Jatropha Genome Database
- JcCA0293441.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0293441.20 - phase: 0 /TE/partial
(369 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29835.m000634 dead box ATP-dependent RNA helicase, putative 447 e-126
28320.m001110 dead box ATP-dependent RNA helicase, putative 443 e-125
27574.m000220 dead box ATP-dependent RNA helicase, putative 439 e-124
29917.m001979 dead box ATP-dependent RNA helicase, putative 243 2e-64
28694.m000678 dead box ATP-dependent RNA helicase, putative 239 1e-63
29976.m000507 dead box ATP-dependent RNA helicase, putative 233 8e-62
29748.m000379 dead box ATP-dependent RNA helicase, putative 217 8e-57
30076.m004639 hypothetical protein 216 2e-56
29171.m000268 dead box ATP-dependent RNA helicase, putative 214 6e-56
29841.m002918 dead box ATP-dependent RNA helicase, putative 211 3e-55
30074.m001375 dead box ATP-dependent RNA helicase, putative 208 3e-54
30068.m002667 dead box ATP-dependent RNA helicase, putative 207 5e-54
27758.m000324 dead box ATP-dependent RNA helicase, putative 194 4e-50
30128.m009003 dead box ATP-dependent RNA helicase, putative 187 9e-48
30131.m006913 dead box ATP-dependent RNA helicase, putative 177 1e-44
30174.m009102 dead box ATP-dependent RNA helicase, putative 166 1e-41
29729.m002401 dead box ATP-dependent RNA helicase, putative 162 3e-40
29180.m000019 dead box ATP-dependent RNA helicase, putative 159 2e-39
29799.m000623 dead box ATP-dependent RNA helicase, putative 157 1e-38
30169.m006318 dead box ATP-dependent RNA helicase, putative 155 3e-38
30131.m006935 dead box ATP-dependent RNA helicase, putative 152 3e-37
30170.m014204 dead box ATP-dependent RNA helicase, putative 150 1e-36
30169.m006303 dead box ATP-dependent RNA helicase, putative 145 3e-35
30147.m014158 dead box ATP-dependent RNA helicase, putative 139 2e-33
29729.m002283 dead box ATP-dependent RNA helicase, putative 135 2e-32
30020.m000208 dead box ATP-dependent RNA helicase, putative 130 1e-30
29742.m001436 dead box ATP-dependent RNA helicase, putative 130 1e-30
29841.m002841 dead box ATP-dependent RNA helicase, putative 129 2e-30
30174.m009000 dead box ATP-dependent RNA helicase, putative 128 5e-30
28644.m000899 dead box ATP-dependent RNA helicase, putative 127 7e-30
30190.m011171 dead box ATP-dependent RNA helicase, putative 119 3e-27
29912.m005374 dead box ATP-dependent RNA helicase, putative 115 2e-26
29706.m001331 dead box ATP-dependent RNA helicase, putative 115 2e-26
30078.m002234 dead box ATP-dependent RNA helicase, putative 114 1e-25
28966.m000526 dead box ATP-dependent RNA helicase, putative 113 1e-25
29863.m001062 dead box ATP-dependent RNA helicase, putative 112 3e-25
29666.m001435 dead box ATP-dependent RNA helicase, putative 102 2e-22
30190.m011157 dead box ATP-dependent RNA helicase, putative 96 3e-20
29633.m000896 dead box ATP-dependent RNA helicase, putative 94 1e-19
29889.m003424 dead box ATP-dependent RNA helicase, putative 94 1e-19
29724.m000854 dead box ATP-dependent RNA helicase, putative 88 6e-18
58840.m000017 dead box ATP-dependent RNA helicase, putative 87 1e-17
29736.m002120 dead box ATP-dependent RNA helicase, putative 85 6e-17
29724.m000855 dead box ATP-dependent RNA helicase, putative 83 2e-16
29591.m000142 dead box ATP-dependent RNA helicase, putative 80 2e-15
29825.m000333 dead box ATP-dependent RNA helicase, putative 77 1e-14
29844.m003347 dead box ATP-dependent RNA helicase, putative 76 3e-14
45483.m000014 dead box ATP-dependent RNA helicase, putative 70 1e-12
29904.m003054 dead box ATP-dependent RNA helicase, putative 65 4e-11
29428.m000333 dead box ATP-dependent RNA helicase, putative 59 4e-09
29848.m004638 dead box ATP-dependent RNA helicase, putative 57 2e-08
29929.m004728 rothmund-thomson syndrome DNA helicase recq4, puta... 55 7e-08
29907.m000626 conserved hypothetical protein 54 1e-07
28644.m000900 dead box ATP-dependent RNA helicase, putative 49 4e-06
>29835.m000634 dead box ATP-dependent RNA helicase, putative
Length = 650
Score = 447 bits (1149), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/272 (78%), Positives = 242/272 (88%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
R LE+GVDILVATPGRLVD++ER RVSL MV+YLALDEADRMLDMGFEPQIRKIV+Q D
Sbjct: 313 LRELERGVDILVATPGRLVDLLERARVSLQMVRYLALDEADRMLDMGFEPQIRKIVEQND 372
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRN 120
MP PG RQTMLFSATFP EIQ LA+DFL +YIFL VGRVGSSTDLI QRVE VQ+ DKR+
Sbjct: 373 MPRPGARQTMLFSATFPKEIQRLATDFLFNYIFLAVGRVGSSTDLIIQRVEFVQESDKRS 432
Query: 121 HLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERA 180
HLM+LLHAQ+A+G GK+ALTLVFVETK+GAD+LEHWL +GFPA +IHGD+ Q ERE+A
Sbjct: 433 HLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLYVNGFPATSIHGDRSQQEREQA 492
Query: 181 LKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATA 240
L+SF+ G TPILVATDVA+RGLDIPHV+HVVNFDLP DIDDYVHRIGRTGRAGKSGLATA
Sbjct: 493 LRSFRSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 552
Query: 241 FFSDKNIPLAKALVELMKEVNQEVPSWLSQYA 272
FF++ N LA AL +LM+E NQEVP+WLS+YA
Sbjct: 553 FFNEGNASLAMALADLMQESNQEVPAWLSRYA 584
>28320.m001110 dead box ATP-dependent RNA helicase, putative
Length = 604
Score = 443 bits (1140), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/385 (63%), Positives = 272/385 (70%), Gaps = 62/385 (16%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD
Sbjct: 266 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 325
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRN 120
MPPPGERQTMLFSATFP EIQ LASDFLSDYIFLTVGRVGSSTDLIAQRVELVQD+DKR+
Sbjct: 326 MPPPGERQTMLFSATFPLEIQRLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDMDKRS 385
Query: 121 HLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERA 180
LM LL QKA G+HGKRALTLVFVETKRGADALEHWLS +GFPAIAIHGDKVQ+
Sbjct: 386 RLMVLLSDQKALGSHGKRALTLVFVETKRGADALEHWLSMNGFPAIAIHGDKVQMASTYL 445
Query: 181 LKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATA 240
L IGRTGRAGKSG+ATA
Sbjct: 446 L--------------------------------------------IGRTGRAGKSGVATA 461
Query: 241 FFSDKNIPLAKALVELMKEVNQEVPSWLSQYAENXX------XXXXXXXXXXXXXNKFGG 294
FFSDKN+ LAK LVELMKE QEVPSWL+QYA+N +KFGG
Sbjct: 462 FFSDKNMSLAKGLVELMKEAQQEVPSWLNQYADNSSYGVSGGGRTKRYGGSKFGGSKFGG 521
Query: 295 YDYRNE-----NHYYQSSAYVGAEPVVDSYASSSSYGDTGLGSTDYYSPPAGDLGYA--- 346
YD+R++ ++YY SSA+ A+PV D+ ASS YG+ STDYY + D GYA
Sbjct: 522 YDFRSDAQSSTDNYYNSSAHGDADPVGDACASSGPYGEVS-ASTDYYGGQSIDAGYAFPA 580
Query: 347 --ESYDAPSNGYVFDNKSVIATGWD 369
+SY A S GY + +++++A+GWD
Sbjct: 581 GSDSYVA-SQGYEYGHEAIVASGWD 604
>27574.m000220 dead box ATP-dependent RNA helicase, putative
Length = 672
Score = 439 bits (1130), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/272 (75%), Positives = 239/272 (87%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
R LE+GVDILVATPGRLVD++ER R+SL M++YLALDEADRMLDMGFEPQIRKIV+QMD
Sbjct: 337 LRELERGVDILVATPGRLVDLLERARISLQMIRYLALDEADRMLDMGFEPQIRKIVEQMD 396
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRN 120
