Jatropha Genome Database

JcCA0292601.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0292601.20 + phase: 0 /partial
         (402 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29976.m000497 transcription factor, putative                          579   e-166
29915.m000469 transcription factor, putative                          375   e-104
29917.m001969 transcription factor, putative                          216   2e-56
30131.m006860 conserved hypothetical protein                           88   8e-18
30204.m001803 Abscisic acid-insensitive protein, putative              80   2e-15
30190.m010868 hypothetical protein                                     77   1e-14
30076.m004471 hypothetical protein                                     69   3e-12
30068.m002615 transcription factor, putative                           69   5e-12
29738.m001050 DNA-binding protein RAV1, putative                       68   8e-12
30032.m000462 transcription factor, putative                           67   2e-11

>29976.m000497 transcription factor, putative
          Length = 861

 Score =  579 bits (1492), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 289/408 (70%), Positives = 314/408 (76%), Gaps = 6/408 (1%)

Query: 1   MFFVILTNVICTIRSPVHWKQG---SEGKTALAYGYLHRDFLRLVYCDTYHLEESGWREC 57
           M   I  N  C +     W++G     G  AL        +   VYCDT+HLEE GWREC
Sbjct: 1   MGSKICMNASCGVTKTHEWRRGWTLRSGGYALLCYTCGSAYENSVYCDTFHLEEPGWREC 60

Query: 58  YISEKRLHCGCIASKSLLQLLDFGGVGCTSCAKNYRLHPIRSDEIPNGFG-LLINNACDL 116
           Y   KRLHCGCIASKSL +LLD+GGV CT C K+ +LH I  DEIP GFG L +NNA D 
Sbjct: 61  YNCNKRLHCGCIASKSLFELLDYGGVECTGCVKSSQLHSIHGDEIPKGFGSLTLNNAGDP 120

Query: 117 ESTPLENRVAGRTFDEGKLAQLCRLMEANAPNLLCQSEGADTNAGLGQFRQEEVMHQIVE 176
           +S PLENR      D+G+LAQLCRLMEAN P LLCQSEGADTNAGLGQFRQEEVMH I E
Sbjct: 121 DSIPLENRATNGALDDGRLAQLCRLMEANEPQLLCQSEGADTNAGLGQFRQEEVMHPIGE 180

Query: 177 XXXXXXXXXXXXXXXXX--XXXPSILDMRDIHGSHAQPSLSMSMGAPSGTASFAPYPCGV 234
                                  SILDMRD+HGSHAQPSL+M++GAPSGT SF  Y CG 
Sbjct: 181 AGTSFSIASQSSVVPSKFPNGGRSILDMRDMHGSHAQPSLNMALGAPSGTTSFIQYACGA 240

Query: 235 VEGKEQSKTSPFQQGQRSRPILPKPSKPVLAGSSETNKAAVSELRIARPPAEGRGKNQLL 294
           V+G+EQ KT PF QGQRSRPILPKPSK   +GSS+TNK AV+ELRIARPPAEGRGKNQLL
Sbjct: 241 VDGREQGKTPPFLQGQRSRPILPKPSKTGFSGSSDTNKTAVTELRIARPPAEGRGKNQLL 300

Query: 295 PRYWPRITDQELQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSE 354
           PRYWPRITDQELQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSE
Sbjct: 301 PRYWPRITDQELQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSE 360

Query: 355 GLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT 402
           GLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEGVTPCIQ+M+L+AGDT
Sbjct: 361 GLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEGVTPCIQAMKLRAGDT 408


>29915.m000469 transcription factor, putative
          Length = 891

 Score =  375 bits (962), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/418 (49%), Positives = 260/418 (62%), Gaps = 32/418 (7%)

Query: 8   NVICTIRSPVHWKQG---SEGKTALAYGYLHRDFLRLVYCDTYHLEESGWRECYISEKRL 64
           N +C   S   W++G     G  AL        + +  +CD +H ++SGWREC    KRL
Sbjct: 9   NALCGATSN-DWRKGWPLRSGDFALLCDNCGTAYEQSTFCDLFHSKDSGWRECVSCGKRL 67

