Jatropha Genome Database

JcCA0284281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0284281.10 + phase: 0 /partial
         (156 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29726.m003891 lipoxygenase, putative                                  223   3e-59
30128.m008781 lipoxygenase, putative                                  171   9e-44
29680.m001710 lipoxygenase, putative                                  125   6e-30
30178.m000859 lipoxygenase, putative                                   51   3e-07

>29726.m003891 lipoxygenase, putative
          Length = 868

 Score =  223 bits (568), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 104/142 (73%), Positives = 116/142 (81%), Gaps = 1/142 (0%)

Query: 16  MEGCCCQTKTKAKG-MAEERFKIKGKVVLMKKNVLDFNDVTASCFDRIHELFGKGVSIQL 74
           ME  C Q + +  G    ERFKIKG VVLMKKNVLDF+D+ AS  DR+HEL GKGVS+QL
Sbjct: 1   MEVFCAQPRNQPNGGTVTERFKIKGTVVLMKKNVLDFSDIKASFLDRVHELLGKGVSMQL 60

Query: 75  ISAVNPDPENDLRGKHGKVAFLESWVKKITPMAAQETEFNITFDWDESMAVPGAFIIRNH 134
           ISAV+ DP N LRGK GKVA+LE WV+ ITP+ A +T FNITFDWDESM VPGAFIIRNH
Sbjct: 61  ISAVHHDPANKLRGKLGKVAYLEKWVRSITPITAVDTVFNITFDWDESMGVPGAFIIRNH 120

Query: 135 HHSQLYLKTVTLEDVPGHGRVH 156
           HHSQLYLKTVTL+DVPGHGRVH
Sbjct: 121 HHSQLYLKTVTLDDVPGHGRVH 142


>30128.m008781 lipoxygenase, putative
          Length = 871

 Score =  171 bits (434), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 78/121 (64%), Positives = 94/121 (77%)

Query: 36  KIKGKVVLMKKNVLDFNDVTASCFDRIHELFGKGVSIQLISAVNPDPENDLRGKHGKVAF 95
           KIKG VVLMKKNVLDFND  AS  D IHEL G GVS+QLIS+VN +PEN L+GK G+ A 
Sbjct: 28  KIKGTVVLMKKNVLDFNDFNASFLDGIHELAGHGVSLQLISSVNSEPENGLQGKVGEPAL 87

Query: 96  LESWVKKITPMAAQETEFNITFDWDESMAVPGAFIIRNHHHSQLYLKTVTLEDVPGHGRV 155
           LE W+   TP    ++ F +TFDWD+ + +PGAFIIRN+HHS+ YLKT+TLEDVPG GR+
Sbjct: 88  LEDWITTFTPATPGDSAFRVTFDWDDEIGIPGAFIIRNNHHSEFYLKTLTLEDVPGQGRI 147

Query: 156 H 156
           H
Sbjct: 148 H 148


>29680.m001710 lipoxygenase, putative
          Length = 865

 Score =  125 bits (315), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 36  KIKGKVVLMKK-NVLDFNDVTASCFDRIHELFGKGVSIQLISAVNPDPENDLRGKHGKVA 94
           KIKG V+LMKK N+L  +D  A   D I EL G  V ++LISA   DPE+  RG  G+ A
Sbjct: 27  KIKGTVLLMKKKNLLGHSDPEAFVHDFIDELKGNKVVLRLISAERGDPEDGHRGNLGRDA 86

Query: 95  FLESWVKKITPMAAQETEFNITFDWDESMAVPGAFIIRNHHHSQLYLKTVTLEDVPGHGR 154
           +LE W+       A E +F+ITFD +E + VPGAF IRN+HHS+ YLK+VTLEDVP HG 
Sbjct: 87  YLEKWISTFGHHEASEIKFHITFDLEEEIGVPGAFSIRNNHHSEFYLKSVTLEDVPDHGC 146

Query: 155 VH 156
           +H
Sbjct: 147 IH 148


>30178.m000859 lipoxygenase, putative
          Length = 852

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 67  GKGVSIQLISAVNPDPENDLRGKHGKVAFLESWVKKITPMAAQETEFNITFDWDESMAVP 126
           GK  SIQ+ S+   DP    RGK  K A+L+ + K       +   + I    D    +P
Sbjct: 46  GKSASIQIYSSTVLDPSTG-RGKLSKKAYLK-YGKSKKHSGTKTITYQIKLRMDPEFGIP 103

Query: 127 GAFIIRNHHHSQLYLKTVTLE 147
           GAF+I N H  + +L+T TLE
Sbjct: 104 GAFVIVNQHKHEFFLETATLE 124