MPPPG RQTMLFSATFP EIQ LASDFL+ YIFL VGRVGSSTDLI QRVE V + DKR+
Sbjct: 397 MPPPGRRQTMLFSATFPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVHETDKRS 456
Query: 121 HLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERA 180
HLM+LLHAQ+ + + K +LTLVFVETK+GAD+LE+WL +GFPA IHGD+ Q ERE A
Sbjct: 457 HLMDLLHAQRETEINIKHSLTLVFVETKKGADSLENWLCVNGFPATTIHGDRTQQEREMA 516
Query: 181 LKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATA 240
L+SFK G TPILVATDVA+RGLDIPHV+HVVNFDLP DIDDYVHRIGRTGRAGK+GLATA
Sbjct: 517 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATA 576
Query: 241 FFSDKNIPLAKALVELMKEVNQEVPSWLSQYA 272
FF++ N+ LA+ L +LM+E NQEVP+WL++YA
Sbjct: 577 FFNENNLSLARPLADLMQEANQEVPAWLTRYA 608
>29917.m001979 dead box ATP-dependent RNA helicase, putative
Length = 781
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/274 (44%), Positives = 182/274 (66%), Gaps = 13/274 (4%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
+ L++GVDI+VATPGRL D++E R+SL V YL LDEADRMLDMGFEPQIRKIV+++
Sbjct: 279 LKELDRGVDIVVATPGRLNDILEMRRISLSQVSYLVLDEADRMLDMGFEPQIRKIVKEV- 337
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGS--STDLIAQRVELVQDVDK 118
P RQT++++AT+P E++ +A+D L + + + +G V + I Q +E++ ++K
Sbjct: 338 ---PSRRQTLMYTATWPREVRKIAADLLVNPVQVNIGNVDELVANKSITQYIEVLAPMEK 394
Query: 119 RNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERE 178
L ++L +Q+ + ++F TK+ D L L+R+ F A AIHGDK Q ER+
Sbjct: 395 HRRLEQILRSQEPG------SKIIIFCSTKKMCDQLARNLTRT-FGAAAIHGDKSQSERD 447
Query: 179 RALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLA 238
L F+ G +P+LVATDVA+RGLDI + V+N+D P ++DYVHRIGRTGRAG +G+A
Sbjct: 448 HVLSQFRTGRSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVA 507
Query: 239 TAFFSDKNIPLAKALVELMKEVNQEVPSWLSQYA 272
FF D++ A L+++++ +Q VP + A
Sbjct: 508 YTFFGDQDAKYASDLIKVLEGASQRVPPEIRDMA 541
>28694.m000678 dead box ATP-dependent RNA helicase, putative
Length = 505
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 175/268 (65%), Gaps = 19/268 (7%)
Query: 2 RNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDM 61
R+L+KGV+I++ATPGRL+DM+E +L V YL LDEADRMLDMGF+PQIRKIV Q+
Sbjct: 217 RDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIR- 275
Query: 62 PPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDL-----IAQRVELVQDV 116
+RQT+ +SAT+P E++ LA FL + + +G S DL I Q V++V +
Sbjct: 276 ---PDRQTLYWSATWPKEVEQLARQFLYNPYKVVIG----SADLKANHAIRQHVDIVSEN 328
Query: 117 DKRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVE 176
K N L++LL G R L+F++TK+G D + L G+PA++IHGDK Q E
Sbjct: 329 QKYNKLVKLLE----DIMDGSR--ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAE 382
Query: 177 RERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSG 236
R+ L FK G +PI+ ATDVA+RGLD+ V V+N+D P ++DYVHRIGRTGRAG G
Sbjct: 383 RDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKG 442
Query: 237 LATAFFSDKNIPLAKALVELMKEVNQEV 264
A FF+ N AK L+ +++E Q+V
Sbjct: 443 TAYTFFTASNARFAKELISILEEAGQKV 470
>29976.m000507 dead box ATP-dependent RNA helicase, putative
Length = 564
Score = 233 bits (595), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 174/260 (66%), Gaps = 6/260 (2%)
Query: 4 LEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPP 63
L GVDI+VATPGR +D +++G SL + ++ LDEADRMLDMGFEPQIR+++ +
Sbjct: 242 LRAGVDIMVATPGRFIDHLQQGNTSLSRISFIVLDEADRMLDMGFEPQIREVLHNL---- 297
Query: 64 PGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLM 123
P QT+LFSAT P EI++LA ++L+ + + VG+V T ++Q ++ V + +K + L+
Sbjct: 298 PERHQTLLFSATMPEEIETLAQEYLTTPVQVKVGKVSGLTANVSQVLKKVSESEKIDCLL 357
Query: 124 ELL--HAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERAL 181
LL A +A LT+VFV+ K D + L G A+A+HG + Q ERE AL
Sbjct: 358 GLLVEDASQAERADHPFPLTVVFVDRKARCDEVAEALVAQGLRAVALHGGRSQNEREAAL 417
Query: 182 KSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAF 241
F+ G T ILVATDVASRGLD+ V+HV+N DLPK ++DYVHR+GRTGRAG +G AT+F
Sbjct: 418 HDFRSGSTDILVATDVASRGLDVTGVTHVINLDLPKTMEDYVHRVGRTGRAGSAGQATSF 477
Query: 242 FSDKNIPLAKALVELMKEVN 261
++D+++ L + + + +V
Sbjct: 478 YTDRDLFLVAQIKKAIADVK 497
>29748.m000379 dead box ATP-dependent RNA helicase, putative
Length = 956
Score = 217 bits (552), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 159/242 (65%), Gaps = 13/242 (5%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
+ L +G DI+VATPGRL D++E ++ G V L LDEADRMLDMGFEPQIRKIV ++
Sbjct: 604 LKELTRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEI- 662
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVG--SSTDLIAQRVELVQDVDK 118
P RQT++++AT+P E++ +A+D L + + + +G V ++ I Q VE+V ++K
Sbjct: 663 ---PPRRQTLMYTATWPKEVRKIANDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEK 719
Query: 119 RNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERE 178
+ L ++L AQ+ + + ++F TKR D L + F A AIHGDK Q ER+
Sbjct: 720 ESRLGQILRAQE------RGSKVIIFCSTKRLCDQLARSIGHQ-FGAAAIHGDKSQGERD 772
Query: 179 RALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLA 238
L F+ G +PILVATDVA+RGLDI + V+N+D P I+DYVHRIGRTGRAG +G+
Sbjct: 773 WVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVN 832
Query: 239 TA 240
A
Sbjct: 833 VA 834
>30076.m004639 hypothetical protein
Length = 791
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/274 (44%), Positives = 164/274 (59%), Gaps = 12/274 (4%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
F+ L+ G DI+VATPGRL+D+++ +++ YL LDEADRM D+GFEPQIR IV Q+
Sbjct: 341 FKELKAGCDIVVATPGRLIDLLKMKALNMSKATYLVLDEADRMFDLGFEPQIRSIVGQIR 400
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELV-QDVDKR 119
+RQT+LFSAT P +++ LA + LSD I +TVG VG + + I Q V+++ D +K
Sbjct: 401 ----PDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDAEKL 456
Query: 120 NHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERER 179
L E L G+ LVF K D +E L++ GF A+HGDK Q R
Sbjct: 457 PWLFEKLPGMIDDGD------VLVFASKKATVDEIESQLAQKGFKVAALHGDKDQASRME 510
Query: 180 ALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAG-KSGLA 238
L+ FK GV +L+ATDVA+RGLDI + VVNFD+ +D+D +VHRIGRTGRAG K G A
Sbjct: 511 ILQKFKSGVYHVLIATDVAARGLDIKSLKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTA 570
Query: 239 TAFFSDKNIPLAKALVELMKEVNQEVPSWLSQYA 272
+ K A LV + Q V L A
Sbjct: 571 YTLITQKEARFAGELVNSLIAAGQNVSGELMDLA 604
>29171.m000268 dead box ATP-dependent RNA helicase, putative
Length = 500
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 166/268 (61%), Gaps = 13/268 (4%)
Query: 4 LEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPP 63
++KGV I+VATPGRL DM+ + +++L +YL LDEADR++D+GFE IR++
Sbjct: 184 VKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK--- 240
Query: 64 PGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLM 123
+RQT+LFSAT P +IQ+ A L + + VGR G++ + Q VE V+ K +L+
Sbjct: 241 -AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLL 299
Query: 124 ELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKS 183
E L L+F E K D + +L G A+AIHG K Q ERE A+ S
Sbjct: 300 ECLQKTPPP--------VLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISS 351
Query: 184 FKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFS 243