Query: 65  HCGCIASKSLLQLLDFGGVGCTSCAKNYRLHPIRS-------------DEIPNGFGL-LI 110
           HCGCIAS+ LL+LLD GGV C +C K+  ++ + S             DE PNGFG+  +
Sbjct: 68  HCGCIASRFLLELLDGGGVNCINCIKSSGINSVSSNHLYGLANLFYVWDEKPNGFGMSKL 127

Query: 111 NNACDLESTPLENRVAGRTFDEGKLAQLCRLMEANAPNLLCQSEGADTNAGLGQFRQEEV 170
           +N  +L+S+  +  V      E K  +L    E  A   L Q +  +T+    Q +QE+ 
Sbjct: 128 DNVSELQSSDNQLDV------ERKFLRLGNSTEVIATRHLLQLQNDETSVSFRQMKQEDN 181

Query: 171 MHQIVEXXXXXXXXXXXXX-----XXXXXXXPSILDMRDIHGSHAQPSLSMSMGAPSGTA 225
              + E                          + +  ++++ S  Q +LS+++G+  G  
Sbjct: 182 FPPVGEIGSTSFSNLNQASNGLSLTAKPETRKATIAAKELYESLTQTNLSITLGSTFGNP 241

Query: 226 SFAPYPCGVVEGKEQSK-TSPFQQGQRSRPILPKPSKPVLAGSSETNKAAVSELRIARPP 284
              P+P  VV+ + QSK +SP QQG R R +LPKP K  L    ETN   VS++R+ARPP
Sbjct: 242 --IPFPGAVVDERTQSKASSPLQQGSRCRHLLPKPPKSALVTGLETNAGMVSQIRVARPP 299

Query: 285 AEGRGKNQLLPRYWPRITDQELQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAE 344
           AEGRG+NQLLPRYWPRITDQELQQ+S D NS IVPLFEKVLSASDAGRIGRLVLPKACAE
Sbjct: 300 AEGRGRNQLLPRYWPRITDQELQQISADSNSTIVPLFEKVLSASDAGRIGRLVLPKACAE 359

Query: 345 AYFPPISQSEGLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT 402
           AYFPPISQ EGLPLRIQDVKG+EW FQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT
Sbjct: 360 AYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT 417


>29917.m001969 transcription factor, putative
          Length = 854

 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 97/126 (76%), Positives = 110/126 (87%)

Query: 276 SELRIARPPAEGRGKNQLLPRYWPRITDQELQQLSGDLNSNIVPLFEKVLSASDAGRIGR 335
           + +R  RP  + R ++QLLPRYWPR TD+ELQQ+SG+ NS I PLFEK+LSASDAGRIGR
Sbjct: 280 THIRNGRPRVDARARSQLLPRYWPRFTDEELQQISGNSNSVITPLFEKMLSASDAGRIGR 339

Query: 336 LVLPKACAEAYFPPISQSEGLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEGVTPCIQSM 395
           LVLPK CAEAYFPPIS  EGLPL++QD KGREW FQFRFWPNNNSRMYVLEGVTPCIQ+M
Sbjct: 340 LVLPKKCAEAYFPPISHPEGLPLKVQDAKGREWIFQFRFWPNNNSRMYVLEGVTPCIQNM 399

Query: 396 QLQAGD 401
           +LQAGD
Sbjct: 400 RLQAGD 405



 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 33/48 (68%)

Query: 43  YCDTYHLEESGWRECYISEKRLHCGCIASKSLLQLLDFGGVGCTSCAK 90
           +CDT+HL  +GWR C    KR+HCGCI S +   LLD GG+ C +CA+
Sbjct: 54  FCDTFHLNATGWRCCESCGKRVHCGCIVSNNAFMLLDAGGIECMACAR 101


>30131.m006860 conserved hypothetical protein
          Length = 321

 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 11/109 (10%)

Query: 294 LPRYWPRITDQELQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQS 353
           LP +  R+ DQ  ++LS         LF+K L  SD   + R+VLPK  AEA+ P +   
Sbjct: 115 LPSFPARVIDQ--RRLSF--------LFQKELKNSDVSSLKRMVLPKKAAEAHLPVLESK 164

