Jatropha Genome Database

JcCA0291681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0291681.10 - phase: 0 
         (395 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29137.m000022 conserved hypothetical protein                          564   e-161
28162.m000124 conserved hypothetical protein                          355   2e-98
30184.m001167 conserved hypothetical protein                          142   2e-34
30063.m001446 conserved hypothetical protein                          126   2e-29
29439.m000215 conserved hypothetical protein                          107   7e-24
28863.m000092 ATP binding protein, putative                            58   8e-09

>29137.m000022 conserved hypothetical protein
          Length = 398

 Score =  564 bits (1453), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 295/403 (73%), Positives = 323/403 (80%), Gaps = 13/403 (3%)

Query: 1   MPTPVSVARQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSILRDACARAR 60
           MPTPVSVARQCLTDE               SHAQTTSLHAVSALLALPSS LRDACARAR
Sbjct: 1   MPTPVSVARQCLTDEAARALQDAVSVARRRSHAQTTSLHAVSALLALPSSTLRDACARAR 60

Query: 61  NSPCSSRLQFRALELCVGVSLDRLSSSKTLEEPPISNSLMAAIKRSQANQRRHPDNFHLQ 120
            SPCSSRLQFRALELCVGVSLDRL SSK L+EPPISNSLMAAIKRSQANQRRHPDNFHLQ
Sbjct: 61  KSPCSSRLQFRALELCVGVSLDRLPSSKALDEPPISNSLMAAIKRSQANQRRHPDNFHLQ 120

Query: 121 QIHCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIKLAIIHPPVTPQAAKFS 180
           QIHCNQQPPSVLKVELK+FILSILDDPIVSRVLGEAGFRSCDIKLAIIHPP+T Q  KFS
Sbjct: 121 QIHCNQQPPSVLKVELKHFILSILDDPIVSRVLGEAGFRSCDIKLAIIHPPIT-QPPKFS 179

Query: 181 RTRY-PPLFLYNLTGSDPVQPGLSFPFSGREDV-DEDCRRVSEALMXXXXXXXXXXXXXV 238
           R+R  PP+FL NL GSD  + G  +PFSG +D  DE+CRR+ E L              V
Sbjct: 180 RSRCPPPIFLCNLNGSDVGRGGHGYPFSGYDDRGDENCRRIGEKL----GKVKSLLLLGV 235

Query: 239 CAGDALNRFIECVNMDKEK--ILPSEISGLRVISIEKEIVEFVSEGG----KEREKMGLK 292
           CA DAL+RFIECVN D +   +LP EI GL V+SIEKEI+EFVSEGG    K +EKMG K
Sbjct: 236 CASDALSRFIECVNSDNKGGFLLPREIVGLSVVSIEKEIIEFVSEGGNDKEKAKEKMGFK 295

Query: 293 FEELRNELDQCSGPGVLLNVGELKGLVNKSDSIDDALSYLVSKLTGLVEGFRDKLWLMGA 352
           FEELRN+L+QC G GV+LN GELK LV+++    DA SYLV KLTGL+E FR+KLWLMGA
Sbjct: 296 FEELRNKLEQCLGVGVVLNFGELKVLVDENVFSSDAASYLVEKLTGLLEDFRNKLWLMGA 355

Query: 353 AAKHETYSKLLGQFPAIEKDWDLHILPITSSKSPFDCFGSKSR 395
           AA +ETYSK LG+FP+IEKDWDLH+LPITSSKSP D FGSKSR
Sbjct: 356 AATYETYSKFLGKFPSIEKDWDLHLLPITSSKSPIDTFGSKSR 398


>28162.m000124 conserved hypothetical protein
          Length = 1112

 Score =  355 bits (912), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 199/399 (49%), Positives = 264/399 (66%), Gaps = 19/399 (4%)

Query: 1   MPTPVSVARQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSILRDACARAR 60
           MPTPV  ARQCLT E                H+QTTSLHAVSALL++PSSILRDAC RAR
Sbjct: 1   MPTPVITARQCLTPEAAHALDEAVSVARRRGHSQTTSLHAVSALLSIPSSILRDACVRAR 60

Query: 61  NSPCSSRLQFRALELCVGVSLDRLSSSKTLEE-PPISNSLMAAIKRSQANQRRHPDNFHL 119
           NS  + RLQF+ALELC+ VSLDR+ +S+  E+ PP+SNSLMAAIKRSQANQRR P+NFHL
Sbjct: 61  NSAYTPRLQFKALELCLSVSLDRVPASQLSEQDPPVSNSLMAAIKRSQANQRRQPENFHL 120

Query: 120 -QQIHCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIKLAIIHPPVTPQAAK 178
            QQ  C+    S +KVEL+  ILSILDDP+VSRV GE+GFRS +IKLAI+ P   PQ  +
Sbjct: 121 YQQQQCSTTSVSCIKVELQNLILSILDDPVVSRVFGESGFRSSEIKLAIVRP--LPQVLR 178