FK G +LVATDVAS+GLD P + HV+N+D+P +I++YVHRIGRTGR GK+G+AT F +
Sbjct: 352 FKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFIN 411
Query: 244 -DKNIPLAKALVELMKEVNQEVPSWLSQ 270
+++ L L++E Q +P L++
Sbjct: 412 KNQSETTLLDLKHLLQEAKQRIPPVLAE 439
>29841.m002918 dead box ATP-dependent RNA helicase, putative
Length = 585
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 165/268 (61%), Gaps = 13/268 (4%)
Query: 4 LEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPP 63
++KGV I+VATPGRL DM+ + +++L +YL LDEADR++D+GFE IR+I
Sbjct: 268 VKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREIFSYFK--- 324
Query: 64 PGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLM 123
+RQT+LFSAT P ++Q+ A L + + V R G++ + Q +E V+ DK +L+
Sbjct: 325 -AQRQTLLFSATMPTKVQNFAKSALVKPVIVNVSRAGAANLDVIQEIEYVKQEDKTAYLL 383
Query: 124 ELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKS 183
+ L L+F E+K D + +L G +AIHG K Q ERE A+ S
Sbjct: 384 KCLEKTPPQ--------VLIFCESKADVDKIHEYLLLKGVEVVAIHGGKDQEEREYAISS 435
Query: 184 FKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFS 243
FK G +L+ATDV S+GLD P + HV+N+D+P +I++YVHRIGRTGR GK+G+AT F +
Sbjct: 436 FKSGKKDVLIATDVVSKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFIN 495
Query: 244 -DKNIPLAKALVELMKEVNQEVPSWLSQ 270
+++ L L++E Q++P L +
Sbjct: 496 KNQSETTLLDLKHLLQEAKQKIPPVLVE 523
>30074.m001375 dead box ATP-dependent RNA helicase, putative
Length = 714
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 171/284 (60%), Gaps = 21/284 (7%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQM- 59
FR + +G ++++ATPGRL+D +ER L Y+ LDEADRM+DMGFEPQ+ ++ M
Sbjct: 415 FR-IRQGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 473
Query: 60 --DMPPPGE----------RQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIA 107
++ P E R T +FSAT P ++ LA +L + + + +G G +TDLI+
Sbjct: 474 SSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVNIGTAGKATDLIS 533
Query: 108 QRVELVQDVDKRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIA 167
Q V +V++ +K L LL + +VFV TK+ AD + L ++ +
Sbjct: 534 QHVIMVKESEKFFKLQRLL-------DEAGDKTAIVFVNTKKNADTVAKNLDKAKYRVTT 586
Query: 168 IHGDKVQVERERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIG 227
+HG K Q +RE +L+ F+ +LVATDVA RG+DIP V+HV+N+D+P +I+ Y HRIG
Sbjct: 587 LHGGKSQEQREISLEGFRTKKYTVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 646
Query: 228 RTGRAGKSGLATAFFSDKNIPLAKALVELMKEVNQEVPSWLSQY 271
RTGRAGKSG+AT F + + + L +++ + N VP L+++
Sbjct: 647 RTGRAGKSGVATTFLTLHDTDVFYDLKQMLVQSNSHVPPELAKH 690
>30068.m002667 dead box ATP-dependent RNA helicase, putative
Length = 534
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/271 (42%), Positives = 170/271 (62%), Gaps = 10/271 (3%)
Query: 3 NLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMP 62
+L+ GVDI++ATPGRL D+IE L V +L LDEADRMLDMGF ++R I+ +
Sbjct: 235 SLKSGVDIVIATPGRLKDLIEMNICHLMEVSFLVLDEADRMLDMGFRQEVRSILSKT--- 291
Query: 63 PPGERQTMLFSATFPHEIQSLASDFLS-DYIFLTVGRVGSSTDL-IAQRVELVQDVDKRN 120
RQ ++FSAT+P ++ +LA +++ + I + VG ++ + + Q VE++ D +
Sbjct: 292 -CSARQMIMFSATWPLDVHNLAEEYMDRNPIKVVVGSEDTAANHDVMQIVEVLDDHLRDK 350
Query: 121 HLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERA 180
L+ LL + +R LVF ++ A+ L+ L RSG+ ++IHG+K Q +R +A
Sbjct: 351 RLLALLEKYHKT----QRNRVLVFALYQKEAERLDGMLHRSGWNVVSIHGNKAQEQRTKA 406
Query: 181 LKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATA 240
L FK G P++VATDVA+RGLD+P V V+N+ P +DYVHRIGRTGRAGK G+A
Sbjct: 407 LSLFKKGSCPLMVATDVAARGLDVPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHT 466
Query: 241 FFSDKNIPLAKALVELMKEVNQEVPSWLSQY 271
FF+ N LA LV +++E Q VP L ++
Sbjct: 467 FFTHHNKGLAGELVNVLREAGQVVPDALLKF 497
>27758.m000324 dead box ATP-dependent RNA helicase, putative
Length = 1173
Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 164/273 (60%), Gaps = 13/273 (4%)
Query: 4 LEKGVDILVATPGRLVDMI--ERGRVS-LGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
L++G +I+V TPGR++D++ G+++ L V YL +DEADRM DMGFEPQI +IVQ +
Sbjct: 647 LKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNI- 705
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRN 120
P +RQT+LFSATFP +++ LA L+ + + VG I Q VE+ R
Sbjct: 706 RP---DRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEV------RP 756
Query: 121 HLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERA 180
L + G ++ L+FV+++ DAL L + G+P +++HG K Q +RE
Sbjct: 757 ESERFLRLLELLGEWNEKGKILIFVQSQDKCDALFRDLLKHGYPCLSLHGAKDQTDREST 816
Query: 181 LKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATA 240
+ FK V +L+AT +A+RGLD+ + VVNFD+P +DYVHR+GRTGRAG+ G A
Sbjct: 817 ISDFKSNVCNLLIATSIAARGLDVKELDLVVNFDVPNHYEDYVHRVGRTGRAGRKGCAIT 876
Query: 241 FFSDKNIPLAKALVELMKEVNQEVPSWLSQYAE 273
F S+++ A LV+ ++ Q VP L A+
Sbjct: 877 FISEEDARYAPDLVKALELSEQVVPEDLKALAD 909
>30128.m009003 dead box ATP-dependent RNA helicase, putative
Length = 772
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 156/257 (60%), Gaps = 18/257 (7%)
Query: 2 RN-LEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
RN L +GVD++V TPGR++D+I G + LG V+YL LDEAD+ML GFE + I++ +
Sbjct: 238 RNALSRGVDVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENL- 296
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVEL----VQDV 116
P +RQ+MLFSAT P ++ LA +L + L + VG + +A+ ++L
Sbjct: 297 ---PSKRQSMLFSATMPTWVKKLARKYLDNP--LQIDLVGDQEEKLAEGIKLYAISTNAT 351
Query: 117 DKRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVE 176
KR+ L +L+ + K T++F +TKR AD + L+ S + A+HGD Q +
Sbjct: 352 SKRSILSDLVTV------YAKGGKTIIFTQTKRDADEVSMVLTNS-IASEALHGDISQHQ 404
Query: 177 RERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSG 236
RER L F+ G +LVATDVASRGLDIP+V V++++LP D + +VHR GRTGRAGK G
Sbjct: 405 RERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 464
Query: 237 LATAFFSDKNIPLAKAL 253
A F+ K+L
Sbjct: 465 TAVLMFTSSQRRTVKSL 481
>30131.m006913 dead box ATP-dependent RNA helicase, putative
Length = 540
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 136/207 (65%), Gaps = 19/207 (9%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
R+L +GV+I++ATPGRL+DM+E +L V YL LDEADRMLDMGFEPQIRK+V Q+
Sbjct: 342 IRDLHRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKLVSQIR 401
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDL-----IAQRVELVQD 115
+RQT+ +SAT+P E+++LA FL + + +G STDL I Q VE+V +
Sbjct: 402 ----PDRQTLYWSATWPREVETLARQFLRNPYKVVIG----STDLKANQSINQVVEIVSE 453
Query: 116 VDKRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQV 175
++K N L++LL G R L+F+ETK+G D + L G+P ++IHGDK Q
Sbjct: 454 MEKYNRLIKLLKEVM----DGSR--ILIFMETKKGCDQVTRQLRMDGWPVLSIHGDKNQT 507
Query: 176 ERERALKSFKIGVTPILVATDVASRGL 202
ER+ L FK G +PI+ ATDVA+RGL
Sbjct: 508 ERDWVLSEFKSGRSPIMTATDVAARGL 534
>30174.m009102 dead box ATP-dependent RNA helicase, putative
Length = 578
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 127/210 (60%), Gaps = 12/210 (5%)
Query: 34 YLALDEADRMLDMGFEPQIRKIVQQMDMPPPGERQTMLFSATFPHEIQSLASDFLSDYIF 93
YL LDEADR++D+GFE IR+++ +RQT+LFSAT P ++Q+ A L +
