Jatropha Genome Database

JcCA0289051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0289051.10 - phase: 0 
         (259 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30205.m001606 chaperonin containing t-complex protein 1, zeta su...   409   e-115
29929.m004774 chaperonin containing t-complex protein 1, epsilon...    70   1e-12
30170.m014313 chaperonin containing t-complex protein 1, beta su...    69   2e-12
30051.m000523 chaperonin containing t-complex protein 1, alpha s...    63   1e-10
29656.m000497 chaperonin containing t-complex protein 1, gamma s...    57   7e-09

>30205.m001606 chaperonin containing t-complex protein 1, zeta
           subunit, tcpz, putative
          Length = 535

 Score =  409 bits (1051), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 195/220 (88%), Positives = 201/220 (91%)

Query: 1   MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFF 60
           MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY+KSEINAGFF
Sbjct: 193 MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYDKSEINAGFF 252

Query: 61  YSNAEQREAMVAAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXX 120
           YSNAEQRE MVAAERRQVDERV++IIELKNKVCSGNDNNFVVINQKGIDPPS        
Sbjct: 253 YSNAEQREKMVAAERRQVDERVEKIIELKNKVCSGNDNNFVVINQKGIDPPSLDLLARAG 312

Query: 121 XXXXXXXXXXNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNP 180
                     NMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVE+VKNP
Sbjct: 313 IIALRRAKRRNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVEHVKNP 372

Query: 181 HSCTILIKGPNDHTIAQIKDALRDGLRAVKNTIEDQAVVL 220
           HSCTILIKGPNDHTIAQIKDA+RDGLRAVKNTIED+AVVL
Sbjct: 373 HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVL 412


>29929.m004774 chaperonin containing t-complex protein 1, epsilon
           subunit, tcpe, putative
          Length = 535

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 11/208 (5%)

Query: 14  DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVAA 73
           DT L+ G+V+D    HP M +  E+  I       E  K +        + E+ + +   
Sbjct: 217 DTELIYGIVVDKDMSHPQMPKHIEDAKIAILTCPFEPPKPKTKHKVDIDSVEKFQTLRKQ 276

Query: 74  ERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNME 133
           E++  D+ V++        C  +    +VI Q G D  +                   +E
Sbjct: 277 EQQYFDDMVQK--------CK-DAGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELE 327

Query: 134 RLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILG--EEKYTFVENVKNPHSCTILIKGPN 191
            + +A GG  V    +LTP+ LG AG+V E   G  +++  ++E+  N  + TI I+G N
Sbjct: 328 LIAIATGGRIVPRFQELTPEKLGKAGMVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGN 387

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVV 219
              I + K ++ D L   +N I + ++V
Sbjct: 388 KMMIEETKRSIHDSLCVARNLIRNNSIV 415


>30170.m014313 chaperonin containing t-complex protein 1, beta
           subunit, tcpb, putative
          Length = 512

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 15/216 (6%)

Query: 14  DTRLVEGLVLDH--GSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMV 71
           D+ L EG +LD   G   P   +R EN  IL  N +++ +K +I       ++  R A +
Sbjct: 191 DSFLDEGFILDKKIGVGQP---KRIENAKILVANTAMDTDKVKIYGARVRVDSMSRVADI 247

Query: 72  -AAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXX 130
            AAE++++ E+V +II        G+  N  V  Q   + P                   
Sbjct: 248 EAAEKQKMREKVDKII--------GHGINCFVNRQLIYNFPEELFANAGILAIEHADFD- 298

Query: 131 NMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNPHSCTILIKGP 190
            +ERL L  GGE  ++ D+     LG   L+ E ++GE+K      V+   +CT++++G 
Sbjct: 299 GIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTVVLRGA 358

Query: 191 NDHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPH 226
           + H + + + +L D L  +  T+ D  V+L   +P 
Sbjct: 359 SHHVLDEAERSLHDALCVLSQTVNDSRVLLGGGWPE 394


>30051.m000523 chaperonin containing t-complex protein 1, alpha
           subunit, tcpa, putative
          Length = 546

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 17/234 (7%)

Query: 14  DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVAA 73
           D+ L+ G  L+ G     M  R     I   + +L+  K ++      ++  + E +   
Sbjct: 210 DSYLLNGYALNTGRAAQGMPTRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKI--- 266

Query: 74  ERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNME 133
            +R+VD   +RI     K+     N  VV+  KGID  +                  +M 
Sbjct: 267 RQREVDMTKERI----EKLLKAGAN--VVLTTKGIDDMALKYFVEAGAIAVRRVRKEDMR 320

Query: 134 RLVLACGGEAVNSVDDLT------PDCLGWAGLVYEHILGEEKYTFVENVKNPHSCTILI 187
            +  A GG  V++  D+       P  LG+A  V E  + ++    ++  K+  + ++++
Sbjct: 321 HVAKATGGTMVSTFADMEGDETFDPSLLGYADEVVEERIADDDVIMIKGTKSTSAVSLIL 380

Query: 188 KGPNDHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPHRNLRVGNWIKYFSAT 241
           +G ND+ + ++  AL D L  VK T+E   VV         L V  +++Y + T
Sbjct: 381 RGANDYMLDEMDRALHDALCIVKRTLESNTVVAGGGAVESALSV--YLEYLATT 432


>29656.m000497 chaperonin containing t-complex protein 1, gamma
           subunit, tcpg, putative
          Length = 554

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 105/239 (43%), Gaps = 15/239 (6%)

Query: 14  DTRLVEGLVLDHGSRHP-DMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVA 72
           D+++++G++ +     P  M+R+  N  I+  +  LEY+K E          E    ++ 
Sbjct: 209 DSKVLKGVMFNKDVVAPGKMRRKIVNPRIILLDCPLEYKKGENQTNAELVKEEDWAVLLK 268

Query: 73  AERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNM 132
            E   +     +I+  K  +         VI +KG+   +                  + 
Sbjct: 269 MEEEYIQNMCMQILTFKPDL---------VITEKGLSDLACHYLSRAGVGAIRRLRKTDN 319

Query: 133 ERLVLACGGEAVNSVDDLTPDCLG-WAGLVYEHILGEEKYTFVENVKNPHSCTILIKGPN 191
            R+  ACG   VN  ++L    +G  AGL     +G+E ++F+ + K+P +CT+L++G +
Sbjct: 320 NRIAKACGAVIVNRPEELQESDVGTGAGLFEVKKIGDEFFSFIVDCKDPKACTVLLRGAS 379

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPHRNLRVGNWIKYFSATDSSIQ--PY 248
              + +++  L+D +   +N +++    L+       L V   +K  S++   I+  PY
Sbjct: 380 KDLLNEVERNLQDAMSVARNILKNPK--LLPGGGATELTVSATLKQKSSSVEGIEKWPY 436