Jatropha Genome Database

JcCA0286161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0286161.10 - phase: 0 
         (88 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008759 amidase, putative                                       155   3e-39
29806.m000976 amidase, putative                                        96   5e-21
29651.m000292 amidase, putative                                        91   2e-19

>30128.m008759 amidase, putative
          Length = 500

 Score =  155 bits (393), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/87 (81%), Positives = 80/87 (91%)

Query: 1   MARNPDYGAFMEKFVLKPTNSSDELPLNGLTFAVKDIFXVDGYVTGFGNPDWARTHLAAT 60
           MA +PDYGAFMEKFVLKP++SSD+LPL+ LTFAVKDIF VDGYVTGFGNPDWARTH AAT
Sbjct: 73  MAISPDYGAFMEKFVLKPSSSSDQLPLHSLTFAVKDIFDVDGYVTGFGNPDWARTHSAAT 132

Query: 61  STAPAVLAILREXATCIGKTVMDEMAY 87
           +TAPAVLA+LR  ATC+GK +MDEMAY
Sbjct: 133 ATAPAVLAVLRGGATCVGKVIMDEMAY 159


>29806.m000976 amidase, putative
          Length = 607

 Score = 95.5 bits (236), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 4/90 (4%)

Query: 1   MARNPDYGAFMEKFVL----KPTNSSDELPLNGLTFAVKDIFXVDGYVTGFGNPDWARTH 56
           M +  D+GAF+EKF +    +    + + PL+GL+FA+KDIF V  YVTGFGNPDW RTH
Sbjct: 45  MIKREDFGAFIEKFEILPFPQAPPPAAKQPLSGLSFAIKDIFDVKDYVTGFGNPDWRRTH 104

Query: 57  LAATSTAPAVLAILREXATCIGKTVMDEMA 86
             A   A AV A+L+  ATC+GKT+MDE+ 
Sbjct: 105 EVAEKMAVAVTALLKNGATCVGKTIMDELG 134


>29651.m000292 amidase, putative
          Length = 589

 Score = 90.5 bits (223), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/59 (66%), Positives = 49/59 (83%)

Query: 29  GLTFAVKDIFXVDGYVTGFGNPDWARTHLAATSTAPAVLAILREXATCIGKTVMDEMAY 87
           GLTFAV D+F ++GYVTGFG+PDWARTH AA+ T+  V A++   ATCIGKTV+DE+AY
Sbjct: 60  GLTFAVSDVFDIEGYVTGFGHPDWARTHEAASQTSLVVSALVEGGATCIGKTVVDELAY 118