m000288 PAC, putative                                           247   3e-66
31177.m000029 hypothetical protein                                     59   2e-09

>28153.m000288 PAC, putative
          Length = 137

 Score =  247 bits (631), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 123/137 (89%), Positives = 129/137 (94%)

Query: 121 MEILKREATPAMRLLNDLLNMHDGFDDEGWLKECKKCMIDTFPREDPFSILVPAGFDIDK 180
           MEILK+EATP+MRLLNDLLNMHDGFDDE WLKECKK MIDTFPREDPFSILVPAGFDIDK
Sbjct: 1   MEILKQEATPSMRLLNDLLNMHDGFDDEDWLKECKKRMIDTFPREDPFSILVPAGFDIDK 60

Query: 181 HQGPLQPPLEADDVLLRVDFVREVDALLQEVRHEPSEEQNIEGFDPESVASKLKQQEKQR 240
           HQGPL+PPLEADDVLLRVDFVREVDALLQEVR E +E  N+E FDPESVASKLKQQEKQR
Sbjct: 61  HQGPLRPPLEADDVLLRVDFVREVDALLQEVRDEQNEAHNVEVFDPESVASKLKQQEKQR 120

Query: 241 TIRKVEALLDLAINLKW 257
           TIRKVE LL+LAINLKW
Sbjct: 121 TIRKVEDLLELAINLKW 137


>31177.m000029 hypothetical protein
          Length = 131

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 35/58 (60%)

Query: 10  EWQAEQRKKSKXXXXXXXXXXXXXXXXXXXXXXXGLRLKGYPEEDVKKARKLVSSFIR 67
           EWQA+QR+KSK                       GLRLKGYPEEDV+KARKLVSSFIR
Sbjct: 60  EWQAQQREKSKELERLRQLEDEEEERKIEEYREIGLRLKGYPEEDVRKARKLVSSFIR 117