Query: 354 EGLPLRIQDVKGRE-WTFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGD 401
           EG+ + + D+ G   W+F++R+WPNNNSRMYVLE     + +  LQ GD
Sbjct: 165 EGIFISMDDLDGLHVWSFKYRYWPNNNSRMYVLENTGDFVNTHGLQLGD 213


>30204.m001803 Abscisic acid-insensitive protein, putative
          Length = 551

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 3/89 (3%)

Query: 316 NIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDV-KGREWT--FQF 372
           N+  L +KVL  SD G +GR+VLPK  AE + P +   +G+ + ++D+   R W   + F
Sbjct: 404 NLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYSF 463

Query: 373 RFWPNNNSRMYVLEGVTPCIQSMQLQAGD 401
           RFWPNN SRMY+LE     +++  LQ GD
Sbjct: 464 RFWPNNKSRMYLLENTGDFVRTNGLQEGD 492


>30190.m010868 hypothetical protein
          Length = 418

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 314 NSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDV-KGREWTFQF 372
           N  +  L  K L  SD G +GR+VLPK  AE   P +S  EG+ + I+DV   +EW+ ++
Sbjct: 159 NKKLRVLLRKDLKTSDVGSLGRIVLPKREAEENLPILSDKEGILVAIRDVCSTKEWSLKY 218

Query: 373 RFWPNNNSRMYVLEGVTPCIQSMQLQAGDT 402
           ++W NN SRMYVLE     ++   ++ GD+
Sbjct: 219 KYWSNNKSRMYVLENTGDFVKQNGMRIGDS 248


>30076.m004471 hypothetical protein
          Length = 450

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 5/85 (5%)

Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQS--EGLPLRIQDVKGREWTFQFRFWPN 377
           +F+KV++ SD G++ RLV+PK  AE YFP  S S  +GL L  +D  G+ W F++ +W  
Sbjct: 124 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYW-- 181

Query: 378 NNSRMYVL-EGVTPCIQSMQLQAGD 401
           N+S+ YV+ +G +  ++  +L AGD
Sbjct: 182 NSSQSYVMTKGWSRFVKEKKLDAGD 206


>30068.m002615 transcription factor, putative
          Length = 406

 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 5/85 (5%)

Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQS--EGLPLRIQDVKGREWTFQFRFWPN 377
           +F+KV++ SD G++ RLV+PK  AE YFP  S +  +GL L  +D  G+ W F++ +W  
Sbjct: 102 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNDKGLLLNFEDKTGKAWRFRYSYW-- 159

Query: 378 NNSRMYVL-EGVTPCIQSMQLQAGD 401
           N+S+ YV+ +G +  ++  +L AGD
Sbjct: 160 NSSQSYVMTKGWSRFVKDKKLDAGD 184


>29738.m001050 DNA-binding protein RAV1, putative
          Length = 371

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 6/86 (6%)

Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQS---EGLPLRIQDVKGREWTFQFRFWP 376
           LFEK ++ SD G++ RLV+PK  AE +FP  S S   +G+ L  +D+ G+ W F++ +W 
Sbjct: 203 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSNSTKGVLLNFEDITGKVWRFRYSYW- 261

Query: 377 NNNSRMYVL-EGVTPCIQSMQLQAGD 401
            N+S+ YVL +G +  ++   L+AGD
Sbjct: 262 -NSSQSYVLTKGWSRFVKEKNLKAGD 286


>30032.m000462 transcription factor, putative
          Length = 373

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 5/85 (5%)

Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP--PISQSEGLPLRIQDVKGREWTFQFRFWPN 377
           +FEK L+ SD G++ RLV+PK  AE YFP    S  +GL L  +D  G+ W F++ +W  
Sbjct: 136 MFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSVDKGLLLSFEDELGKCWRFRYSYW-- 193

Query: 378 NNSRMYVL-EGVTPCIQSMQLQAGD 401
           N+S+ YVL +G +  ++  QL AGD
Sbjct: 194 NSSQSYVLTKGWSRYVKDKQLDAGD 218