Query: 179 FS-RTRYPPLFLYNLTGSDPVQPG----LSFPFSGREDVDEDCRRVSEALMXXXXXXXXX 233
            S R R PP+FL NL+      PG        FSG  D DE+CRR+ E L+         
Sbjct: 179 LSQRFRGPPMFLCNLSDHSDPGPGRRGFSFPFFSGFTDGDENCRRIGEVLV--RNKGRNP 236

Query: 234 XXXXVCAGDALNRFIECVNMDKEKILPSEISGLRVISIEKEIVEFVSEGGKEREKMGLKF 293
               VCA D L  F + V   K+ +LP E+SGLRVI IE ++++F SE   ++  + L+F
Sbjct: 237 LLVGVCAYDTLASFNQLVEKRKDYVLPVELSGLRVICIESDVMKFASENF-DKGCVDLRF 295

Query: 294 EELRNELDQCSGPGVLLNVGELKGLV-------NKSDSIDDALSYLVSKLTGLVEGFRDK 346
           EE+   ++Q  GPG+++N+G+LK  +       N S+ ++D +SY+V KLT +++ +  K
Sbjct: 296 EEVGRFVEQNLGPGLVVNLGDLKAFISSENDYSNSSNGLNDLMSYIVEKLTRMLQLYGRK 355

Query: 347 LWLMGAAAKHETYSKLLGQFPAIEKDWDLHILPITSSKS 385
           +WL+G  A +E Y K + +FP++EKDWDL +LPITS ++
Sbjct: 356 VWLIGTTASYEGYLKFVSRFPSVEKDWDLQLLPITSFRT 394


>30184.m001167 conserved hypothetical protein
          Length = 864

 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 185/416 (44%), Gaps = 65/416 (15%)

Query: 1   MPTPVSVARQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSILRDACARAR 60
           M   +   +Q LT E                HAQ T LH  SA+LA  + +LR AC ++ 
Sbjct: 1   MRAGICSVQQALTAEAANIVKQAVSLARRRGHAQVTPLHVASAMLASTNGLLRRACLQSH 60

Query: 61  NSPCSSRLQFRALELCVGVSLDRL--SSSKTL-----EEPPISNSLMAAIKRSQANQRRH 113
           + P    LQ +ALELC  V+L+RL  S+S  L       P +SN+L+AA KR+QA+QRR 
Sbjct: 61  SHP----LQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRG 116

Query: 114 PDNFHLQQIHCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIK--------L 165
                   I   QQP   LK+E++  I+SILDDP VSRV+ EAGF S  +K        L
Sbjct: 117 -------SIENQQQPILALKIEIEQLIISILDDPSVSRVMREAGFSSTQVKNKVEQAVSL 169

Query: 166 AIIHPPVTPQAAKFSRTRYPPLFLYNLTGSDPVQPGLSFPFSG--------REDVDEDCR 217
            I     T  + +      P +F      ++ V P L F   G         E  ++D  
Sbjct: 170 EICSQGTTATSCQSKEITKPQIF-----STNNVSPSLPFSHYGVTLSKPLDHEVSNDDVM 224

Query: 218 RVSEALMXXXXXXXXXXXXXVCAGDALNRFIECVNMDKEKI----LPSEISGLRVISIEK 273
            V   LM             +  G+ L      V +   KI     P E+  +R IS   
Sbjct: 225 SVLNTLM-------EKKRNTIITGECLASTESVVRLVMNKIERGLAPGELRAMRFISF-- 275

Query: 274 EIVEFVSEGGKEREKMGLKFEELRNELDQCSGPGVLLNVGELKGLV-------NKSDSID 326
                +S     +E++  K  ELR  +      GV L +G++K +         +  S  
Sbjct: 276 ---PLISLRDLPQEEVEQKLVELRCTVKSYLNRGVFLYLGDIKWVAEFWSEYGEQRRSYY 332

Query: 327 DALSYLVSKLTGLVEGF--RDKLWLMGAAAKHETYSKLLGQFPAIEKDWDLHILPI 380
            +  Y++ +L  L+ G    ++LWLMG A   +TY K     P++E  W+L+ LPI
Sbjct: 333 CSGEYIIMELKRLIRGIGETERLWLMGVAT-FQTYMKCKSGRPSLETIWELYPLPI 387


>30063.m001446 conserved hypothetical protein
          Length = 1008

 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 193/429 (44%), Gaps = 50/429 (11%)

Query: 1   MPTPVSVARQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSILRDACARAR 60
           M +     +Q LT E                HAQ T LH  + LL+  +S+LR AC +++
Sbjct: 1   MRSGACTVQQTLTAEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60

