Jatropha Genome Database

JcCA0286161.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0286161.30 - phase: 0 /partial
         (209 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008760 mevalonate kinase, putative                             295   7e-81
29656.m000490 mevalonate kinase, putative                             286   3e-78

>30128.m008760 mevalonate kinase, putative
          Length = 386

 Score =  295 bits (756), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 154/209 (73%), Positives = 173/209 (82%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSFPTSENDGTLKLQLKDMALEF 60
           MEVKARAPGKIILSGEHAVVHGSTAVA++++LYTYV++SFP+S NDGTLKLQLKD+ALEF
Sbjct: 1   MEVKARAPGKIILSGEHAVVHGSTAVAAALDLYTYVSISFPSSGNDGTLKLQLKDLALEF 60

Query: 61  SWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFLWLY 120
           SWP+ KI+EALPNLG PS+STPTSCSIES+KSISALVEEQ+IPEAKIALASG++AFLWLY
Sbjct: 61  SWPVAKIREALPNLGVPSSSTPTSCSIESLKSISALVEEQDIPEAKIALASGVSAFLWLY 120

Query: 121 TSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGESE 180
           TSIQGF PATVVVTSD                            +VD+ HQGWL FG  +
Sbjct: 121 TSIQGFEPATVVVTSDLPLGSGLGSSAAYCVSLSAALLAFSDSVDVDRGHQGWLKFGVPD 180

Query: 181 LELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
           LELLNKWAFEGEK+IHGKPSGIDNTVSTY
Sbjct: 181 LELLNKWAFEGEKIIHGKPSGIDNTVSTY 209


>29656.m000490 mevalonate kinase, putative
          Length = 386

 Score =  286 bits (733), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 149/209 (71%), Positives = 168/209 (80%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTYVTLSFPTSENDGTLKLQLKDMALEF 60
           MEVKARAPGK+ILSGEHAVVHGSTAVA+SI+LYTYV+LSFP+S ND TLKLQLKD+AL+F
Sbjct: 1   MEVKARAPGKVILSGEHAVVHGSTAVAASIDLYTYVSLSFPSSGNDDTLKLQLKDLALDF 60

Query: 61  SWPIGKIKEALPNLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFLWLY 120
           SWPI +IKEALPNLG PS+STPTSCSIE +KS+SALVEEQN PEAKI LASG +AFLWLY
Sbjct: 61  SWPIARIKEALPNLGVPSSSTPTSCSIELIKSMSALVEEQNFPEAKIGLASGASAFLWLY 120

Query: 121 TSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFGESE 180
           TSIQGF+PATV+VTSD                            N+D+   GWL+FG  E
Sbjct: 121 TSIQGFKPATVIVTSDLPLGSGLGSSAAFCVALSAALLAFSDSVNLDREQHGWLMFGVPE 180

Query: 181 LELLNKWAFEGEKLIHGKPSGIDNTVSTY 209
           LELLNKWAFEGEK+IHGKPSGIDNT+STY
Sbjct: 181 LELLNKWAFEGEKIIHGKPSGIDNTISTY 209