Jatropha Genome Database

JcCA0286161.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0286161.40 - phase: 0 /partial
         (93 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008759 amidase, putative                                       152   2e-38
29651.m000292 amidase, putative                                        88   1e-18
29806.m000976 amidase, putative                                        80   2e-16

>30128.m008759 amidase, putative
          Length = 500

 Score =  152 bits (385), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/88 (84%), Positives = 81/88 (92%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           +FGI+AIPTVPG  PKLNTDPTTLE+FRAKAFSLLSI GVSGFCQVSIPLGMHD LP+SI
Sbjct: 411 EFGIIAIPTVPGVPPKLNTDPTTLEIFRAKAFSLLSITGVSGFCQVSIPLGMHDGLPVSI 470

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQVA 88
           SLLAK+GSD FLLNVV+ LYDTLQE+V 
Sbjct: 471 SLLAKHGSDVFLLNVVETLYDTLQEEVC 498


>29651.m000292 amidase, putative
          Length = 589

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/87 (49%), Positives = 59/87 (67%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           D GIL IPT     PKL       E ++   FSLLSIA +SG CQV+IPLG+++  P+S+
Sbjct: 369 DDGILVIPTTAHLPPKLGGKDMLSEDYQILLFSLLSIASLSGCCQVTIPLGLYEKCPVSV 428

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQV 87
           S +A++G D FL++ VQ +Y +LQEQV
Sbjct: 429 SFIARHGGDRFLMDTVQNMYSSLQEQV 455


>29806.m000976 amidase, putative
          Length = 607

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/89 (44%), Positives = 57/89 (64%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           D GIL IPTV  P  KLNT          +   L SIA +SG CQV++PLG HDD P+S+
Sbjct: 386 DDGILVIPTVADPPLKLNTKKGYSPESHDRVIILSSIASMSGCCQVAVPLGKHDDCPISV 445

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQVAV 89
           S ++ +G+D FLL+ +  +Y +LQ Q+++
Sbjct: 446 SFISFHGADKFLLDTIVDMYLSLQAQISI 474