Jatropha Genome Database

JcCA0291961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0291961.10 - phase: 0 /partial
         (158 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000800 hypothetical protein                                    274   1e-74
29680.m001714 conserved hypothetical protein                          206   3e-54
30174.m008689 conserved hypothetical protein                          125   9e-30
29693.m002029 conserved hypothetical protein                           57   5e-09
29729.m002400 conserved hypothetical protein                           56   7e-09
29669.m000798 f22g5.35, putative                                       55   1e-08
29726.m004027 conserved hypothetical protein                           49   8e-07
30128.m008810 conserved hypothetical protein                           49   1e-06
30169.m006230 conserved hypothetical protein                           49   1e-06

>30008.m000800 hypothetical protein
          Length = 472

 Score =  274 bits (701), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 132/159 (83%), Positives = 144/159 (90%), Gaps = 2/159 (1%)

Query: 1   MSR-VIPQPFQLLELNVISGQDLAQVSRKMRTYAVAWVHPERKLSTRLDIYSHNNPTWND 59
           MSR V   PFQLLELNVISGQDLAQVSRKMRTYAVAWVHP+RKLSTR+D   HNNPTWND
Sbjct: 1   MSRPVYSPPFQLLELNVISGQDLAQVSRKMRTYAVAWVHPDRKLSTRVDAQGHNNPTWND 60

Query: 60  KFVFRVDDEFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAE-HKKHQKHGVQL 118
           KFVFRVDDEFLY ETSAIM+EIYA+ WFRD+HVGTVRVIVGNLIPPA+ +++HQ+H VQL
Sbjct: 61  KFVFRVDDEFLYGETSAIMIEIYALHWFRDVHVGTVRVIVGNLIPPAQLYRQHQQHHVQL 120

Query: 119 GMRFVALQVRRRSGRPQGILNIGVAFLDASRKSMPLYTQ 157
           GMRFVALQVRR SGRPQGILNIGVA LD S +SMPLY+Q
Sbjct: 121 GMRFVALQVRRHSGRPQGILNIGVALLDTSMRSMPLYSQ 159


>29680.m001714 conserved hypothetical protein
          Length = 380

 Score =  206 bits (525), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 95/150 (63%), Positives = 115/150 (76%), Gaps = 7/150 (4%)

Query: 8   PFQLLELNVISGQDLAQVSRKMRTYAVAWVHPERKLSTRLDIYSHNNPTWNDKFVFRVDD 67
           PFQLLE+NVIS QDLA VS+ MRTYAV WVHPERKL+TR+D   H NP WN+KFVFRVDD
Sbjct: 7   PFQLLEINVISAQDLAPVSKSMRTYAVVWVHPERKLTTRVDQNGHTNPQWNEKFVFRVDD 66

Query: 68  EFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVALQV 127
            FL  ETS+IM+EIYA +W RD+ +G+VRV++ NL P   +   +       MRFVALQ+
Sbjct: 67  TFLNSETSSIMIEIYAAAWLRDVQIGSVRVLISNLFPSPTNNNSK-------MRFVALQI 119

Query: 128 RRRSGRPQGILNIGVAFLDASRKSMPLYTQ 157
           RR SGRPQGILN+GV  LD + +SMPLYT+
Sbjct: 120 RRPSGRPQGILNMGVQLLDNTMRSMPLYTE 149


>30174.m008689 conserved hypothetical protein
          Length = 265

 Score =  125 bits (314), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 88/142 (61%), Gaps = 9/142 (6%)

Query: 10  QLLELNVISGQDLAQVS---RKMRTYAVAWVHPERKLSTRLDIYSHNNPTWNDKFVFRVD 66
           ++LE+N+IS QDL   S   R+M+TYAV W+    KL TR+D     NPTWNDKF+F+V 
Sbjct: 5   KILEINLISAQDLKPPSASLRQMQTYAVVWLDSTAKLRTRIDRVGGENPTWNDKFLFKVT 64

Query: 67  DEFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVALQ 126
            E L RETS +  EIYAV  FRD  +GTVR ++  +  P+  K  +          +ALQ
Sbjct: 65  PEILSRETSGVSFEIYAVGCFRDPLIGTVRFLISTIPLPSPIKPTRTPSC------IALQ 118

Query: 127 VRRRSGRPQGILNIGVAFLDAS 148
           ++R SGR QG+LNIG   +D S
Sbjct: 119 IQRPSGRFQGVLNIGAMVIDGS 140


>29693.m002029 conserved hypothetical protein
          Length = 209

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 10/136 (7%)

Query: 12  LELNVISGQDLAQVSR--KMRTYAVAWVHPERKLS-TRLDIYSHNNPTWND--KFVFRVD 66
           +E+ +IS ++L  V    KM+ YA+ +V  +  ++ T +D +   +PTWN+  K +FR +
Sbjct: 25  IEVLIISAENLKNVKHVTKMKPYALVYVEKDLHVAKTHVDNHGGTDPTWNETVKVMFR-E 83

Query: 67  DEFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVALQ 126
           +       +A+ V+IYA    RD  VG+ RV++ +++          + +Q     + +Q
Sbjct: 84  NLLETNIIAALNVDIYAHGHVRDKPVGSARVLLCDVLKGGRPDVPVDNPIQC----MTVQ 139