Sbjct: 296 YLTLDEADRLVDLGFEEDIREVLSYFK----AQRQTLLFSATMPTQVQNFAISALVKPVI 351
Query: 94 LTVGRVGSSTDLIAQRVELVQDVDKRNHLMELLHAQKASGNHGKRALTLVFVETKRGADA 153
+ VGR G++ + QRV+ V+ K+++++ L + ++F + K D
Sbjct: 352 INVGRPGAANINVVQRVKYVKQERKKSYILHCLKKTQPP--------VIIFCKDKADVDD 403
Query: 154 LEHWLSRSGFPAIAIHGDKVQVERERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNF 213
+ L G A+AIHG Q ERE A+ SFK G +L+ATDVAS+GLD + HV+N+
Sbjct: 404 IHLNLLSEGVDAVAIHGGMDQEEREHAVSSFKAGKKDVLIATDVASKGLDFADIQHVINY 463
Query: 214 DLPKDIDDYVHRIGRTGRAGKSGLATAFFS 243
D+P ++++YVHRIGRTGR K G AT F +
Sbjct: 464 DMPAEVENYVHRIGRTGRCSKKGRATTFIN 493
>29729.m002401 dead box ATP-dependent RNA helicase, putative
Length = 535
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 8 VDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGER 67
DILV+TP RL I + +V L V+YL LDE+D++ ++G QI + + P
Sbjct: 257 CDILVSTPLRLQLAIRKKKVDLSRVEYLVLDESDKLFELGLLKQIDSVFKACSNPSVIRS 316
Query: 68 QTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLMELLH 127
LFSAT P ++ LA + D + + VGR ++++ I Q+ LV + L+ L
Sbjct: 317 ---LFSATLPESVEELARTIMHDAVRVIVGRKNAASETIKQK--LVFTGSEEGKLIALRQ 371
Query: 128 AQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKSFKIG 187
+ S N L+FV+ K A+ L L IH D +Q +RE A+ F+ G
Sbjct: 372 SFAESLNPP----VLIFVQNKERANELYEELKFDSIRVGVIHSDLLQTQREIAVDDFRAG 427
Query: 188 VTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFSDKNI 247
+ +L+ATDV +RG+D V+ V+N+D P Y+HRIGR+GRAG++G A F+++ ++
Sbjct: 428 NSWVLIATDVVARGMDFKGVNCVINYDFPNSAAAYIHRIGRSGRAGRTGEAITFYTENDV 487
Query: 248 PLAKALVELMKEVNQEVPSWL 268
P+ + + +M EVPSW+
Sbjct: 488 PVLRNIANVMTVSGCEVPSWI 508
>29180.m000019 dead box ATP-dependent RNA helicase, putative
Length = 465
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 133/233 (57%), Gaps = 13/233 (5%)
Query: 4 LEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPP 63
L G DI+VATPGRL+D+I+ + + L LDEADR+LD+GF ++ +I+ +
Sbjct: 123 LRGGADIVVATPGRLLDLIDHNALKISRAAMLVLDEADRLLDLGFSEELNRILALL---- 178
Query: 64 PGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLM 123
P +RQ + FSATFP +Q LA L + V +S I QR V DV +R L+
Sbjct: 179 PKQRQNLFFSATFPPAVQKLADSILHQPARIEVLSEPASKPDIVQRAIAV-DVPRRTMLL 237
Query: 124 E-LLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALK 182
+ L+ + G +VFV TK AD + L+R+G A + HG+ Q R L
Sbjct: 238 KHLIQEHQWRG-------VMVFVATKYAADHVADKLNRNGIRAASFHGELSQGARTETLT 290
Query: 183 SFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKS 235
F+ G LVATDVA+RG+DI + VVN+DLP+ DY HRIGRTGRA ++
Sbjct: 291 DFRSGRLQALVATDVAARGIDIARLPAVVNYDLPRSAVDYTHRIGRTGRAARA 343
>29799.m000623 dead box ATP-dependent RNA helicase, putative
Length = 407
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 143/269 (53%), Gaps = 18/269 (6%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
R LE GV ++ TPGR+ DMI+R + +K L LDE+D ML GF+ QI + + +
Sbjct: 146 IRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL- 204
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQ----DV 116
P E Q +L SAT P+EI + S F++D I + V R + + I Q V+
Sbjct: 205 ---PPELQVVLISATLPNEILEMTSKFMTDPIKILVKRDELTLEGIKQFFVAVEREEWKF 261
Query: 117 DKRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVE 176
D L + L +A ++F TKR D L + + F ++HGD Q E
Sbjct: 262 DTLCDLYDTLTITQA----------VIFCNTKRKVDWLTEKMRNNNFTVSSMHGDMPQKE 311
Query: 177 RERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSG 236
R+ + F+ G T +L+ TDV +RGLD+ VS V+N+DLP + + Y+HRIGR+GR G+ G
Sbjct: 312 RDAIMGEFQSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKG 371
Query: 237 LATAFFSDKNIPLAKALVELMKEVNQEVP 265
+A F +I + + + + E+P
Sbjct: 372 VAINFVKSDDIKILRDMEQYYSTQIDEMP 400
>30169.m006318 dead box ATP-dependent RNA helicase, putative
Length = 442
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 143/259 (55%), Gaps = 15/259 (5%)
Query: 10 ILVATPGRLVDMIERGR-VSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGERQ 68
I+VATPGRLVD + + SL +KYL LDEADR+L+ FE + +I++ + P ER+
Sbjct: 134 IVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSLDEILKVI----PRERR 189
Query: 69 TMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLMELLHA 128
T LFSAT +++ L L + + + S+ D + Q + K +L+ +L
Sbjct: 190 TFLFSATMTKKVKKLQRACLRNPVKIEAASKYSTVDTLKQEYRFIPAKYKDCYLVYILTE 249
Query: 129 QKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKSFKIGV 188
+ S ++VF T L L G AI I+G Q +R AL FK G
Sbjct: 250 KSGST-------SMVFTRTCDATTFLALVLRNLGLRAIPINGHMTQSKRLGALNKFKAGE 302
Query: 189 TPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFSDKNIP 248
IL+ TDVASRGLDIP V V+N+D+P + DY+HR+GRT RAG+SG+A + + +
Sbjct: 303 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEV- 361
Query: 249 LAKALVELMKEVNQEVPSW 267
+ +++ K + +++P +
Sbjct: 362 --EWFIQIEKLIGKKLPEY 378
>30131.m006935 dead box ATP-dependent RNA helicase, putative
Length = 514
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 150/267 (56%), Gaps = 11/267 (4%)
Query: 4 LEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPP 63
+++GV+++V TPGRL+D++ + + L + +DE D ML GF Q+ +I + P
Sbjct: 241 IQQGVELIVGTPGRLIDLLTKHDIELDNMIIFVIDEVDCMLQRGFRDQVMQIFWALSQP- 299
Query: 64 PGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLM 123
Q +L+SAT E++ +AS D +++G+ + + Q V+ K+ L
Sbjct: 300 ----QVLLYSATVTQEVEKMASSMAKDMALVSIGQPNRPSKAVKQLAIWVEPKQKKQKLF 355
Query: 124 ELLHAQKASGNHGKRALTLVFVETKRGADALEHWLS-RSGFPAIAIHGDKVQVERERALK 182
++L +++ H +V+V ++ GAD L + ++ +G+ +++IHG+K ER +K
Sbjct: 356 DILMSKQ----HFMPP-AVVYVGSRLGADLLSNAITVTTGWKSLSIHGEKSMKERREIMK 410
Query: 183 SFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFF 242
SF +G ++VAT V RG+D+ V V+ FD+P I +Y+H+IGR R G+ G+A F
Sbjct: 411 SFLVGEVTVIVATGVLGRGVDLFGVRQVIIFDMPNSIKEYIHQIGRASRMGEGGIAIVFV 470
Query: 243 SDKNIPLAKALVELMKEVNQEVPSWLS 269
+++N L +E++K +P L+
Sbjct: 471 NEENKNLFPEFIEVLKSSAAVIPRELA 497
>30170.m014204 dead box ATP-dependent RNA helicase, putative
Length = 783
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 142/252 (56%), Gaps = 17/252 (6%)
Query: 9 DILVATPGRLVDMIERG-RVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGER 67
DI+VATPGR++D + V L + L LDEADR+L++GF +I ++V+ P R
Sbjct: 270 DIVVATPGRMIDHLRNTMSVDLDDLAVLILDEADRLLELGFSAEIHELVRLC----PKRR 325
Query: 68 QTMLFSATFPHEIQSLASDFLSDYIFLT----VGRVGSSTDLIAQRVELVQDVDKRNHLM 123
QTMLFSAT EI L L+ + L+ R + T+ + R+ +++V++ L+
Sbjct: 326 QTMLFSATMTEEINELIKLSLTKPLRLSADPSTKRPATLTEEVV-RIRRMREVNQEAVLL 384
Query: 124 ELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKS 183
L S R ++F TK+ A L+ +GF A +HG+ QV+R AL+
Sbjct: 385 AL-----CSKTFTSR--VIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALEL 437
Query: 184 FKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFS 243
F+ L+ATDVA+RGLDI V V+N+ P+++ YVHR+GRT RAG+ G A F +
Sbjct: 438 FRKQQVDFLIATDVAARGLDIIGVQTVINYACPRELTSYVHRVGRTARAGREGYAVTFVT 497
Query: 244 DKNIPLAKALVE 255
D + L KA+ +
Sbjct: 498 DTDRSLLKAIAK 509
>30169.m006303 dead box ATP-dependent RNA helicase, putative
Length = 502
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 132/247 (53%), Gaps = 11/247 (4%)