Query: 61  NSPCSSRLQFRALELCVGVSLDRLSSSKT---LEEPPISNSLMAAIKRSQANQRRHPDNF 117
               S  LQ RALELC  V+L+RL ++       +P +SN+L+AA+KR+QA+QRR     
Sbjct: 61  PHQNSHPLQCRALELCFNVALNRLPTTPGPLLHGQPSLSNALIAALKRAQAHQRRGC--I 118

Query: 118 HLQQIHCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIKLAI-------IHP 170
             QQ    QQP   +KVEL+  I+SILDDP VSRV+ EAGF S  +K  I       +  
Sbjct: 119 EQQQ----QQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTSVKSNIEDSSASSVFQ 174

Query: 171 PVTPQAAKFSRTRYP---------------PLFLYNLTGSDPV----QPGLSFPF--SGR 209
             T     FS    P                 FL      +P+    Q  LS  +     
Sbjct: 175 CYTTSGGVFSSPSSPGETHREIINPTSFWQTHFLSYSAEKNPLLFSPQKKLSTNYFTDSS 234

Query: 210 EDVDEDCRRVSEALMXXXXXXXXXXXXXVCAGDALNRFIECVNMDKEKILPSEISGLRVI 269
             V ED + V E  +             V   + L    E +   +   +P+E+  ++ +
Sbjct: 235 ASVKEDIKLVFEVFLRKKKKNTVIVGDRVSITEGL--VGELMGRVERGEVPAELKQIQFV 292

Query: 270 SIEKEIVEFVSEGGKEREKMGLKFEELRNELDQCSGPGVLLNVGELKGLVNKSDSIDDAL 329
             +      VS    ++E + +   +L+ ++D     GV++  G+LK  V +S +I+   
Sbjct: 293 KFQ---FAPVSLRFMKKEDVEMNITQLKRKVDSIGDSGVIIYTGDLKWTVEES-AINGEY 348

Query: 330 S---YLVSKLTGLVEGF---RDKLWLMGAAAKHETYSKLLGQFPAIEKDWDLHILPITSS 383
           S   +LV++   L+  +     ++WLM A A ++TY +   + P++E +W L  + + S 
Sbjct: 349 SPVDHLVAETGRLLSDYSCSNARVWLM-ATANYQTYMRCQMRQPSLEIEWALQAVSVPSG 407

Query: 384 KSPFDCFGS 392
                  GS
Sbjct: 408 GLGLSLHGS 416


>29439.m000215 conserved hypothetical protein
          Length = 882

 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 91/166 (54%), Gaps = 19/166 (11%)

Query: 7   VARQCLTDEXXXXXXXXXXXXXXXSHAQTTSLHAVSALLALPSSILRDACARARNSPCSS 66
             +Q LT E                HAQ T LH  + +L+  + +LR AC ++ + P   
Sbjct: 7   TVQQALTTEAATVVKQAVTLARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSHSHP--- 63

Query: 67  RLQFRALELCVGVSLDRLSSSKT--------LEEPPISNSLMAAIKRSQANQRRHPDNFH 118
            LQ +ALELC  V+L+RL +S +         + P ISN+L+AA KR+QA+QRR      
Sbjct: 64  -LQCKALELCFNVALNRLPASTSSPVLGTHAQQYPSISNALVAAFKRAQAHQRRGS---- 118

Query: 119 LQQIHCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGFRSCDIK 164
              I   QQP   +K+EL+  I+SILDDP VSRV+ EAGF S  +K
Sbjct: 119 ---IENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVK 161



 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 286 REKMGLKFEELRNELDQCSGPGVLLNVGELKGLVNKSDSIDDALSYLVSKLTGLVEGFRD 345
           R ++  K EEL+  +      GV+LN+G+LK +V    +    + +++ ++  L  G  +
Sbjct: 291 RVEVDQKLEELKVHIRSYLSKGVVLNLGDLKWVVEYRANNLSPMEHMIMEIGKLASGISE 350

Query: 346 ---KLWLMGAAAKHETYSKLLGQFPAIEKDWDLHILPI 380
              K WL G A   +TY K     P++E  W LH L I
Sbjct: 351 NNGKFWLTGIAT-FQTYMKCKSGNPSLETVWGLHALTI 387


>28863.m000092 ATP binding protein, putative
          Length = 983

 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 9/69 (13%)

Query: 100 MAAIKRSQANQRRH-PDNFHLQQIHCNQQPPSVLKVELKYFILSILDDPIVSRVLGEAGF 158
           MAA+KR+QA+QRR  P+          QQP   +KVEL+  I+SILDDP VSRV+ EA F
Sbjct: 1   MAALKRAQAHQRRGCPEQ--------QQQPLLAVKVELEQLIISILDDPSVSRVMREASF 52

Query: 159 RSCDIKLAI 167
            S  +K  I
Sbjct: 53  SSPAVKATI 61