Jatropha Genome Database

JcCA0293541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0293541.10 - phase: 0 /partial
         (317 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006397 transcription factor, putative                          503   e-143
29333.m001091 transferase, transferring glycosyl groups, putative      53   2e-07
29883.m001957 Hypoxia-inducible factor 1 alpha inhibitor, putative     51   7e-07

>30169.m006397 transcription factor, putative
          Length = 416

 Score =  503 bits (1295), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 240/318 (75%), Positives = 263/318 (82%), Gaps = 1/318 (0%)

Query: 1   MSAAAAVNDHLYTPILDAESSVLLQSISSHGGYAYVSMATLAASGDFXXXXXXXXXXWEQ 60
           MS A ++ DHL TP+LDAES  LLQSISSHGGYAYV MATLAASG+F          WEQ
Sbjct: 1   MSGAVSITDHLSTPLLDAESPNLLQSISSHGGYAYVRMATLAASGNFRAAEAAREMAWEQ 60

Query: 61  LHSGPWHSVLPVWRDAYSMACLYVAKFHYRNAEFKDALRVLDXXXXXXXXXXRKDLDSAV 120
           LH GPWHSV PVWRDAYSMACL+VAKFHY+N EFKDALRVLD          RKDLDSA+
Sbjct: 61  LHCGPWHSVSPVWRDAYSMACLHVAKFHYQNGEFKDALRVLDMGVIMGGMLLRKDLDSAI 120

Query: 121 ETVTAKARE-NGGQSLGFDKSDRKLVRETEFDKAEALRLLPMKSLSCKIVVKRSALSLEA 179
           E +T+KARE N  +S  FD S+ KLV+ETEFDKAE LR+LP KSLSC  VVK+  LSLEA
Sbjct: 121 EIITSKAREENDSKSDRFDNSNSKLVQETEFDKAEVLRVLPAKSLSCNNVVKKCGLSLEA 180

Query: 180 FLREHLLSSSPVIISDCMAHWPARIKWNDVDYLKRVAGDRTVPVEVGKTYLCQEWKQELI 239
           FLREH+L  SPVIISDCMAHWPAR KWND+ YL RVAGDRTVPVEVGK YLC +WKQELI
Sbjct: 181 FLREHILCGSPVIISDCMAHWPARTKWNDLGYLTRVAGDRTVPVEVGKNYLCNDWKQELI 240

Query: 240 TFSQFLERIQPNNSLSAVPTYLAQHPLFDQINELRNDICVPDYCFAGGGELRSLNAWFGP 299
           TF+QFLE++Q N+S S VPTYLAQHPLFDQ+NELRNDIC+PDYCFAGGGELRSLNAWFGP
Sbjct: 241 TFAQFLEKLQSNDSSSDVPTYLAQHPLFDQVNELRNDICIPDYCFAGGGELRSLNAWFGP 300

Query: 300 AGTVTPLHHDPHHNILAQ 317
           A TVTPLHHDPHHNILAQ
Sbjct: 301 AATVTPLHHDPHHNILAQ 318


>29333.m001091 transferase, transferring glycosyl groups, putative
          Length = 810

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 20/149 (13%)

Query: 169 VVKRSALSLEAFLREHLLSSSPVIISDCMAHWPARIKWNDVDYLKRVAGDRTVPVEVGKT 228
           +V++  +S+E F+      + PV++  CM +W A   W D DYL R+ GD  V   VG  
Sbjct: 205 IVRKKGISVEEFVSNFEEPNKPVLLEGCMDNWAAFHNW-DRDYLVRICGD--VKFAVGPV 261

Query: 229 YLCQEWKQELITFSQFLERIQPNNSLSAVPTYLAQHPLFDQINELRNDICVPDY----CF 284
                 +  L  + ++ ++++        P YL      +++  L +D  VP Y     F
Sbjct: 262 ------EMRLKEYFRYADQVREER-----PLYLFDPKFAEKVPSLGSDYKVPMYFREDLF 310

Query: 285 AGGGELRSLNAWF--GPAGTVTPLHHDPH 311
              G  R    W   GPAG+ +  H DP+
Sbjct: 311 GVLGSERPDYRWIIVGPAGSGSSFHIDPN 339


>29883.m001957 Hypoxia-inducible factor 1 alpha inhibitor, putative
          Length = 488

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 64/164 (39%), Gaps = 39/164 (23%)

Query: 190 PVIISDCMAHWPARIKWN----DVDYLKRVAGD--------RTVPVEVGKTYLCQEWKQE 237
           P   +     W A  KWN     +DYL+   G         RT PV  G     +     
Sbjct: 32  PAAFNGYTRQWKAFTKWNPANGGLDYLQERVGSSTIEAMLSRTAPVFYGDLRSHERVPFP 91

Query: 238 LITFSQFL-ERI------QPNNSLS-----------AVPTYLAQHPLFD-------QINE 272
             TF  F  +RI      QP  S +           A   YLAQ P+ +       Q+  
Sbjct: 92  FSTFIDFCKQRIAKEEGHQPAVSDAEEQDHLISGDYAQQVYLAQVPIMNTEDRERVQLAT 151

Query: 273 LRNDICVPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILA 316
           LR DI +P   F    EL S+N W   A   +  H+DPHHN+L+
Sbjct: 152 LREDIQIP--AFLESKELASINLWMNNAHARSSTHYDPHHNVLS 193