Query: 10 ILVATPGRLVDMIERGR---VSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGE 66
+++ATPGR+ ++E K+L LDEADR+LD+GFE ++R + Q + P
Sbjct: 184 VVIATPGRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLDVGFEDELRVVFQCL----PKN 239
Query: 67 RQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLMELL 126
RQT+LFSAT ++SL + F + D + Q+ LV K +L+ +L
Sbjct: 240 RQTLLFSATMTSNLESLLEVSANKAYFYEAYEGFKTVDTLKQQYVLVPKNVKDVYLVYIL 299
Query: 127 HAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKSFKI 186
+ G ++FV T R L L A+H K Q R AL+ FK
Sbjct: 300 SKMEDMGIRS----AIIFVSTCRTCYLLSLLLEELEKEPAALHSFKSQSLRLSALRRFKS 355
Query: 187 GVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFSDKN 246
G IL+ATDVASRGLDIP V VVN+DLP+ DYVHR+GRT RAG+ GLA +F S +
Sbjct: 356 GQASILIATDVASRGLDIPTVDLVVNYDLPRYPRDYVHRVGRTARAGRGGLAMSFISQND 415
Query: 247 IPLAKAL 253
L + +
Sbjct: 416 FVLIREI 422
>30147.m014158 dead box ATP-dependent RNA helicase, putative
Length = 690
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 141/249 (56%), Gaps = 9/249 (3%)
Query: 3 NLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMP 62
+L++GVDI+V TPGR+ D IERG ++L +K+ LDEAD ML MGF + I+ +++
Sbjct: 229 SLKRGVDIVVGTPGRVKDHIERGNINLSYLKFRVLDEADEMLRMGFVEDVELILGKVE-- 286
Query: 63 PPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHL 122
+ QT+LFSAT P ++ ++S FL T+ VG+ + V + + +
Sbjct: 287 DVSKVQTLLFSATLPEWVKQISSRFLKAS-KKTIDLVGNEKMKASTNVRHIILPCSASAI 345
Query: 123 MELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALK 182
+++ + G R T++F E + A+ L L A A+HG+ Q +RE L
Sbjct: 346 PQVIPDIIRCYSSGGR--TIIFTEKRESANELAGLL----HGARALHGEIQQSQREVTLS 399
Query: 183 SFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFF 242
F+ G LVAT+VA+RGLDI V ++ + P+D++ Y+HR GRTGRAG +G+A +
Sbjct: 400 GFRSGKFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY 459
Query: 243 SDKNIPLAK 251
+ ++K
Sbjct: 460 DPRRSNISK 468
>29729.m002283 dead box ATP-dependent RNA helicase, putative
Length = 592
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 141/274 (51%), Gaps = 36/274 (13%)
Query: 5 EKGVDILVATPGRLVDMIERGRV-SLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPP 63
E+G +IL+ TPGRL D++ER + ++ L LDEADR+LDMGF+ QI I+ ++
Sbjct: 141 EEGANILIGTPGRLFDIMERVDILDFRNLEVLILDEADRLLDMGFQKQITSIISRL---- 196
Query: 64 PGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTD---------------LIAQ 108
P R+T LFSAT ++ LA L + + + V S + L +
Sbjct: 197 PKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAQTKSLNESASSQLSSSKTPSGLQLE 256
Query: 109 RVELVQDVDKRNHLMELLHAQKASGNHGKRALTLVFVETKRGAD----ALEHWLSRSGFP 164
+E D+ K +HL+ LL N K +V+ T D L + F
Sbjct: 257 YLECEADM-KPSHLVSLL-------NKNKSKKIIVYFMTCACVDYWGVVLPRLTALKDFS 308
Query: 165 AIAIHGDKVQVERERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVH 224
I +HG Q R++AL SF + IL+ TDVA+RGLDIP V +V +D P+D + ++H
Sbjct: 309 LIPLHGKMKQTARDKALASFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFIH 368
Query: 225 RIGRTGRAGKSGLATAFFSDKNIPLAKALVELMK 258
R+GRT R G+ G A F +P +A VE ++
Sbjct: 369 RVGRTARLGRQGSAIVFL----LPKEEAYVEFLR 398
>30020.m000208 dead box ATP-dependent RNA helicase, putative
Length = 789
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 132/251 (52%), Gaps = 14/251 (5%)
Query: 1 FRNLEKGVDILVATPGRLVDMI-ERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQM 59
F L + DI++ATPGRL+ + E +SL V+Y+ DEAD + MGF Q+ +I+ Q+
Sbjct: 141 FEELAQNPDIIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADSLFGMGFAEQLHQILTQL 200
Query: 60 DMPPPGERQTMLFSATFPHEIQSLASDFLSD--YIFLTVGRVGSSTDLIAQRVELVQDVD 117
RQT+LFSAT P + A L D + L V S DL L Q+ +
Sbjct: 201 S----ENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDVD-TKISPDLKTVFFTLRQE-E 254
Query: 118 KRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVER 177
K L+ L+ +S TL+FV TK + L G +GD Q R
Sbjct: 255 KYAALLYLVREHISSDQQ-----TLIFVSTKHHVEFLNILFREEGIEPSVCYGDMDQDAR 309
Query: 178 ERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGL 237
+ + F+ T +L+ TDVA+RG+DIP + +V+N+D P +VHR+GR RAG++G
Sbjct: 310 KIHVSRFRAQKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGT 369
Query: 238 ATAFFSDKNIP 248
A +F + +++P
Sbjct: 370 AFSFVTSEDMP 380
>29742.m001436 dead box ATP-dependent RNA helicase, putative
Length = 751
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 133/261 (50%), Gaps = 20/261 (7%)
Query: 8 VDILVATPGRLVDMIERGR---VSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 64
ILVATPGRL D IE L VK L LDEAD +LDMGF I +I+ + P
Sbjct: 412 CQILVATPGRLQDHIENTAGFATRLMGVKVLILDEADHLLDMGFRKDIERIIAAV----P 467
Query: 65 GERQTMLFSATFPHEIQSLASDFLS-DYIFL-TVGRVGSSTDLIAQRVELVQDVDKRNHL 122
+RQT+LFSAT P E++ + L D+ F+ TV T +++ LV +DK L
Sbjct: 468 KQRQTLLFSATVPEEVRQICHIALRRDHEFINTVPEGTDETHTQVRQMHLVAPLDKHFPL 527
Query: 123 MELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALK 182
+ +L + N + L +F T + + L IH K Q R R
Sbjct: 528 LYVLLKDHIADNIDYKVL--LFCTTAMVTRMVANLLGELKLNVREIHSRKPQSYRTRVSD 585
Query: 183 SFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLAT--- 239
F+ ILV +DV++RG+D P V+ V+ LP D + Y+HR+GRTGR GK G+
Sbjct: 586 EFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKGKEGVGILLL 645
Query: 240 -----AFFSD-KNIPLAKALV 254
+F S K++P++KA V
Sbjct: 646 APWEESFLSTIKDLPISKAPV 666
>29841.m002841 dead box ATP-dependent RNA helicase, putative
Length = 427
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 125/236 (52%), Gaps = 13/236 (5%)
Query: 10 ILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGERQT 69
++V TPGR++ + + L V++ LDE D+ML+ +R+ VQ++ P ++Q
Sbjct: 169 VVVGTPGRILALARDKDLGLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPYDKQV 225
Query: 70 MLFSATFPHEIQSLASDFLSDYIFLTVGRVGSST--DLIAQRVELVQDVDKRNHLMELLH 127
M+FSAT EI+ + F+ + + V T L+ ++L + ++K L +LL
Sbjct: 226 MMFSATLSKEIRPVCKKFMQAPMEIYVDDEAKLTLHGLVQHYIKLTE-LEKNRKLNDLLD 284
Query: 128 AQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKSFKIG 187
A + ++FV++ A L L FP+I IH Q ER K+FK G
Sbjct: 285 ALDFNQ-------VVIFVKSVSRAAELNKLLMECNFPSICIHSGMSQEERLTKYKNFKEG 337
Query: 188 VTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFS 243
ILVATD+ RG+DI V+ V+N+D+P D Y+HR+GR GR G GLA F S
Sbjct: 338 HKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
>30174.m009000 dead box ATP-dependent RNA helicase, putative
Length = 507
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 135/274 (49%), Gaps = 26/274 (9%)
Query: 4 LEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPP 63
L + V +LV TPGR++D+ ++G L L +DEAD++L F+P + ++++ +
Sbjct: 248 LYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSVEQLIRFL---- 303
Query: 64 PGERQTMLFSATFPHEIQSLASDFLSD-YIF-----LTVGRVGSSTDLIAQRVELVQDVD 117
P RQ ++FSATFP ++ FL Y+ LT+ + + +R Q V
Sbjct: 304 PPTRQILMFSATFPVTVKDFKDRFLQKPYVINLMDELTLKGITQFYAFVEER----QKVH 359
Query: 118 KRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVER 177
N L L ++ ++F + + L ++ G+ IH +Q R
Sbjct: 360 CLNTLFSKLQINQS----------IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 409
Query: 178 ERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGL 237