Query: 127 VRRRSGRPQGILNIGV 142
           V R SGRPQG+L + V
Sbjct: 140 VWRPSGRPQGLLTLWV 155


>29729.m002400 conserved hypothetical protein
          Length = 378

 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 17/136 (12%)

Query: 12  LELNVISGQDLAQVSR--KMRTYAVAWVHPERKLSTRLDIYSHNNPTWNDKFVFRVDDEF 69
           +E+ +IS + L + S   K++ +AV W+ P  K  T++D   + NP W  KF   VDD  
Sbjct: 77  VEVCLISARGLRRTSSLWKLQWFAVGWIDPNNKYCTKIDPSGNANPIWKTKFATLVDDSN 136

Query: 70  LYRETSAIMVEIYAVS--WFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVALQV 127
              +  A+ VE+Y+    + R+   GT  V +   +  A+    ++ G        + Q+
Sbjct: 137 F--QDMALHVEVYSREPLFLRESLQGTATVALKEFL--AKTPGKEEVG--------SYQL 184

Query: 128 RRR-SGRPQGILNIGV 142
           RRR S +PQG ++I +
Sbjct: 185 RRRSSSKPQGFVDISI 200


>29669.m000798 f22g5.35, putative
          Length = 312

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 19/135 (14%)

Query: 15  NVISGQDLAQVSRK---MRTYAVAWVHPERKLSTRLDIYSHNNPTWNDKFVFRVDDEFLY 71
            ++S + L  V+ K   ++ YAV WV P+R+L+T+ D      P WN++F   +    L 
Sbjct: 17  TIVSAKHLKNVNWKNGDLKAYAVFWVDPDRRLATKSDDSGSTRPVWNERFTLPLS---LP 73

Query: 72  RETSAIMVEIY--AVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVALQVRR 129
              S   +EI+    S      VGT+RV + +L  P +             R    ++ R
Sbjct: 74  LHDSYFTLEIFHSKPSETPKPLVGTLRVGLKDLFDPDDS-----------TRIRTFELTR 122

Query: 130 RSGRPQGILNIGVAF 144
            SGRPQG + I + F
Sbjct: 123 PSGRPQGKIRIKIGF 137


>29726.m004027 conserved hypothetical protein
          Length = 283

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 26/148 (17%)

Query: 12  LELNVISGQDLAQVS--RKMRTYAVAWV-----HPERKLSTRLDIYSHNNPTWNDKFVFR 64
           LE+ +IS +DL  V+   KM  YAV  +      P++K  T +D     NPTWN    F 
Sbjct: 6   LEIKLISAKDLKDVNLFSKMDVYAVLSISGDSQQPKQKTKTPVDHDGGINPTWN----FP 61

Query: 65  VDDEFLYRETSA------IMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQL 118
              +F+  ET A      + +++       D  VG V V +  L+          +G   
Sbjct: 62  A--KFIIIETPAQQNRLNLDIKLRCERALGDKDVGEVHVPIKELL-------DSINGDGN 112

Query: 119 GMRFVALQVRRRSGRPQGILNIGVAFLD 146
            M+FV  QVR+ SG+ +G L+    F D
Sbjct: 113 SMQFVNYQVRKPSGKSKGELSFSFKFSD 140


>30128.m008810 conserved hypothetical protein
          Length = 279

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 18/149 (12%)

Query: 12  LELNVISGQDLAQVS--RKMRTYAVAWV-----HPERKLSTRLDIYSHNNPTWNDKFVFR 64
           LE+ +IS +D+  V+   KM  YA   +     + ++K  T +D     NPTWN    F 
Sbjct: 6   LEITLISAKDIKDVNMFSKMDVYAEVSIKGDHFNSKQKQKTPVDKDCGTNPTWNHSMKFN 65

Query: 65  VDDEFLYRETSAIMVEIYAVSWFRDIHVGTVRVIVGNLIPPAEHKKHQKHGVQLGMRFVA 124
           + +         + +++ +   F D  +G V V +  LI   +HK         G   V+
Sbjct: 66  IHEASAQENRLTVQIKLISDRSFGDKEIGEVHVPIKELI---DHK--------AGDANVS 114

Query: 125 LQVRRRSGRPQGILNIGVAFLDASRKSMP 153
             VR  SG+ +G LN    F +     +P
Sbjct: 115 YGVRTPSGKAKGSLNFSFKFGEKFEAPLP 143


>30169.m006230 conserved hypothetical protein
          Length = 265

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 28/144 (19%)

Query: 12  LELNVISGQDLAQVSRK---MRTYAVAWVHPERKLSTRLDIYSHNNPTWNDKFVF----- 63
           +E+++ S +DL  V+ +   +R YAV W+ P  K STR+D      P W+   V      
Sbjct: 7   VEVSISSAKDLKNVNWRHGLLRPYAVVWIDPNSKWSTRVDEEGDTCPFWDQILVIPLPPG 66

Query: 64  RVDDEFLYRETSAIMVEIYAVSWFRDIH--VGTVRVIVGNLIPPAEHKKHQKHGVQLGMR 121
            ++D  LY       +++   +   D    +G+ R+ +  ++            V +G R
Sbjct: 67  PIEDHTLY-------IDVVHANAEEDTKPLIGSARLKLSEVL----------DDVGIGQR 109

Query: 122 FV-ALQVRRRSGRPQGILNIGVAF 144
               LQ++R SGRPQG +++ V  
Sbjct: 110 LNRILQLKRPSGRPQGKMDVNVTI 133