R F+ G LV TD+ +RG+DI V+ V+NFD PK+ + Y+HR+GR+GR G GL
Sbjct: 410 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGL 469
Query: 238 ATAFFS-DKNIPLAKALVELMKEVNQEVPSWLSQ 270
A + + L + EL E+ Q +P + Q
Sbjct: 470 AVNLITYEDRFNLYRIEQELGTEIKQ-IPPHIDQ 502
>28644.m000899 dead box ATP-dependent RNA helicase, putative
Length = 601
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 121/237 (51%), Gaps = 11/237 (4%)
Query: 3 NLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIV----QQ 58
+L +D++V TPGR++ IE G + G +KYL LDEAD M D GF P IRK + +
Sbjct: 244 SLNSPIDMIVGTPGRILQHIEDGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKNR 303
Query: 59 MDMPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDK 118
P QT+L +AT +Q L + + L + + + R + ++
Sbjct: 304 ASKPDGLGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTL--HKKIASARHDFIKLSGS 361
Query: 119 RNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERE 178
N L LL + S G R +VF T + A++H+L+ + + HG+ +R
Sbjct: 362 ENKLEALLQVLEPSLAKGNRV--MVFCNTLNSSRAVDHFLAENQISTVNYHGEVPAEQRV 419
Query: 179 RALKSFKI--GVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAG 233
L+ FK G P LV TD+A+RGLD+ V HVV FD P + DY+HR GRT R G
Sbjct: 420 ENLQKFKSDDGDCPTLVCTDLAARGLDL-DVDHVVMFDFPLNSIDYLHRTGRTARMG 475
>30190.m011171 dead box ATP-dependent RNA helicase, putative
Length = 771
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 122/234 (52%), Gaps = 11/234 (4%)
Query: 8 VDILVATPGRLVDMIE-RGRVSLGM--VKYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 64
I+VATPGRL+D IE +G +S+ + +K L LDEAD +LD+GF + KI+ + P
Sbjct: 431 CQIIVATPGRLLDHIENKGGLSVHLMGLKMLILDEADHLLDLGFRKDVEKIIDCL----P 486
Query: 65 GERQTMLFSATFPHEIQSLASDFLS-DYIFL-TVGRVGSSTDLIAQRVELVQDVDKRNHL 122
ER +++FSAT P E++ ++ L ++ F+ TVG T ++ +V V H
Sbjct: 487 RERHSLMFSATIPKEVRRISQLVLKREHAFIDTVGLGSVETPSKVKQFSVV--VPHELHF 544
Query: 123 MELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALK 182
+ H K +VF T + L IH K Q+ R R
Sbjct: 545 QVVHHFLKEHILQTPDYKVIVFCTTGMVTSLMYTLLREMKMNVKEIHSRKPQLYRTRVSD 604
Query: 183 SFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSG 236
F+ ILV++DV++RG++ P V+ V+ LP D + Y+HR+GRTGR GK G
Sbjct: 605 EFRESRRSILVSSDVSARGMNYPDVTLVIQVGLPTDREQYIHRLGRTGREGKDG 658
>29912.m005374 dead box ATP-dependent RNA helicase, putative
Length = 764
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 138/266 (51%), Gaps = 12/266 (4%)
Query: 2 RNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDM 61
R L GV ++V TPGR+ DM+ R + +K LDEAD ML GF+ QI I Q +
Sbjct: 504 RILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL-- 561
Query: 62 PPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQ-RVELVQDVDKRN 120
P + Q +FSAT P E + F++ + + V R + + I Q V + ++ K
Sbjct: 562 --PSKIQVGVFSATMPPEALEITRKFMNKPVKILVKRDELTLEGIKQFHVNVEKEEWKLE 619
Query: 121 HLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERA 180
L +L + +++FV T+R D L + A HGD Q R+
Sbjct: 620 TLCDLYETLAITQ-------SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDII 672
Query: 181 LKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATA 240
++ F+ G + +L+ TD+ +RG+D+ VS V+N+DLP ++Y+HRIGR GR G+ G+A
Sbjct: 673 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRGGRFGRKGVAIN 732
Query: 241 FFSDKNIPLAKALVELMKEVNQEVPS 266
F + + + + + V +E+PS
Sbjct: 733 FVTRDDERMLFDIQKFYNVVVEELPS 758
>29706.m001331 dead box ATP-dependent RNA helicase, putative
Length = 413
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 140/267 (52%), Gaps = 14/267 (5%)
Query: 2 RNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDM 61
R L+ GV ++V TPGR+ DM+ R + +K LDEAD ML GF+ QI I Q +
Sbjct: 153 RILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL-- 210
Query: 62 PPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNH 121
P + Q +FSAT P E + F++ + + V R + + I Q +V+K
Sbjct: 211 --PAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ---FYVNVEKEEW 265
Query: 122 LMELLHAQKASGNHGKRALT--LVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERER 179
+E L + A+T ++FV T+R D L + A HGD Q R+
Sbjct: 266 KLETL-----CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDI 320
Query: 180 ALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLAT 239
++ F+ G + +L+ TD+ +RG+D+ VS V+N+DLP ++Y+HRIGR GR G+ G+A
Sbjct: 321 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRGGRFGRKGVAI 380
Query: 240 AFFSDKNIPLAKALVELMKEVNQEVPS 266
F + + + + + V +E+PS
Sbjct: 381 NFVTRDDERMLFDIQKFYNVVIEELPS 407
>30078.m002234 dead box ATP-dependent RNA helicase, putative
Length = 503
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 143/278 (51%), Gaps = 29/278 (10%)
Query: 10 ILVATPGRLVDMIERGRVSLGMVKYLALDEADRML-DMGFEPQIRKIVQQMDMPPPGERQ 68
+++ TPG + ++ ++S+ +K L DEAD+ML GF+ +I++ + P Q
Sbjct: 225 VVIGTPGTIKKLLSLRKLSISDMKVLVFDEADQMLAKEGFQDDSLRIMKDIQRFSPS-CQ 283
Query: 69 TMLFSATFPHEIQSLASDFL---SDYIFLTVGRVGSSTDLIAQ-RV----ELVQDVDKRN 120
+ FSATF ++++ S + S+ +F V + S D + Q +V E+ + + ++
Sbjct: 284 VLFFSATFNEDVKNFVSRVVKQGSNQLF--VKKEELSLDAVKQYKVYCPDEMAKVLVIKD 341
Query: 121 HLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERA 180
++EL K T++FV+T+R A L L G+ IHG +R++
Sbjct: 342 RILELAE---------KLGQTIIFVKTRRSASMLHQALVDLGYEVTTIHGALNVEDRDKI 392
Query: 181 LKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLP-------KDIDDYVHRIGRTGRAG 233
+K FK G+T +L++TDV +RG D V+ V+N+DLP D + Y+HRIGR GR G
Sbjct: 393 VKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKYGTSEPDYEVYLHRIGRAGRFG 452
Query: 234 KSGLATAFFS-DKNIPLAKALVELMKEVNQEVPSWLSQ 270
+ G F D + + + + E+PSW S+
Sbjct: 453 RKGAVFNFVMFDSDSTIMEKIDRYFGTRVTEIPSWNSE 490
>28966.m000526 dead box ATP-dependent RNA helicase, putative
Length = 590
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 121/245 (49%), Gaps = 22/245 (8%)
Query: 6 KGVDILVATPGRLVDMIERGRVSL-GMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 64
KGV++LVATPGRL+D ++ + + +K L +DEADR+L+ FE ++++I++ + P
Sbjct: 225 KGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKIL----P 280
Query: 65 GERQTMLFSATFPHEIQSLAS---DFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNH 121
RQT LFSAT +++ LA YI + GR + + + Q +V +
Sbjct: 281 KSRQTALFSATQTKKVEDLARLSFQITPVYIDVDDGRTKVTNEGLQQGYCVVHSAKRFIL 340
Query: 122 LMELLHAQKASGNHGKRALT---LVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERE 178
L L KR L+ +VF + L IHG + Q +R
Sbjct: 341 LYSFL----------KRNLSKKVMVFFSSCNSVKFHSELLRYIQVECFDIHGKQKQQKRT 390
Query: 179 RALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRA-GKSGL 237
F IL+ TDVA+RGLDIP V +V +D P + +Y+HR+GRT R G G
Sbjct: 391 TTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGN 450
Query: 238 ATAFF 242
A F
Sbjct: 451 ALLFL 455
>29863.m001062 dead box ATP-dependent RNA helicase, putative
Length = 406
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 138/266 (51%), Gaps = 12/266 (4%)
Query: 2 RNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDM 61
R L GV ++V TPGR+ DM+ R + +K LDEAD ML GF+ QI I Q +
Sbjct: 145 RILRAGVHVVVGTPGRVFDMLRRQSLPADYIKMFVLDEADEMLSRGFKDQIYDIFQFL-- 202
Query: 62 PPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQR-VELVQDVDKRN 120
P + Q +FSAT P E + F++ + + V R + + I Q V + +D K
Sbjct: 203 --PAKVQVGVFSATMPPEALDITRKFMNKPVRILVKRDELTLEGIKQYYVHVDKDEWKLE 260
Query: 121 HLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERA 180
L +L A +++FV T+R D L + A HGD Q +
Sbjct: 261 TLCDLYETLPI-------AQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNASDVI 313
Query: 181 LKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATA 240
++ F+ G + +L+ATD+ +RG+D+ VS V+N+DL ++Y+HRIGR GR G+ G+A
Sbjct: 314 MREFRSGSSRVLIATDLLARGIDVQQVSLVINYDLTTQPENYLHRIGRGGRFGRKGVAIN 373
Query: 241 FFSDKNIPLAKALVELMKEVNQEVPS 266
F + ++ + + + V QE+P+
Sbjct: 374 FVTKEDDRMLFEIQKFYNMVIQELPA 399
>29666.m001435 dead box ATP-dependent RNA helicase, putative
Length = 753
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 123/258 (47%), Gaps = 22/258 (8%)
Query: 8 VDILVATPGRLVD-MIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGE 66
++ILV TPGRL+ M E ++ L LDEADR+LD+GF+ + I+ Q+ P
Sbjct: 188 LNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQI----PKY 243
Query: 67 RQTMLFSATFPHEIQSLASDFLSD--YIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLME 124
RQT+LFSAT +Q LA L D Y+ + ++ + + Q +V K + L
Sbjct: 244 RQTLLFSATQTKSVQDLARLSLKDPEYVGVHEKSDTATPNRLQQTAMVVPLEQKLDMLWS 303
Query: 125 LLHAQKASGNHGKRALTLVFVETKRGADALEHWLSR--SGFPAIAIHGDKVQVERERALK 182
+ A S LVF+ + + + + G P +HG Q +R
Sbjct: 304 FIKAHLNSN-------ILVFLSSCKQVKFVYEAFKKLHPGIPLKCLHGRMKQGKRMVIYS 356
Query: 183 SFKIGVTPILVATDVASRGLDIPH-VSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAF 241
F +L +TDVA+RGLD V VV D P+D+ Y+HR+GRT R G + F
Sbjct: 357 QF-CEQRSVLFSTDVAARGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYQSGGRSVLF 415
Query: 242 FSDKNIPLAKALVELMKE 259
+P ++E ++E
Sbjct: 416 L----LPSEMKMLEKLQE 429
>30190.m011157 dead box ATP-dependent RNA helicase, putative
Length = 595
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 127/306 (41%), Gaps = 60/306 (19%)
Query: 10 ILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQM---------- 59
I+V TPGR+ ++ G++ +YL LDE D +L F + +I+ +
Sbjct: 280 IIVGTPGRISEISAAGKLHTHGCRYLVLDEVDELLSFNFREDVHRILDHVGRRSNADSHG 339
Query: 60 ---DMPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRVGSSTDLIAQR------- 109
+ RQT+L SAT P + A + D + + V + A R
Sbjct: 340 PNSQLARRAARQTILVSATVPFSVIRAARSWGHDPLLVQAKTVIPLESVPASRPVNASGP 399
Query: 110 ----------------------------VELVQDVDKRNHLMELLHAQKASGNHGKRALT 141
V +Q K + L +HA A +++
Sbjct: 400 ISSSSSNSNPQPQAAIQSLPPALKHYYCVTRIQH--KVDTLRRCVHALDA------KSVI 451
Query: 142 LVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKSFKIGVTPILVATDVASRG 201
+T++ DA+ +R G A +HGD ++ R LK FK G +LV ++++RG
Sbjct: 452 AFMNQTRQLKDAVFKLEAR-GMKAAELHGDLGKLSRSTILKKFKNGEVRVLVTNELSARG 510
Query: 202 LDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFSDKNIPLAKALVELMKEVN 261
LD+P VVN DLP D Y HR GRTGR G+ G + + + K ++ K++
Sbjct: 511 LDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVTICEESEVFVVK---KMQKQLG 567
Query: 262 QEVPSW 267
+P+
Sbjct: 568 ITIPTC 573
>29633.m000896 dead box ATP-dependent RNA helicase, putative
Length = 603
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 4 LEKGVDILVATPGRLVDMIER-GRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQM--- 59
L KG+ ILVATPGRL+D ++ S ++++ DEADR+L++GF +I I+ +
Sbjct: 154 LRKGISILVATPGRLLDHLKNTSSFSHTNLRWIIFDEADRILELGFGKEIEDILDLLGSR 213
Query: 60 -----------DMPPPGERQTMLFSATFPHEIQSLASDFLSDYIFLTV------------ 96
+RQ +L SAT ++ LA+ L + + + +
Sbjct: 214 LTRSVGKGNRDSSISNYQRQNLLLSATLNEKVNHLANISLENPVMIGLDDEKMQPEPLLE 273
Query: 97 -----------------GRVGSSTDLIAQRVELVQ---DVDKRNHLMELLHAQKASGNHG 136
+ ST V+LVQ V + L LL K
Sbjct: 274 HTKSLKSDADDELEHPSKVLKPSTGDFKVPVQLVQKYVKVPCGSRLATLLSILKHLFEKR 333
Query: 137 KRALTLVFVETKRGADALEHWLSRSGFPAIA-----------------IHGDKVQVERER 179
+VF T D LS F + +HG+ Q +R
Sbjct: 334 ASQKIVVFFSTCDAVDFHYSLLSEFRFSCTSQSEAEAAEMFLRCKTFRLHGNMKQEDRRD 393
Query: 180 ALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLAT 239
++FK +L++TDVA+RGLD+P V+ ++ +D P + +YVHR+GRT R G+ G +
Sbjct: 394 TFQAFKSDKLALLLSTDVAARGLDLPKVTWIIQYDTPGEATEYVHRVGRTARMGEKGDSL 453
Query: 240 AFF 242
F
Sbjct: 454 LFL 456
>29889.m003424 dead box ATP-dependent RNA helicase, putative
Length = 594
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 48/285 (16%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRML-DMGFEPQIRKIVQQM 59
NLE+GV++L+ATPGR + +++ G + L +K LDE D + D FE ++ ++
Sbjct: 309 LENLEQGVNVLIATPGRFMFLVKEGFLKLSNLKCAVLDEVDVLFNDEEFEVALKSLMNA- 367
Query: 60 DMPPPGERQTMLFSATFP----HEIQSLASDF--------------LSDYIFLTVGRVGS 101
P Q + +AT P +++ + D L + + G +G+
Sbjct: 368 ---SPVRSQYLFVTATLPVGVYNKLIEIFPDCGVVMGPGMHRTSARLEEVLVDCSGEIGA 424
Query: 102 ----STDLIAQRVELVQDVDKRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHW 157
T + ++ L+Q V++R L ++ K +ET R + +
Sbjct: 425 DRTPETAFLNKKSALLQVVEQRPVLKSIVFCNK--------------IETCRKVENVLKR 470
Query: 158 LSRSG--FPAIAIHGDKVQVERERALKSFKI----GVTPILVATDVASRGLDIPHVSHVV 211
R G + H Q R +K F + LV TD ASRG+D V HV+
Sbjct: 471 FDRKGTRIRVLPFHSAMAQESRLANMKEFTKPHSGKYSLFLVCTDRASRGIDFVGVDHVI 530
Query: 212 NFDLPKDIDDYVHRIGRTGR-AGKSGLATAFFSDKNIPLAKALVE 255
FD P+D +YV R+GRT R A G A F K + LA+ ++E
Sbjct: 531 LFDFPRDPSEYVRRVGRTARGANGKGKAFIFVVGKQVSLAQKIME 575
>29724.m000854 dead box ATP-dependent RNA helicase, putative
Length = 254
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 163 FPAIAIHGDKVQVERERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDY 222
F A+HGD Q +RER L F+ G ILVATDVA+RGLD+P+V V+++ LP + +
Sbjct: 5 FRCEALHGDISQSQRERTLSGFRSGSFNILVATDVAARGLDVPNVDLVIHYALPNCSETF 64
Query: 223 VHRIGRTGRAGKSGLA 238
VHR GRTGRAGK G A
Sbjct: 65 VHRSGRTGRAGKKGTA 80
>58840.m000017 dead box ATP-dependent RNA helicase, putative
Length = 135
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 66/115 (57%)
Query: 151 ADALEHWLSRSGFPAIAIHGDKVQVERERALKSFKIGVTPILVATDVASRGLDIPHVSHV 210
D L + + F ++HGD Q ER+ + F+ G T +L+ TDV +RGLD+ V V
Sbjct: 14 VDWLTEKMRNNNFTVSSMHGDMPQKERDAIMGEFQSGTTRVLITTDVWARGLDVQQVFLV 73
Query: 211 VNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFSDKNIPLAKALVELMKEVNQEVP 265
+N+DLP + + Y+HRIGR+GR G+ G+A F +I + + + + E+P
Sbjct: 74 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVRSDDIKILRDMEQYYSTQIDEMP 128
>29736.m002120 dead box ATP-dependent RNA helicase, putative
Length = 550
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 141 TLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKSFKIGVTPILVATDVASR 200
T+VF T +A+ L R+G H D ER L F+ I V TD A+R
Sbjct: 427 TMVFANTVDAVEAVVKILERAGIECYRYHKDTSLEERAETLVDFR-EKGGIFVCTDAAAR 485
Query: 201 GLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFSDKNIPLAKALVELMK 258
G+D+P+VSHV+ D D++HR+GRT RAG+ GL T+ ++D N L A+ + K
Sbjct: 486 GVDVPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTDSNRDLVHAIRQAKK 543
>29724.m000855 dead box ATP-dependent RNA helicase, putative
Length = 323
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMD 60
+ L+ GVD++V TPGR++D+++RG ++L ++++ LDEAD+ML +GF I I Q++
Sbjct: 213 MKELDYGVDVVVGTPGRIIDLMKRGSLNLSEIQFVVLDEADQMLGVGFVDDIETIFQRL- 271
Query: 61 MPPPGERQTMLFSATFPHEIQSLASDFLSD 90
P R +MLFSAT P I++L ++L D
Sbjct: 272 ---PKNRHSMLFSATMPSWIKNLVRNYLKD 298
>29591.m000142 dead box ATP-dependent RNA helicase, putative
Length = 469
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 119/262 (45%), Gaps = 25/262 (9%)
Query: 1 FRNLEKGVDILVATPGRLVDMIERGR-VSLGMVKYL-ALDEADR-MLDMGFEPQIRKIVQ 57
+ L+ VDILVATPGRL+D I + +L + YL LD R L + F P I IV
Sbjct: 170 MQELQTSVDILVATPGRLMDHITNTKGFTLEHLCYLHLLDSLTRSTLLLRFLPII--IVL 227
Query: 58 QMDMPPPGER-------QTMLFSATFPHEIQSLASDFLSDYIFLTVG--RVGSSTDLIAQ 108
+ G + M+ SAT + L L +FLT G R L +
Sbjct: 228 KDSSVERGFKGKSYPRLAKMVLSATLTQDPSKLVQLDLHHPLFLTTGQSRYQLPEKLESY 287
Query: 109 RVELVQDVDKRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAI 168
RV + + K +L+ LL Q G +VF + L L G + I
Sbjct: 288 RV-ICEPKLKPLYLVALL--QNLVGEK-----CIVFASSVESTHRLCTLLKFFGDLKVKI 339
Query: 169 H---GDKVQVERERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHR 225
G + Q R + LK+F+ G +LV++D +RG+D+ V +V+N+D P I Y+HR
Sbjct: 340 KEYSGLQHQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVRNVINYDKPAYIKTYIHR 399
Query: 226 IGRTGRAGKSGLATAFFSDKNI 247
GRT RAG+ G + +
Sbjct: 400 AGRTARAGQVGRCFTLLHKEEV 421
>29825.m000333 dead box ATP-dependent RNA helicase, putative
Length = 616
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 52/277 (18%)
Query: 9 DILVATPGRLVDMIERGRVSLGMV----KYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 64
DIL+++P L + G + + + L LDEAD +L G+E +R + + P
Sbjct: 165 DILISSPASLAKCLSVGLLQSASINDSLEILVLDEADLLLSFGYEDDLRALTALI----P 220
Query: 65 GERQTMLFSATFPHEIQSLASDFLSDYIFLTVGRV-GSSTDLIAQRVEL----VQDVDKR 119
Q +L SAT ++ L L + LT+ V G+ + I + V+ DK
Sbjct: 221 RRCQCLLMSATSSDDVDKLKKLMLHNPYILTLPEVEGNKDEAIPKNVQQFWISCSGRDKL 280
Query: 120 NHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERER 179
H++ LL L+F + + L +L + G + ++ + Q R
Sbjct: 281 VHILALLKLDLVQKK------VLIFTNSIDMSFRLRLFLEKFGIKSAILNAELPQNSRLH 334
Query: 180 ALKSFKIGVTPILVATDVAS---------------------------------RGLDIPH 206
L+ F G+ L+ATD + RG+D +
Sbjct: 335 ILEEFNAGLFDYLIATDDSETKEKEQEQADRNLAQSRKSKKSKQKLDSEFGVVRGIDFKN 394
Query: 207 VSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFS 243
V VVN+D+P + YVHRIGRTGR SG + + S
Sbjct: 395 VHTVVNYDMPLNAAGYVHRIGRTGRGYNSGSSVSLVS 431
>29844.m003347 dead box ATP-dependent RNA helicase, putative
Length = 476
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 10 ILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFE-PQIRKIVQQMDMPPPGERQ 68
I+VAT L M+E+ L ++ L +DE D M + + +RK++ RQ
Sbjct: 207 IVVATIASLCQMLEKHIFKLDSMQVLVIDEVDFMFNSSKQVSSLRKLLTSYS--SCNSRQ 264
Query: 69 TMLFSATFPHEIQSLASDFL-----SDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLM 123
T+ SA+ P + L SD + + + V + R + + L+
Sbjct: 265 TVFASASIPQHRRFLYDCIQQKWTKSDAVHVHINPVQPMPSCLQHRFVICSKNQRHQILL 324
Query: 124 ELLHA----------------QKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIA 167
LL K +G+ L + F+ET S S I
Sbjct: 325 SLLQCDAPKSGIVFVGEQSEKSKKAGHAPPTTLLVDFLET-----------SYSDCSDIL 373
Query: 168 IHGDKVQVE-RERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRI 226
+ + + R +L K G +LVATD+A+RG+D+P +H+ NF+LP+ DY+HR
Sbjct: 374 LLEEDMNFNLRAASLSEVKQGGGYLLVATDIAARGVDLPETTHIYNFELPRTAVDYLHRA 433
Query: 227 GRTGR 231
GRTGR
Sbjct: 434 GRTGR 438
>45483.m000014 dead box ATP-dependent RNA helicase, putative
Length = 105
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%)
Query: 182 KSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAF 241
K FK G ILVATD+ RG+DI V+ V+N+D+P D Y+HR+GR GR G GLA F
Sbjct: 10 KGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 69
Query: 242 FS 243
S
Sbjct: 70 VS 71
>29904.m003054 dead box ATP-dependent RNA helicase, putative
Length = 284
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 179 RALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLA 238
+A+ F+ ILVATDVA+RGLDIP V VV++ LP + YVHR GRT RA G +
Sbjct: 2 QAIDRFRSNEHGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARAFTDGCS 61
Query: 239 TAFFSDKNIPLAKALVE-LMKEVNQEVP 265
A S + +L + KE Q P
Sbjct: 62 IALISSSDTSKFASLCKSFSKESFQRFP 89
>29428.m000333 dead box ATP-dependent RNA helicase, putative
Length = 493
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 115/264 (43%), Gaps = 28/264 (10%)
Query: 9 DILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGERQ 68
+ LV+TP RL+++I + + V +L +D D + G ++ I Q + G
Sbjct: 243 EFLVSTPERLMELISLKAIDITGVSFLVVDGLDSLYQDGSLGSLKSIRQSIS----GNPH 298
Query: 69 TMLFSATFPHE-IQSLASDFLSDYIFLTVGRVGSSTDLIAQRVELVQDVDKRNHLMELLH 127
T+ F+ F H + +L + F+ ++ R+ S + +Q + Q ++
Sbjct: 299 TVAFNNLFNHACVPALQNLFVG-----SINRLSLSDSICSQSACIFQTIEVCTS-----E 348
Query: 128 AQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKSFKIG 187
+K S R L VE + A +L L +G+ V E + +
Sbjct: 349 QKKLSKLCSHRLKLLFIVENNKKAASLVKILKSNGY--------SVSTESNCEVSNVDTR 400
Query: 188 VTPILV---ATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFSD 244
+ P++ A +++ L + + + NF L ID+Y+ + R R G+ +F ++
Sbjct: 401 MKPVVSVINAEHISTADLGVYEIIILPNFVL--SIDNYIQILTRMARHTTHGILHSFMTE 458
Query: 245 KNIPLAKALVELMKEVNQEVPSWL 268
++ LA L+E++++ Q VP L
Sbjct: 459 EDALLAGPLIEILEQCGQAVPETL 482
>29848.m004638 dead box ATP-dependent RNA helicase, putative
Length = 275
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 10 ILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGERQT 69
I+V TPGR++ + +SL V++ LDE D+ML+ +R+ VQ++ P ++Q
Sbjct: 170 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQV 226
Query: 70 MLFSATFPHEIQSLASDFLSD 90
M+FSAT EI+ + F+ D
Sbjct: 227 MMFSATLSKEIRPVCKKFMQD 247
>29929.m004728 rothmund-thomson syndrome DNA helicase recq4,
putative
Length = 852
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 142 LVFVETKRGADALEHWLSRSGFPAIAIHGDKVQVERERALKSFKIGVTPILVATDVASRG 201
+V+ + + D + +L + A + H + +R R + F ++VAT G
Sbjct: 479 IVYCKFQSETDIISRYLCDNNISAKSYHSAILSKDRSRIQELFCSNKIRVVVATVAFGMG 538
Query: 202 LDIPHVSHVVNFDLPKDIDDYVHRIGRTGRAGKSGLATAFFSD 244
LD V V+++ LP+ +++YV IGR GR G+ FF D
Sbjct: 539 LDKSDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFFDD 581
>29907.m000626 conserved hypothetical protein
Length = 795
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 113 VQDVDKRNHLMELLHAQKASGNHGKRALTLVFVETKRGADALEHWLSRSGFPAIAIHGDK 172
V+ ++ + M+ L Q+ S G T+++ T + + + L ++G A HG
Sbjct: 204 VKHFNRGSQFMDEL-VQEISKFVGNGDSTIIYCTTVKDVEQVFQLLQQAGIRAGIYHGQM 262
Query: 173 VQVERERALKSFKIGVTPILVATDVASRGLDIPHVSHVVNFDLPKDIDDYVHRIGRTGRA 232
RE + KSF ++VAT G+D P++ V+++ PK ++ Y GR GR
Sbjct: 263 GNKAREESHKSFIRDELHVMVATIAFGMGIDKPNIRQVIHYGCPKSLESYYQESGRCGRD 322
Query: 233 GKSGLATAFFS 243
G + +++
Sbjct: 323 GIPSVCWLYYT 333
>28644.m000900 dead box ATP-dependent RNA helicase, putative
Length = 357
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 8 VDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFEPQIRKIVQQM 59
+ +L+ TP +V IE G ++ +KYL LD AD M D GF P+I +I+ +
Sbjct: 227 IGMLIGTPFEVVQQIEEGSIATDDIKYLVLDNADAMFDNGFGPEISRIISSL 278